RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W PSD1P39006 500 aa2.53□□□□□ -2
NIC96YFR002W GIS2P53849 153 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
NIC96YFR002W RTT103Q05543 409 aa2.53□□□□□ -2
NIC96YFR002W BSC1Q12140 328 aa2.53□□□□□ -2
NIC96YFR002W KRS1P15180 591 aaKnown RBP2.53□□□□□ -2
NIC96YFR002W DBF20P32328 564 aa2.53□□□□□ -2
NIC96YFR002W PFK26P40433 827 aaKnown RBP2.53□□□□□ -2
NIC96YFR002W IST3P40565 148 aaPredicted RBP2.53□□□□□ -2
NIC96YFR002W IAH1P41734 238 aa2.53□□□□□ -2
NIC96YFR002W BNA1P47096 177 aa2.53□□□□□ -2
NIC96YFR002W FCP1Q03254 732 aa2.53□□□□□ -2
NIC96YFR002W ERG8P24521 451 aa2.52□□□□□ -2.01
NIC96YFR002W RPN12P32496 274 aa2.52□□□□□ -2.01
NIC96YFR002W ESL2P36168 1195 aa2.52□□□□□ -2.01
NIC96YFR002W REG1Q00816 1014 aa2.52□□□□□ -2.01
NIC96YFR002W GIR2Q03768 265 aaPredicted RBP2.52□□□□□ -2.01
NIC96YFR002W YLR352WQ06479 807 aa2.52□□□□□ -2.01
NIC96YFR002W YDL218WQ07629 317 aa2.52□□□□□ -2.01
NIC96YFR002W PSK2Q08217 1101 aa2.52□□□□□ -2.01
NIC96YFR002W ATG9Q12142 997 aa2.52□□□□□ -2.01
NIC96YFR002W GUK1P15454 187 aaKnown RBP2.52□□□□□ -2.01
NIC96YFR002W RPN2P32565 945 aaKnown RBP2.52□□□□□ -2.01
NIC96YFR002W STV1P37296 890 aa2.52□□□□□ -2.01
NIC96YFR002W NOC2P39744 710 aaKnown RBP2.52□□□□□ -2.01
NIC96YFR002W YIL060WP40519 144 aa2.52□□□□□ -2.01
NIC96YFR002W YOR019WQ99248 730 aa2.52□□□□□ -2.01
NIC96YFR002W NUP192P47054 1683 aa2.52□□□□□ -2.01
NIC96YFR002W RPB8P20436 146 aa2.51□□□□□ -2.01
NIC96YFR002W YJL070CP40361 888 aa2.51□□□□□ -2.01
NIC96YFR002W SMK1P41808 388 aa2.51□□□□□ -2.01
NIC96YFR002W PKP2P53170 491 aa2.51□□□□□ -2.01
NIC96YFR002W NUP100Q02629 959 aa2.51□□□□□ -2.01
NIC96YFR002W ERG27Q12452 347 aaKnown RBP2.51□□□□□ -2.01
NIC96YFR002W GID7P25569 745 aa2.51□□□□□ -2.01
NIC96YFR002W GAC1P28006 793 aa2.51□□□□□ -2.01
NIC96YFR002W RAD16P31244 790 aa2.51□□□□□ -2.01
NIC96YFR002W MIA40P36046 403 aa2.51□□□□□ -2.01
NIC96YFR002W PHO90P39535 881 aa2.51□□□□□ -2.01
NIC96YFR002W PKP1P40530 394 aa2.51□□□□□ -2.01
NIC96YFR002W YIR014WP40570 242 aa2.51□□□□□ -2.01
NIC96YFR002W ADE13Q05911 482 aaKnown RBP2.51□□□□□ -2.01
NIC96YFR002W TRM8Q12009 286 aa2.51□□□□□ -2.01
NIC96YFR002W NFU1P32860 256 aa2.5□□□□□ -2.01
NIC96YFR002W MRS6P32864 603 aaKnown RBP2.5□□□□□ -2.01
NIC96YFR002W XRS2P33301 854 aa2.5□□□□□ -2.01
NIC96YFR002W VPS4P52917 437 aa2.5□□□□□ -2.01
NIC96YFR002W IST1P53843 298 aaPredicted RBP2.5□□□□□ -2.01
NIC96YFR002W YMR178WQ03219 274 aaKnown RBP2.5□□□□□ -2.01
NIC96YFR002W GLN3P18494 730 aa2.5□□□□□ -2.01
NIC96YFR002W RIM2P38127 377 aa2.5□□□□□ -2.01
NIC96YFR002W SEC24P40482 926 aaKnown RBP2.5□□□□□ -2.01
NIC96YFR002W NNF2P53253 936 aa2.5□□□□□ -2.01
NIC96YFR002W SCW10Q04951 389 aa2.5□□□□□ -2.01
NIC96YFR002W DAP1Q12091 152 aa2.5□□□□□ -2.01
NIC96YFR002W RRI2Q12348 645 aa2.5□□□□□ -2.01
NIC96YFR002W CSR2Q12734 1121 aa2.5□□□□□ -2.01
NIC96YFR002W RAD9P14737 1309 aa2.5□□□□□ -2.01
NIC96YFR002W FKS3Q04952 1785 aa2.5□□□□□ -2.01
NIC96YFR002W PMS1P14242 873 aa2.49□□□□□ -2.01
NIC96YFR002W AZF1P41696 914 aa2.49□□□□□ -2.01
NIC96YFR002W GUF1P46943 645 aa2.49□□□□□ -2.01
NIC96YFR002W YML131WQ03102 365 aa2.49□□□□□ -2.01
NIC96YFR002W ATG26Q06321 1198 aa2.49□□□□□ -2.01
NIC96YFR002W TIP41Q12199 356 aa2.49□□□□□ -2.01
NIC96YFR002W YLR419WQ06698 1435 aaKnown RBP2.49□□□□□ -2.01
NIC96YFR002W HXK2P04807 486 aaKnown RBP2.49□□□□□ -2.01
NIC96YFR002W SNF1P06782 633 aaKnown RBP2.49□□□□□ -2.01
NIC96YFR002W SSH4P32343 579 aa2.49□□□□□ -2.01
NIC96YFR002W TRS65P32893 560 aa2.49□□□□□ -2.01
NIC96YFR002W TEF4P36008 412 aaKnown RBP2.49□□□□□ -2.01
NIC96YFR002W YER130CP39959 443 aa2.49□□□□□ -2.01
NIC96YFR002W RGI2P40188 164 aa2.49□□□□□ -2.01
NIC96YFR002W IME4P41833 600 aa2.49□□□□□ -2.01
NIC96YFR002W DPB11P47027 764 aaPredicted RBP2.49□□□□□ -2.01
NIC96YFR002W CRZ1P53968 678 aa2.49□□□□□ -2.01
NIC96YFR002W YDR415CQ04033 374 aaPredicted RBP2.49□□□□□ -2.01
NIC96YFR002W RPB2P08518 1224 aaKnown RBP2.48□□□□□ -2.01
NIC96YFR002W YML002WP0CF17 737 aa2.48□□□□□ -2.01
NIC96YFR002W PGS1P25578 521 aa2.48□□□□□ -2.01
NIC96YFR002W PTH2P34222 208 aa2.48□□□□□ -2.01
NIC96YFR002W ERG7P38604 731 aa2.48□□□□□ -2.01
NIC96YFR002W SAP185P40856 1058 aa2.48□□□□□ -2.01
NIC96YFR002W ZDS2P54786 942 aa2.48□□□□□ -2.01
NIC96YFR002W MDM1Q01846 1127 aa2.48□□□□□ -2.01
NIC96YFR002W VID22Q05934 901 aa2.48□□□□□ -2.01
NIC96YFR002W SSP2Q08646 371 aa2.48□□□□□ -2.01
NIC96YFR002W YOL087CQ99247 1116 aa2.48□□□□□ -2.01
NIC96YFR002W CDC15P27636 974 aa2.48□□□□□ -2.01
NIC96YFR002W MFT1P33441 392 aaKnown RBP2.48□□□□□ -2.01
NIC96YFR002W SPC34P36131 295 aa2.48□□□□□ -2.01
NIC96YFR002W FMP10P40098 244 aa2.48□□□□□ -2.01
NIC96YFR002W RIC1P40395 1056 aa2.48□□□□□ -2.01
NIC96YFR002W INP53Q12271 1107 aa2.48□□□□□ -2.01
NIC96YFR002W YLR302CO13544 120 aa2.47□□□□□ -2.01
NIC96YFR002W HSC82P15108 705 aaKnown RBP2.47□□□□□ -2.01
NIC96YFR002W SNU114P36048 1008 aaKnown RBP2.47□□□□□ -2.01
NIC96YFR002W SMC3P47037 1230 aa2.47□□□□□ -2.01
NIC96YFR002W PIL1P53252 339 aaKnown RBP2.47□□□□□ -2.01
NIC96YFR002W PSR2Q07949 397 aa2.47□□□□□ -2.01
NIC96YFR002W YBR298C-AQ8TGK4 73 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms