RNA–Protein interactions for RNA: YLR199C

PBA1, Transcript of Protein involved in 20S proteasome assembly, yeastyeast

Gene PBA1, Length 831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBA1YLR199C TIF3P34167 436 aaKnown RBP3.51□□□□□ -1.85
PBA1YLR199C LOT5P34234 306 aa3.51□□□□□ -1.85
PBA1YLR199C MNN2P38069 597 aa3.51□□□□□ -1.85
PBA1YLR199C PCH2P38126 564 aa3.51□□□□□ -1.85
PBA1YLR199C PCL5P38794 229 aa3.51□□□□□ -1.85
PBA1YLR199C LNP1P38878 278 aa3.51□□□□□ -1.85
PBA1YLR199C VPS41P38959 992 aa3.51□□□□□ -1.85
PBA1YLR199C MRX1P40050 688 aa3.51□□□□□ -1.85
PBA1YLR199C BUR6P40096 142 aa3.51□□□□□ -1.85
PBA1YLR199C YIR042CP40586 236 aa3.51□□□□□ -1.85
PBA1YLR199C SWP82P43554 623 aa3.51□□□□□ -1.85
PBA1YLR199C MPS3P47069 682 aa3.51□□□□□ -1.85
PBA1YLR199C RPS7BP48164 190 aaKnown RBP3.51□□□□□ -1.85
PBA1YLR199C IMD4P50094 524 aaKnown RBP3.51□□□□□ -1.85
PBA1YLR199C SHE4P51534 789 aa3.51□□□□□ -1.85
PBA1YLR199C MNP1P53163 194 aaPredicted RBP3.51□□□□□ -1.85
PBA1YLR199C FHN1P53279 174 aa3.51□□□□□ -1.85
PBA1YLR199C SPC98P53540 846 aa3.51□□□□□ -1.85
PBA1YLR199C PDR16P53860 351 aaKnown RBP3.51□□□□□ -1.85
PBA1YLR199C YAT1P80235 687 aa3.51□□□□□ -1.85
PBA1YLR199C RSM28Q03430 361 aa3.51□□□□□ -1.85
PBA1YLR199C DON1Q05610 365 aa3.51□□□□□ -1.85
PBA1YLR199C UAF30Q08747 228 aa3.51□□□□□ -1.85
PBA1YLR199C BMS1Q08965 1183 aaKnown RBP3.51□□□□□ -1.85
PBA1YLR199C CFT2Q12102 859 aaPredicted RBP3.51□□□□□ -1.85
PBA1YLR199C HER1Q12276 1246 aa3.51□□□□□ -1.85
PBA1YLR199C SEC39Q12745 709 aa3.51□□□□□ -1.85
PBA1YLR199C YML133CQ03099 1374 aa3.51□□□□□ -1.85
PBA1YLR199C YLL067CQ07888 1374 aa3.51□□□□□ -1.85
PBA1YLR199C YLL066CQ99208 1374 aa3.51□□□□□ -1.85
PBA1YLR199C MF(ALPHA)1P01149 165 aa3.5□□□□□ -1.85
PBA1YLR199C OM45P16547 393 aa3.5□□□□□ -1.85
PBA1YLR199C APN1P22936 367 aa3.5□□□□□ -1.85
PBA1YLR199C RRP43P25359 394 aaPredicted RBP3.5□□□□□ -1.85
PBA1YLR199C PRD1P25375 712 aa3.5□□□□□ -1.85
PBA1YLR199C DAL80P26343 269 aa3.5□□□□□ -1.85
PBA1YLR199C HXT3P32466 567 aaKnown RBP3.5□□□□□ -1.85
PBA1YLR199C NIP1P32497 812 aaKnown RBP3.5□□□□□ -1.85
PBA1YLR199C CDC5P32562 705 aa3.5□□□□□ -1.85
PBA1YLR199C SSE1P32589 693 aaKnown RBP3.5□□□□□ -1.85
PBA1YLR199C RML2P32611 393 aa3.5□□□□□ -1.85
PBA1YLR199C YME2P32843 850 aa3.5□□□□□ -1.85
PBA1YLR199C HCS1P34243 683 aa3.5□□□□□ -1.85
PBA1YLR199C SLM4P38247 162 aa3.5□□□□□ -1.85
PBA1YLR199C WSS1P38838 269 aa3.5□□□□□ -1.85
PBA1YLR199C HRB1P38922 454 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
PBA1YLR199C ALT2P52892 507 aa3.5□□□□□ -1.85
PBA1YLR199C RHO5P53879 331 aaKnown RBP3.5□□□□□ -1.85
PBA1YLR199C RIA1P53893 1110 aa3.5□□□□□ -1.85
PBA1YLR199C ALF1P53904 254 aa3.5□□□□□ -1.85
PBA1YLR199C DAK1P54838 584 aaKnown RBP3.5□□□□□ -1.85
PBA1YLR199C MGR3Q04472 501 aa3.5□□□□□ -1.85
PBA1YLR199C PHO92Q06390 306 aa3.5□□□□□ -1.85
PBA1YLR199C MRI1Q06489 411 aaKnown RBP3.5□□□□□ -1.85
PBA1YLR199C RTC5Q12108 567 aaKnown RBP3.5□□□□□ -1.85
PBA1YLR199C YMR084WA2P2R3 262 aa3.49□□□□□ -1.85
PBA1YLR199C RPL6BP05739 176 aaKnown RBP3.49□□□□□ -1.85
PBA1YLR199C HIP1P06775 603 aa3.49□□□□□ -1.85
PBA1YLR199C GRR1P24814 1151 aa3.49□□□□□ -1.85
PBA1YLR199C YSP3P25036 478 aa3.49□□□□□ -1.85
PBA1YLR199C NIP100P33420 868 aa3.49□□□□□ -1.85
PBA1YLR199C NTR2P36118 322 aaPredicted RBP3.49□□□□□ -1.85
PBA1YLR199C CTP1P38152 299 aa3.49□□□□□ -1.85
PBA1YLR199C SEC31P38968 1273 aaKnown RBP3.49□□□□□ -1.85
PBA1YLR199C FUN12P39730 1002 aaKnown RBP3.49□□□□□ -1.85
PBA1YLR199C ALG5P40350 334 aa3.49□□□□□ -1.85
PBA1YLR199C CHS6P40955 746 aa3.49□□□□□ -1.85
PBA1YLR199C AMA1P50082 593 aa3.49□□□□□ -1.85
PBA1YLR199C MUP1P50276 574 aa3.49□□□□□ -1.85
PBA1YLR199C CUE3P53137 624 aaKnown RBP3.49□□□□□ -1.85
PBA1YLR199C MLC1P53141 149 aa3.49□□□□□ -1.85
PBA1YLR199C IPI3P53877 555 aa3.49□□□□□ -1.85
PBA1YLR199C RPL6AQ02326 176 aaKnown RBP3.49□□□□□ -1.85
PBA1YLR199C YLH47Q06493 454 aa3.49□□□□□ -1.85
PBA1YLR199C SWA2Q06677 668 aa3.49□□□□□ -1.85
PBA1YLR199C NOP6Q07623 225 aaKnown RBP3.49□□□□□ -1.85
PBA1YLR199C VPS54Q12071 889 aa3.49□□□□□ -1.85
PBA1YLR199C SGT2Q12118 346 aaKnown RBP3.49□□□□□ -1.85
PBA1YLR199C BAG7Q12128 409 aa3.49□□□□□ -1.85
PBA1YLR199C LEU9Q12166 604 aaKnown RBP3.49□□□□□ -1.85
PBA1YLR199C YPK9Q12697 1472 aa3.48□□□□□ -1.85
PBA1YLR199C COX1P00401 534 aa3.48□□□□□ -1.85
PBA1YLR199C LPD1P09624 499 aaKnown RBP3.48□□□□□ -1.85
PBA1YLR199C MRP13P12686 339 aa3.48□□□□□ -1.85
PBA1YLR199C PPH22P23595 377 aa3.48□□□□□ -1.85
PBA1YLR199C ADH7P25377 361 aa3.48□□□□□ -1.85
PBA1YLR199C YUR1P26725 428 aa3.48□□□□□ -1.85
PBA1YLR199C IDH2P28241 369 aaKnown RBP3.48□□□□□ -1.85
PBA1YLR199C SIP1P32578 815 aa3.48□□□□□ -1.85
PBA1YLR199C IME2P32581 645 aa3.48□□□□□ -1.85
PBA1YLR199C SSE2P32590 693 aaKnown RBP3.48□□□□□ -1.85
PBA1YLR199C SRB2P34162 210 aa3.48□□□□□ -1.85
PBA1YLR199C ELF1P36053 145 aa3.48□□□□□ -1.85
PBA1YLR199C TUL1P36096 758 aa3.48□□□□□ -1.85
PBA1YLR199C YBR053CP38235 358 aa3.48□□□□□ -1.85
PBA1YLR199C YHR131CP38835 850 aa3.48□□□□□ -1.85
PBA1YLR199C SER3P40054 469 aa3.48□□□□□ -1.85
PBA1YLR199C YIL089WP40500 205 aa3.48□□□□□ -1.85
PBA1YLR199C SEC27P41811 889 aaKnown RBP3.48□□□□□ -1.85
PBA1YLR199C SMC3P47037 1230 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms