RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W PUT2P07275 575 aa3.04□□□□□ -1.92
SHS1YDL225W CBS1P14066 229 aa3.04□□□□□ -1.92
SHS1YDL225W IMG1P25626 169 aa3.04□□□□□ -1.92
SHS1YDL225W YPK3P38070 525 aa3.04□□□□□ -1.92
SHS1YDL225W ICS2P38284 255 aa3.04□□□□□ -1.92
SHS1YDL225W NPR2P39923 615 aa3.04□□□□□ -1.92
SHS1YDL225W NDE1P40215 560 aa3.04□□□□□ -1.92
SHS1YDL225W RBG2P53295 368 aaKnown RBP3.04□□□□□ -1.92
SHS1YDL225W VPS75P53853 264 aa3.04□□□□□ -1.92
SHS1YDL225W MPS1P54199 764 aa3.04□□□□□ -1.92
SHS1YDL225W YPL068CQ02749 293 aa3.04□□□□□ -1.92
SHS1YDL225W SNA4Q07549 140 aa3.04□□□□□ -1.92
SHS1YDL225W YFL068WP0CX99 160 aa3.03□□□□□ -1.92
SHS1YDL225W YLL066W-AP0CY00 160 aa3.03□□□□□ -1.92
SHS1YDL225W YLL067W-AP0CY01 160 aa3.03□□□□□ -1.92
SHS1YDL225W BOS1P25385 244 aa3.03□□□□□ -1.92
SHS1YDL225W ATO2P32907 282 aa3.03□□□□□ -1.92
SHS1YDL225W YBL055CP34220 418 aaPredicted RBP3.03□□□□□ -1.92
SHS1YDL225W YKL100CP34248 587 aa3.03□□□□□ -1.92
SHS1YDL225W NUP133P36161 1157 aa3.03□□□□□ -1.92
SHS1YDL225W ROT2P38138 954 aa3.03□□□□□ -1.92
SHS1YDL225W PHO90P39535 881 aa3.03□□□□□ -1.92
SHS1YDL225W SGN1P40561 250 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
SHS1YDL225W PYK2P52489 506 aaKnown RBP3.03□□□□□ -1.92
SHS1YDL225W YNL181WP53878 407 aa3.03□□□□□ -1.92
SHS1YDL225W NUP100Q02629 959 aa3.03□□□□□ -1.92
SHS1YDL225W TDA9Q04545 1251 aa3.03□□□□□ -1.92
SHS1YDL225W YMR034CQ05131 434 aaPredicted RBP3.03□□□□□ -1.92
SHS1YDL225W MLH2Q07980 695 aa3.03□□□□□ -1.92
SHS1YDL225W ETT1Q08421 412 aaKnown RBP3.03□□□□□ -1.92
SHS1YDL225W BUD7Q08754 746 aa3.03□□□□□ -1.92
SHS1YDL225W RTP1Q12751 981 aa3.03□□□□□ -1.92
SHS1YDL225W MRP13P12686 339 aa3.02□□□□□ -1.93
SHS1YDL225W MRP7P12687 371 aa3.02□□□□□ -1.93
SHS1YDL225W BUD5P25300 642 aaPredicted RBP3.02□□□□□ -1.93
SHS1YDL225W TIF3P34167 436 aaKnown RBP3.02□□□□□ -1.93
SHS1YDL225W MTR2P34232 184 aaKnown RBP3.02□□□□□ -1.93
SHS1YDL225W REG2P38232 338 aa3.02□□□□□ -1.93
SHS1YDL225W YIL152WP40455 235 aa3.02□□□□□ -1.93
SHS1YDL225W MAF1P41910 395 aa3.02□□□□□ -1.93
SHS1YDL225W APT1P49435 187 aaKnown RBP3.02□□□□□ -1.93
SHS1YDL225W VID30P53076 958 aa3.02□□□□□ -1.93
SHS1YDL225W HOS2P53096 452 aaPredicted RBP3.02□□□□□ -1.93
SHS1YDL225W IPI3P53877 555 aa3.02□□□□□ -1.93
SHS1YDL225W TIM10P87108 93 aa3.02□□□□□ -1.93
SHS1YDL225W SMA1Q02651 245 aa3.02□□□□□ -1.93
SHS1YDL225W RPC11Q04307 110 aaPredicted RBP3.02□□□□□ -1.93
SHS1YDL225W YMR254CQ04838 102 aa3.02□□□□□ -1.93
SHS1YDL225W MFB1Q04922 465 aa3.02□□□□□ -1.93
SHS1YDL225W TSR2Q06672 205 aaKnown RBP3.02□□□□□ -1.93
SHS1YDL225W SRL1Q08673 210 aa3.02□□□□□ -1.93
SHS1YDL225W DSE3Q08729 430 aa3.02□□□□□ -1.93
SHS1YDL225W RDR1Q08904 546 aa3.02□□□□□ -1.93
SHS1YDL225W TAH18Q12181 623 aa3.02□□□□□ -1.93
SHS1YDL225W YJR112W-AQ3E743 109 aa3.02□□□□□ -1.93
SHS1YDL225W ART10P18634 518 aaKnown RBP3.01□□□□□ -1.93
SHS1YDL225W RPL32P38061 130 aaKnown RBP3.01□□□□□ -1.93
SHS1YDL225W ALG5P40350 334 aa3.01□□□□□ -1.93
SHS1YDL225W ESL1P40456 1118 aa3.01□□□□□ -1.93
SHS1YDL225W IAH1P41734 238 aa3.01□□□□□ -1.93
SHS1YDL225W RMD8P43620 662 aa3.01□□□□□ -1.93
SHS1YDL225W YGR066CP53242 292 aa3.01□□□□□ -1.93
SHS1YDL225W SOL4P53315 255 aa3.01□□□□□ -1.93
SHS1YDL225W RPT6Q01939 405 aaKnown RBP3.01□□□□□ -1.93
SHS1YDL225W DIG1Q03063 452 aaKnown RBP3.01□□□□□ -1.93
SHS1YDL225W MSC1Q03104 513 aa3.01□□□□□ -1.93
SHS1YDL225W VPS38Q05919 439 aa3.01□□□□□ -1.93
SHS1YDL225W SGS1P35187 1447 aa3.01□□□□□ -1.93
SHS1YDL225W INH1P01097 85 aa3.01□□□□□ -1.93
SHS1YDL225W PDA1P16387 420 aaKnown RBP3.01□□□□□ -1.93
SHS1YDL225W YCR043CP25361 127 aa3.01□□□□□ -1.93
SHS1YDL225W GID7P25569 745 aa3.01□□□□□ -1.93
SHS1YDL225W MGR1P25573 417 aa3.01□□□□□ -1.93
SHS1YDL225W SEF1P34228 1148 aa3.01□□□□□ -1.93
SHS1YDL225W TCD2P36101 447 aaKnown RBP3.01□□□□□ -1.93
SHS1YDL225W SRO77P38163 1010 aa3.01□□□□□ -1.93
SHS1YDL225W ARC40P38328 384 aaKnown RBP3.01□□□□□ -1.93
SHS1YDL225W RTS2P40962 232 aa3.01□□□□□ -1.93
SHS1YDL225W IMD4P50094 524 aaKnown RBP3.01□□□□□ -1.93
SHS1YDL225W BET4Q00618 327 aa3.01□□□□□ -1.93
SHS1YDL225W MDM1Q01846 1127 aa3.01□□□□□ -1.93
SHS1YDL225W APL5Q08951 932 aaKnown RBP3.01□□□□□ -1.93
SHS1YDL225W GAL80P04387 435 aa3□□□□□ -1.93
SHS1YDL225W ERG7P38604 731 aa3□□□□□ -1.93
SHS1YDL225W MET30P39014 640 aa3□□□□□ -1.93
SHS1YDL225W YEL057CP39983 233 aa3□□□□□ -1.93
SHS1YDL225W YIL169CP40442 995 aa3□□□□□ -1.93
SHS1YDL225W SPO22P40511 975 aa3□□□□□ -1.93
SHS1YDL225W DOT5P40553 215 aa3□□□□□ -1.93
SHS1YDL225W TES1P41903 349 aaKnown RBP3□□□□□ -1.93
SHS1YDL225W SSK1Q07084 712 aa3□□□□□ -1.93
SHS1YDL225W CDC45Q08032 650 aa3□□□□□ -1.93
SHS1YDL225W AVL9Q12500 764 aa3□□□□□ -1.93
SHS1YDL225W FOB1O13329 566 aa2.99□□□□□ -1.93
SHS1YDL225W ARG3P05150 338 aa2.99□□□□□ -1.93
SHS1YDL225W DFR1P07807 211 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
SHS1YDL225W OCA4P25366 362 aa2.99□□□□□ -1.93
SHS1YDL225W SNC1P31109 117 aa2.99□□□□□ -1.93
SHS1YDL225W MET28P40573 187 aa2.99□□□□□ -1.93
SHS1YDL225W ARF3P40994 183 aaRIP-Chip data2.99□□□□□ -1.93not detected
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms