RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W DPB4Q04603 196 aaKnown RBP3.82□□□□□ -1.8
TSR1YDL060W HEL2Q05580 639 aaKnown RBP3.82□□□□□ -1.8
TSR1YDL060W STP3Q05937 343 aa3.82□□□□□ -1.8
TSR1YDL060W FMP45Q07651 309 aa3.82□□□□□ -1.8
TSR1YDL060W SLK19Q08581 821 aaKnown RBP3.82□□□□□ -1.8
TSR1YDL060W GPM3Q12326 303 aa3.82□□□□□ -1.8
TSR1YDL060W CET1O13297 549 aaPredicted RBP3.81□□□□□ -1.8
TSR1YDL060W MDH1P17505 334 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
TSR1YDL060W RDS1P25611 832 aa3.81□□□□□ -1.8
TSR1YDL060W URA7P28274 579 aaKnown RBP3.81□□□□□ -1.8
TSR1YDL060W SIF2P38262 535 aa3.81□□□□□ -1.8
TSR1YDL060W CRG1P38892 291 aaRIP-Chip data3.81□□□□□ -1.8not detected
TSR1YDL060W JHD1P40034 492 aa3.81□□□□□ -1.8
TSR1YDL060W RTT105P40063 208 aa3.81□□□□□ -1.8
TSR1YDL060W PFK26P40433 827 aaKnown RBP3.81□□□□□ -1.8
TSR1YDL060W HYR1P40581 163 aaKnown RBP3.81□□□□□ -1.8
TSR1YDL060W MIC19P43594 170 aa3.81□□□□□ -1.8
TSR1YDL060W YJR079WP47126 109 aa3.81□□□□□ -1.8
TSR1YDL060W LCL3P53153 274 aa3.81□□□□□ -1.8
TSR1YDL060W RBA50Q04418 439 aa3.81□□□□□ -1.8
TSR1YDL060W RIX7Q07844 837 aaKnown RBP3.81□□□□□ -1.8
TSR1YDL060W YOR389WQ08912 624 aa3.81□□□□□ -1.8
TSR1YDL060W RIM20Q12033 661 aa3.81□□□□□ -1.8
TSR1YDL060W USV1Q12132 391 aa3.81□□□□□ -1.8
TSR1YDL060W SKS1Q12505 502 aa3.81□□□□□ -1.8
TSR1YDL060W VCX1Q99385 411 aa3.81□□□□□ -1.8
TSR1YDL060W CUE2P36075 443 aaKnown RBP3.81□□□□□ -1.8
TSR1YDL060W KTR3P38130 404 aaPredicted RBP3.81□□□□□ -1.8
TSR1YDL060W REG2P38232 338 aa3.81□□□□□ -1.8
TSR1YDL060W EHT1P38295 451 aa3.81□□□□□ -1.8
TSR1YDL060W HRB1P38922 454 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
TSR1YDL060W FTR1P40088 404 aa3.81□□□□□ -1.8
TSR1YDL060W DOT5P40553 215 aa3.81□□□□□ -1.8
TSR1YDL060W NAS2P40555 220 aa3.81□□□□□ -1.8
TSR1YDL060W MET28P40573 187 aa3.81□□□□□ -1.8
TSR1YDL060W ROK1P45818 564 aaPredicted RBP3.81□□□□□ -1.8
TSR1YDL060W CUL3P53202 744 aa3.81□□□□□ -1.8
TSR1YDL060W CAF130P53280 1122 aaPredicted RBP3.81□□□□□ -1.8
TSR1YDL060W TOF1P53840 1238 aa3.81□□□□□ -1.8
TSR1YDL060W YNL247WP53852 767 aaKnown RBP3.81□□□□□ -1.8
TSR1YDL060W INN1P53901 409 aa3.81□□□□□ -1.8
TSR1YDL060W EOS1P53938 366 aa3.81□□□□□ -1.8
TSR1YDL060W APM1Q00776 475 aaPredicted RBP3.81□□□□□ -1.8
TSR1YDL060W HMO1Q03973 246 aaKnown RBP3.81□□□□□ -1.8
TSR1YDL060W CSI1Q04368 295 aa3.81□□□□□ -1.8
TSR1YDL060W GTB1Q04924 702 aa3.81□□□□□ -1.8
TSR1YDL060W SPE3Q12074 293 aaKnown RBP3.81□□□□□ -1.8
TSR1YDL060W URB1P34241 1764 aaKnown RBP3.81□□□□□ -1.8
TSR1YDL060W SEC7P11075 2009 aaKnown RBP3.81□□□□□ -1.8
TSR1YDL060W PRP28P23394 588 aa3.8□□□□□ -1.8
TSR1YDL060W YCR051WP25631 222 aa3.8□□□□□ -1.8
TSR1YDL060W PRE2P30656 287 aaKnown RBP3.8□□□□□ -1.8
TSR1YDL060W RIB7P33312 244 aa3.8□□□□□ -1.8
TSR1YDL060W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
TSR1YDL060W YPT53P36019 220 aa3.8□□□□□ -1.8
TSR1YDL060W UBP11P36026 717 aa3.8□□□□□ -1.8
TSR1YDL060W ATF1P40353 525 aa3.8□□□□□ -1.8
TSR1YDL060W ORM1P53224 222 aa3.8□□□□□ -1.8
TSR1YDL060W FHN1P53279 174 aa3.8□□□□□ -1.8
TSR1YDL060W LGE1Q02796 332 aaKnown RBP3.8□□□□□ -1.8
TSR1YDL060W GGA1Q06336 557 aa3.8□□□□□ -1.8
TSR1YDL060W YDL073WQ07454 984 aa3.8□□□□□ -1.8
TSR1YDL060W MLH3Q12083 715 aa3.8□□□□□ -1.8
TSR1YDL060W LYS21Q12122 440 aaKnown RBP3.8□□□□□ -1.8
TSR1YDL060W UTP10P42945 1769 aaKnown RBP3.8□□□□□ -1.8
TSR1YDL060W RPS9BP05755 195 aaKnown RBP3.8□□□□□ -1.8
TSR1YDL060W ERV1P27882 189 aa3.8□□□□□ -1.8
TSR1YDL060W PAP1P29468 568 aaKnown RBP3.8□□□□□ -1.8
TSR1YDL060W GYP6P32806 458 aa3.8□□□□□ -1.8
TSR1YDL060W PRX1P34227 261 aaKnown RBP3.8□□□□□ -1.8
TSR1YDL060W MRX1P40050 688 aa3.8□□□□□ -1.8
TSR1YDL060W YNR068CP53754 272 aa3.8□□□□□ -1.8
TSR1YDL060W ARX1Q03862 593 aaKnown RBP3.8□□□□□ -1.8
TSR1YDL060W OSW1Q08692 278 aa3.8□□□□□ -1.8
TSR1YDL060W NUS1Q12063 375 aa3.8□□□□□ -1.8
TSR1YDL060W ATG9Q12142 997 aa3.8□□□□□ -1.8
TSR1YDL060W SPE4Q12455 300 aa3.8□□□□□ -1.8
TSR1YDL060W RPN13O13563 156 aa3.79□□□□□ -1.8
TSR1YDL060W CTT1P06115 562 aa3.79□□□□□ -1.8
TSR1YDL060W RAD1P06777 1100 aa3.79□□□□□ -1.8
TSR1YDL060W RNR2P09938 399 aaKnown RBP3.79□□□□□ -1.8
TSR1YDL060W ILV6P25605 309 aaKnown RBP3.79□□□□□ -1.8
TSR1YDL060W BCS1P32839 456 aa3.79□□□□□ -1.8
TSR1YDL060W PPQ1P32945 549 aa3.79□□□□□ -1.8
TSR1YDL060W ERC1P38767 581 aa3.79□□□□□ -1.8
TSR1YDL060W YHR097CP38809 366 aaKnown RBP3.79□□□□□ -1.8
TSR1YDL060W ARB1P40024 610 aaKnown RBP3.79□□□□□ -1.8
TSR1YDL060W FET5P43561 622 aa3.79□□□□□ -1.8
TSR1YDL060W ROY1Q04847 553 aa3.79□□□□□ -1.8
TSR1YDL060W YLR456WQ06199 204 aa3.79□□□□□ -1.8
TSR1YDL060W MMR1Q06324 491 aa3.79□□□□□ -1.8
TSR1YDL060W TAF3Q12297 353 aa3.79□□□□□ -1.8
TSR1YDL060W POM34Q12445 299 aa3.79□□□□□ -1.8
TSR1YDL060W AFI1Q99222 893 aa3.79□□□□□ -1.8
TSR1YDL060W TY1B-NL2Q99337 1749 aaKnown RBP3.79□□□□□ -1.8
TSR1YDL060W TUB1P09733 447 aaKnown RBP3.78□□□□□ -1.8
TSR1YDL060W TUP1P16649 713 aa3.78□□□□□ -1.8
TSR1YDL060W KIN82P25341 720 aa3.78□□□□□ -1.8
TSR1YDL060W PRP45P28004 379 aaPredicted RBP3.78□□□□□ -1.8
TSR1YDL060W NTH1P32356 751 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms