RNA–Protein interactions for RNA: YDL115C

IWR1, Transcript of RNA polymerase II transport factor, conserved from yeast to humans, yeast

Gene IWR1, Length 1,062 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IWR1	YDL115C	TOA1	P32773	286 aa		5.1	□□□□□ -1.59
IWR1	YDL115C	PEX2	P32800	271 aa		5.1	□□□□□ -1.59
IWR1	YDL115C	SGE1	P33335	543 aa		5.1	□□□□□ -1.59
IWR1	YDL115C	YKR051W	P36142	418 aa		5.1	□□□□□ -1.59
IWR1	YDL115C	YBR056W	P38081	501 aa		5.1	□□□□□ -1.59
IWR1	YDL115C	KAP104	P38217	918 aa	Known RBP	5.1	□□□□□ -1.59
IWR1	YDL115C	URA8	P38627	578 aa	Predicted RBP	5.1	□□□□□ -1.59
IWR1	YDL115C	PPE1	P38796	400 aa		5.1	□□□□□ -1.59
IWR1	YDL115C	CHS7	P38843	316 aa		5.1	□□□□□ -1.59
IWR1	YDL115C	MNN1	P39106	762 aa		5.1	□□□□□ -1.59
IWR1	YDL115C	NUP60	P39705	539 aa		5.1	□□□□□ -1.59
IWR1	YDL115C	EDC3	P39998	551 aa	Known RBP	5.1	□□□□□ -1.59
IWR1	YDL115C	YAT2	P40017	923 aa		5.1	□□□□□ -1.59
IWR1	YDL115C	SDP1	P40479	209 aa		5.1	□□□□□ -1.59
IWR1	YDL115C	TAH11	P47112	604 aa		5.1	□□□□□ -1.59
IWR1	YDL115C	PRP24	P49960	444 aa	Known RBP	5.1	□□□□□ -1.59
IWR1	YDL115C	PSP1	P50896	841 aa	Known RBP	5.1	□□□□□ -1.59
IWR1	YDL115C	SLI1	P53304	468 aa		5.1	□□□□□ -1.59
IWR1	YDL115C	INP2	Q03824	705 aa		5.1	□□□□□ -1.59
IWR1	YDL115C	ARA2	Q04212	335 aa		5.1	□□□□□ -1.59
IWR1	YDL115C	TAF11	Q04226	346 aa		5.1	□□□□□ -1.59
IWR1	YDL115C	YET3	Q07451	203 aa		5.1	□□□□□ -1.59
IWR1	YDL115C	LDB18	Q07887	179 aa		5.1	□□□□□ -1.59
IWR1	YDL115C	ENV7	Q12003	364 aa		5.1	□□□□□ -1.59
IWR1	YDL115C	TOP3	P13099	656 aa		5.09	□□□□□ -1.59
IWR1	YDL115C	MTF1	P14908	341 aa	Known RBP	5.09	□□□□□ -1.59
IWR1	YDL115C	TSR4	P25040	408 aa		5.09	□□□□□ -1.59
IWR1	YDL115C	COY1	P34237	679 aa		5.09	□□□□□ -1.59
IWR1	YDL115C	BET3	P36149	193 aa		5.09	□□□□□ -1.59
IWR1	YDL115C	MRPL40	P36534	297 aa		5.09	□□□□□ -1.59
IWR1	YDL115C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.59	not detected
IWR1	YDL115C	SFB3	P38810	929 aa		5.09	□□□□□ -1.59
IWR1	YDL115C	CTF8	P38877	133 aa		5.09	□□□□□ -1.59
IWR1	YDL115C	SEC28	P40509	296 aa	Known RBP	5.09	□□□□□ -1.59
IWR1	YDL115C	TDA10	P42938	290 aa		5.09	□□□□□ -1.59
IWR1	YDL115C	UBP6	P43593	499 aa	Known RBP	5.09	□□□□□ -1.59
IWR1	YDL115C	FAR3	P46671	204 aa		5.09	□□□□□ -1.59
IWR1	YDL115C	ARC1	P46672	376 aa	Known RBP	5.09	□□□□□ -1.59
IWR1	YDL115C	DLD2	P46681	530 aa	Known RBP	5.09	□□□□□ -1.59
IWR1	YDL115C	TAN1	P53072	289 aa	Predicted RBP	5.09	□□□□□ -1.59
IWR1	YDL115C	RCF2	P53721	224 aa		5.09	□□□□□ -1.59
IWR1	YDL115C	NOP15	P53927	220 aa	Predicted RBP	5.09	□□□□□ -1.59
IWR1	YDL115C	YNL058C	P53947	316 aa		5.09	□□□□□ -1.59
IWR1	YDL115C	SLT2	Q00772	484 aa		5.09	□□□□□ -1.59
IWR1	YDL115C	YMR160W	Q03823	816 aa		5.09	□□□□□ -1.59
IWR1	YDL115C	EMI2	Q04409	500 aa	Known RBP	5.09	□□□□□ -1.59
IWR1	YDL115C	YDR109C	Q04585	715 aa		5.09	□□□□□ -1.59
IWR1	YDL115C	YSH1	Q06224	779 aa	Predicted RBP	5.09	□□□□□ -1.59
IWR1	YDL115C	YLR012C	Q07927	99 aa		5.09	□□□□□ -1.59
IWR1	YDL115C	NDJ1	Q12366	352 aa		5.09	□□□□□ -1.59
IWR1	YDL115C	SPE4	Q12455	300 aa		5.09	□□□□□ -1.59
IWR1	YDL115C	AFI1	Q99222	893 aa		5.09	□□□□□ -1.59
IWR1	YDL115C	RPS9A	O13516	197 aa	Known RBP	5.08	□□□□□ -1.6
IWR1	YDL115C	TEF1	P02994	458 aa	Known RBP	5.08	□□□□□ -1.6
IWR1	YDL115C	HMG2	P12684	1045 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	GID7	P25569	745 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	SYN8	P31377	255 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	NIP1	P32497	812 aa	Known RBP	5.08	□□□□□ -1.6
IWR1	YDL115C	SMI1	P32566	505 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	GCS1	P35197	352 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	RFS1	P38234	210 aa	Known RBP	5.08	□□□□□ -1.6
IWR1	YDL115C	ATG12	P38316	186 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	RIM4	P38741	713 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	MRX1	P40050	688 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	ATM1	P40416	690 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	BUL1	P48524	976 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	NIT3	P49954	291 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	HSV2	P50079	448 aa	Predicted RBP	5.08	□□□□□ -1.6
IWR1	YDL115C	TEL2	P53038	688 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	BIO4	P53630	237 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	IST1	P53843	298 aa	Predicted RBP	5.08	□□□□□ -1.6
IWR1	YDL115C	GTR1	Q00582	310 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	TOF2	Q02208	771 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	HER2	Q03557	464 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	HPT1	Q04178	221 aa	Known RBP	5.08	□□□□□ -1.6
IWR1	YDL115C	SPC24	Q04477	213 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	CDC123	Q05791	360 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	YLR177W	Q06251	628 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	SWC7	Q06707	132 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	CMS1	Q07897	291 aa	Known RBP	5.08	□□□□□ -1.6
IWR1	YDL115C	YGR161W-C	Q3E744	92 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	RGS2	Q99188	309 aa		5.08	□□□□□ -1.6
IWR1	YDL115C	TRP4	P07285	380 aa	Predicted RBP	5.07	□□□□□ -1.6
IWR1	YDL115C	PRP16	P15938	1071 aa	Predicted RBP	5.07	□□□□□ -1.6
IWR1	YDL115C	ATP12	P22135	325 aa		5.07	□□□□□ -1.6
IWR1	YDL115C	MIH1	P23748	554 aa		5.07	□□□□□ -1.6
IWR1	YDL115C	RAD16	P31244	790 aa		5.07	□□□□□ -1.6
IWR1	YDL115C	PHA2	P32452	334 aa		5.07	□□□□□ -1.6
IWR1	YDL115C	SSE1	P32589	693 aa	Known RBP	5.07	□□□□□ -1.6
IWR1	YDL115C	MRP21	P38175	177 aa		5.07	□□□□□ -1.6
IWR1	YDL115C	HSM3	P38348	480 aa		5.07	□□□□□ -1.6
IWR1	YDL115C	FMP10	P40098	244 aa		5.07	□□□□□ -1.6
IWR1	YDL115C	PEP8	P40335	379 aa		5.07	□□□□□ -1.6
IWR1	YDL115C	UBP7	P40453	1071 aa		5.07	□□□□□ -1.6
IWR1	YDL115C	FAF1	P40546	346 aa	Predicted RBP	5.07	□□□□□ -1.6
IWR1	YDL115C	IST3	P40565	148 aa	Predicted RBP	5.07	□□□□□ -1.6
IWR1	YDL115C	YIR016W	P40572	265 aa		5.07	□□□□□ -1.6
IWR1	YDL115C	YTP1	P53584	459 aa		5.07	□□□□□ -1.6
IWR1	YDL115C	YNL144C	P53907	740 aa		5.07	□□□□□ -1.6
IWR1	YDL115C	UBX4	P54730	416 aa		5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 70.7 ms