RNA–Protein interactions for RNA: YGL003C

CDH1, Transcript of Activator of anaphase-promoting complex/cyclosome (APC/C), yeastyeast

Gene CDH1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDH1YGL003C SAK1P38990 1142 aa3.19□□□□□ -1.9
CDH1YGL003C SUR2P38992 349 aa3.19□□□□□ -1.9
CDH1YGL003C YER130CP39959 443 aa3.19□□□□□ -1.9
CDH1YGL003C YER010CP40011 234 aa3.19□□□□□ -1.9
CDH1YGL003C SCS2P40075 244 aaKnown RBP3.19□□□□□ -1.9
CDH1YGL003C FET5P43561 622 aa3.19□□□□□ -1.9
CDH1YGL003C TAF4P50105 388 aa3.19□□□□□ -1.9
CDH1YGL003C MIG2P53035 382 aa3.19□□□□□ -1.9
CDH1YGL003C CAF130P53280 1122 aaPredicted RBP3.19□□□□□ -1.9
CDH1YGL003C ARC35P53731 342 aaKnown RBP3.19□□□□□ -1.9
CDH1YGL003C PDR16P53860 351 aaKnown RBP3.19□□□□□ -1.9
CDH1YGL003C KTR6P54070 446 aa3.19□□□□□ -1.9
CDH1YGL003C ORC4P54791 529 aa3.19□□□□□ -1.9
CDH1YGL003C YKR005CQ02203 525 aa3.19□□□□□ -1.9
CDH1YGL003C MUB1Q03162 620 aa3.19□□□□□ -1.9
CDH1YGL003C GTB1Q04924 702 aa3.19□□□□□ -1.9
CDH1YGL003C SPC2Q04969 178 aa3.19□□□□□ -1.9
CDH1YGL003C VAC14Q06708 880 aa3.19□□□□□ -1.9
CDH1YGL003C LUC7Q07508 261 aaPredicted RBP3.19□□□□□ -1.9
CDH1YGL003C RTT109Q07794 436 aa3.19□□□□□ -1.9
CDH1YGL003C TMA16Q08687 178 aa3.19□□□□□ -1.9
CDH1YGL003C HFI1Q12060 488 aa3.19□□□□□ -1.9
CDH1YGL003C YPR027CQ12079 277 aa3.19□□□□□ -1.9
CDH1YGL003C DCS2Q12123 353 aa3.19□□□□□ -1.9
CDH1YGL003C IES3Q12345 250 aa3.19□□□□□ -1.9
CDH1YGL003C SWM1Q12379 170 aa3.19□□□□□ -1.9
CDH1YGL003C HTZ1Q12692 134 aaKnown RBP3.19□□□□□ -1.9
CDH1YGL003C RPS21BQ3E754 87 aaKnown RBP3.19□□□□□ -1.9
CDH1YGL003C RPO41P13433 1351 aaKnown RBP3.18□□□□□ -1.9
CDH1YGL003C SOD2P00447 233 aa3.18□□□□□ -1.9
CDH1YGL003C RPS3P05750 240 aaKnown RBP3.18□□□□□ -1.9
CDH1YGL003C RPS9BP05755 195 aaKnown RBP3.18□□□□□ -1.9
CDH1YGL003C TPK1P06244 397 aa3.18□□□□□ -1.9
CDH1YGL003C HIS3P06633 220 aa3.18□□□□□ -1.9
CDH1YGL003C STE3P06783 470 aa3.18□□□□□ -1.9
CDH1YGL003C ADE3P07245 946 aaKnown RBP3.18□□□□□ -1.9
CDH1YGL003C GPA1P08539 472 aa3.18□□□□□ -1.9
CDH1YGL003C PRP2P20095 876 aaPredicted RBP3.18□□□□□ -1.9
CDH1YGL003C ATP12P22135 325 aa3.18□□□□□ -1.9
CDH1YGL003C MRPL8P22353 238 aa3.18□□□□□ -1.9
CDH1YGL003C YCR016WP25617 290 aaKnown RBP3.18□□□□□ -1.9
CDH1YGL003C MAC1P35192 417 aa3.18□□□□□ -1.9
CDH1YGL003C YPT52P36018 234 aaKnown RBP3.18□□□□□ -1.9
CDH1YGL003C NTC20P38302 140 aaPredicted RBP3.18□□□□□ -1.9
CDH1YGL003C RTC3P38804 111 aaPredicted RBP3.18□□□□□ -1.9
CDH1YGL003C MPT5P39016 859 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
CDH1YGL003C ULP2P40537 1034 aaPredicted RBP3.18□□□□□ -1.9
CDH1YGL003C ALK1P43633 760 aaKnown RBP3.18□□□□□ -1.9
CDH1YGL003C ABM1P47146 123 aa3.18□□□□□ -1.9
CDH1YGL003C ASK10P48361 1146 aa3.18□□□□□ -1.9
CDH1YGL003C HSH155P49955 971 aaKnown RBP3.18□□□□□ -1.9
CDH1YGL003C SPT20P50875 604 aa3.18□□□□□ -1.9
CDH1YGL003C RIM8P53179 542 aa3.18□□□□□ -1.9
CDH1YGL003C CUL3P53202 744 aa3.18□□□□□ -1.9
CDH1YGL003C MOT3P54785 490 aaKnown RBP3.18□□□□□ -1.9
CDH1YGL003C GPD1Q00055 391 aaKnown RBP3.18□□□□□ -1.9
CDH1YGL003C RPT6Q01939 405 aaKnown RBP3.18□□□□□ -1.9
CDH1YGL003C YHM2Q04013 314 aa3.18□□□□□ -1.9
CDH1YGL003C MUS81Q04149 632 aaPredicted RBP3.18□□□□□ -1.9
CDH1YGL003C RBS1Q05672 457 aaKnown RBP3.18□□□□□ -1.9
CDH1YGL003C YLR455WQ06188 304 aa3.18□□□□□ -1.9
CDH1YGL003C VIK1Q12045 647 aa3.18□□□□□ -1.9
CDH1YGL003C DIN7Q12086 430 aa3.18□□□□□ -1.9
CDH1YGL003C GPR1Q12361 961 aa3.18□□□□□ -1.9
CDH1YGL003C NPC2Q12408 173 aa3.18□□□□□ -1.9
CDH1YGL003C ZRT2Q12436 422 aa3.18□□□□□ -1.9
CDH1YGL003C GRX6Q12438 231 aa3.18□□□□□ -1.9
CDH1YGL003C OCA6Q12454 224 aa3.18□□□□□ -1.9
CDH1YGL003C ARG81P05085 880 aa3.17□□□□□ -1.9
CDH1YGL003C RPS13P05756 151 aaKnown RBP3.17□□□□□ -1.9
CDH1YGL003C SSC1P0CS90 654 aaKnown RBP3.17□□□□□ -1.9
CDH1YGL003C GUK1P15454 187 aaKnown RBP3.17□□□□□ -1.9
CDH1YGL003C PRP22P24384 1145 aaKnown RBP3.17□□□□□ -1.9
CDH1YGL003C OCA4P25366 362 aa3.17□□□□□ -1.9
CDH1YGL003C BOS1P25385 244 aa3.17□□□□□ -1.9
CDH1YGL003C TPS2P31688 896 aaKnown RBP3.17□□□□□ -1.9
CDH1YGL003C RPC34P32910 317 aa3.17□□□□□ -1.9
CDH1YGL003C TSA1P34760 196 aaKnown RBP3.17□□□□□ -1.9
CDH1YGL003C GCS1P35197 352 aa3.17□□□□□ -1.9
CDH1YGL003C GLG1P36143 616 aa3.17□□□□□ -1.9
CDH1YGL003C YKR075CP36155 307 aa3.17□□□□□ -1.9
CDH1YGL003C FAT1P38225 669 aa3.17□□□□□ -1.9
CDH1YGL003C FZO1P38297 855 aa3.17□□□□□ -1.9
CDH1YGL003C UME6P39001 836 aa3.17□□□□□ -1.9
CDH1YGL003C SAW1P39735 261 aa3.17□□□□□ -1.9
CDH1YGL003C YEL025CP39991 1188 aa3.17□□□□□ -1.9
CDH1YGL003C MSS2P40990 351 aa3.17□□□□□ -1.9
CDH1YGL003C TFG2P41896 400 aaPredicted RBP3.17□□□□□ -1.9
CDH1YGL003C SSU1P41930 458 aa3.17□□□□□ -1.9
CDH1YGL003C PFA3P42836 336 aa3.17□□□□□ -1.9
CDH1YGL003C PIB2P53191 635 aa3.17□□□□□ -1.9
CDH1YGL003C ZPR1P53303 486 aaKnown RBP3.17□□□□□ -1.9
CDH1YGL003C MNT4P53745 580 aa3.17□□□□□ -1.9
CDH1YGL003C VPS75P53853 264 aa3.17□□□□□ -1.9
CDH1YGL003C ESBP6P53918 673 aa3.17□□□□□ -1.9
CDH1YGL003C SMA1Q02651 245 aa3.17□□□□□ -1.9
CDH1YGL003C RTT103Q05543 409 aa3.17□□□□□ -1.9
CDH1YGL003C MSC3Q05812 728 aa3.17□□□□□ -1.9
CDH1YGL003C YLR224WQ05947 369 aa3.17□□□□□ -1.9
CDH1YGL003C YLR456WQ06199 204 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms