RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W UBX3Q12229 455 aa3.77□□□□□ -1.81
UBC9YDL064W ARG3P05150 338 aa3.76□□□□□ -1.81
UBC9YDL064W GAC1P28006 793 aa3.76□□□□□ -1.81
UBC9YDL064W SSE2P32590 693 aaKnown RBP3.76□□□□□ -1.81
UBC9YDL064W PDR3P33200 976 aa3.76□□□□□ -1.81
UBC9YDL064W YBR144CP34215 104 aa3.76□□□□□ -1.81
UBC9YDL064W YIL152WP40455 235 aa3.76□□□□□ -1.81
UBC9YDL064W PTR3P43606 678 aa3.76□□□□□ -1.81
UBC9YDL064W YNL234WP53857 426 aa3.76□□□□□ -1.81
UBC9YDL064W IPI3P53877 555 aa3.76□□□□□ -1.81
UBC9YDL064W NUP100Q02629 959 aa3.76□□□□□ -1.81
UBC9YDL064W TDA9Q04545 1251 aa3.76□□□□□ -1.81
UBC9YDL064W RCN2Q12044 265 aa3.76□□□□□ -1.81
UBC9YDL064W YJR112W-AQ3E743 109 aa3.76□□□□□ -1.81
UBC9YDL064W SGS1P35187 1447 aa3.76□□□□□ -1.81
UBC9YDL064W GCN4P03069 281 aa3.75□□□□□ -1.81
UBC9YDL064W PUT2P07275 575 aa3.75□□□□□ -1.81
UBC9YDL064W SGV1P23293 657 aaKnown RBP3.75□□□□□ -1.81
UBC9YDL064W YBL055CP34220 418 aaPredicted RBP3.75□□□□□ -1.81
UBC9YDL064W NUP133P36161 1157 aa3.75□□□□□ -1.81
UBC9YDL064W REG2P38232 338 aa3.75□□□□□ -1.81
UBC9YDL064W SPC97P38863 823 aa3.75□□□□□ -1.81
UBC9YDL064W YEL057CP39983 233 aa3.75□□□□□ -1.81
UBC9YDL064W SPO22P40511 975 aa3.75□□□□□ -1.81
UBC9YDL064W APT1P49435 187 aaKnown RBP3.75□□□□□ -1.81
UBC9YDL064W MDM1Q01846 1127 aa3.75□□□□□ -1.81
UBC9YDL064W SMA1Q02651 245 aa3.75□□□□□ -1.81
UBC9YDL064W DIG1Q03063 452 aaKnown RBP3.75□□□□□ -1.81
UBC9YDL064W ECI1Q05871 280 aa3.75□□□□□ -1.81
UBC9YDL064W SNA4Q07549 140 aa3.75□□□□□ -1.81
UBC9YDL064W RDR1Q08904 546 aa3.75□□□□□ -1.81
UBC9YDL064W BSC1Q12140 328 aa3.75□□□□□ -1.81
UBC9YDL064W ARG81P05085 880 aa3.74□□□□□ -1.81
UBC9YDL064W ELO2P25358 347 aa3.74□□□□□ -1.81
UBC9YDL064W YCR043CP25361 127 aa3.74□□□□□ -1.81
UBC9YDL064W TMT1P32643 299 aa3.74□□□□□ -1.81
UBC9YDL064W RPL32P38061 130 aaKnown RBP3.74□□□□□ -1.81
UBC9YDL064W ROT2P38138 954 aa3.74□□□□□ -1.81
UBC9YDL064W ICS2P38284 255 aa3.74□□□□□ -1.81
UBC9YDL064W PHO90P39535 881 aa3.74□□□□□ -1.81
UBC9YDL064W PCL6P40038 420 aa3.74□□□□□ -1.81
UBC9YDL064W DOT5P40553 215 aa3.74□□□□□ -1.81
UBC9YDL064W FAR3P46671 204 aa3.74□□□□□ -1.81
UBC9YDL064W IMD4P50094 524 aaKnown RBP3.74□□□□□ -1.81
UBC9YDL064W PYK2P52489 506 aaKnown RBP3.74□□□□□ -1.81
UBC9YDL064W SOL4P53315 255 aa3.74□□□□□ -1.81
UBC9YDL064W BOP3P53958 396 aa3.74□□□□□ -1.81
UBC9YDL064W RPT6Q01939 405 aaKnown RBP3.74□□□□□ -1.81
UBC9YDL064W MLH2Q07980 695 aa3.74□□□□□ -1.81
UBC9YDL064W FMP40Q08968 688 aaPredicted RBP3.74□□□□□ -1.81
UBC9YDL064W ICT1Q12385 394 aa3.74□□□□□ -1.81
UBC9YDL064W INH1P01097 85 aa3.73□□□□□ -1.81
UBC9YDL064W GAL80P04387 435 aa3.73□□□□□ -1.81
UBC9YDL064W MET17P06106 444 aa3.73□□□□□ -1.81
UBC9YDL064W ART10P18634 518 aaKnown RBP3.73□□□□□ -1.81
UBC9YDL064W BUD5P25300 642 aaPredicted RBP3.73□□□□□ -1.81
UBC9YDL064W BOS1P25385 244 aa3.73□□□□□ -1.81
UBC9YDL064W RPS2P25443 254 aaKnown RBP3.73□□□□□ -1.81
UBC9YDL064W MGR1P25573 417 aa3.73□□□□□ -1.81
UBC9YDL064W ATO2P32907 282 aa3.73□□□□□ -1.81
UBC9YDL064W TCD2P36101 447 aaKnown RBP3.73□□□□□ -1.81
UBC9YDL064W YPK3P38070 525 aa3.73□□□□□ -1.81
UBC9YDL064W ARC40P38328 384 aaKnown RBP3.73□□□□□ -1.81
UBC9YDL064W FET5P43561 622 aa3.73□□□□□ -1.81
UBC9YDL064W RMD8P43620 662 aa3.73□□□□□ -1.81
UBC9YDL064W BET4Q00618 327 aa3.73□□□□□ -1.81
UBC9YDL064W CTL1Q03220 320 aaKnown RBP3.73□□□□□ -1.81
UBC9YDL064W COQ9Q05779 260 aa3.73□□□□□ -1.81
UBC9YDL064W VPS38Q05919 439 aa3.73□□□□□ -1.81
UBC9YDL064W APL5Q08951 932 aaKnown RBP3.73□□□□□ -1.81
UBC9YDL064W TAH18Q12181 623 aa3.73□□□□□ -1.81
UBC9YDL064W NCE102Q12207 173 aaRIP-Chip data3.73□□□□□ -1.81not detected
UBC9YDL064W RLM1Q12224 676 aa3.73□□□□□ -1.81
UBC9YDL064W MRP7P12687 371 aa3.72□□□□□ -1.81
UBC9YDL064W SEF1P34228 1148 aa3.72□□□□□ -1.81
UBC9YDL064W RTS2P40962 232 aa3.72□□□□□ -1.81
UBC9YDL064W TES1P41903 349 aaKnown RBP3.72□□□□□ -1.81
UBC9YDL064W YGR127WP53275 312 aa3.72□□□□□ -1.81
UBC9YDL064W SMM1P53720 384 aaKnown RBP3.72□□□□□ -1.81
UBC9YDL064W YNL181WP53878 407 aa3.72□□□□□ -1.81
UBC9YDL064W MPS1P54199 764 aa3.72□□□□□ -1.81
UBC9YDL064W YPL068CQ02749 293 aa3.72□□□□□ -1.81
UBC9YDL064W TSR2Q06672 205 aaKnown RBP3.72□□□□□ -1.81
UBC9YDL064W YAP7Q08182 245 aa3.72□□□□□ -1.81
UBC9YDL064W DSE3Q08729 430 aa3.72□□□□□ -1.81
UBC9YDL064W GID7P25569 745 aa3.71□□□□□ -1.82
UBC9YDL064W YKL100CP34248 587 aa3.71□□□□□ -1.82
UBC9YDL064W MET30P39014 640 aa3.71□□□□□ -1.82
UBC9YDL064W ALG5P40350 334 aa3.71□□□□□ -1.82
UBC9YDL064W MET28P40573 187 aa3.71□□□□□ -1.82
UBC9YDL064W IRC6P43615 237 aa3.71□□□□□ -1.82
UBC9YDL064W VID30P53076 958 aa3.71□□□□□ -1.82
UBC9YDL064W DRN1P53255 507 aaKnown RBP3.71□□□□□ -1.82
UBC9YDL064W BUD32P53323 261 aa3.71□□□□□ -1.82
UBC9YDL064W DUG3P53871 357 aa3.71□□□□□ -1.82
UBC9YDL064W MRPL19P53875 158 aa3.71□□□□□ -1.82
UBC9YDL064W YMR254CQ04838 102 aa3.71□□□□□ -1.82
UBC9YDL064W DIC1Q06143 298 aa3.71□□□□□ -1.82
UBC9YDL064W YDL057WQ07379 328 aa3.71□□□□□ -1.82
UBC9YDL064W RTP1Q12751 981 aa3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms