RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPK3	YBR028C	POS5	Q06892	414 aa		4.77	□□□□□ -1.65
YPK3	YBR028C	ATX2	Q12067	313 aa		4.77	□□□□□ -1.65
YPK3	YBR028C	PGA3	Q12746	312 aa	Known RBP	4.77	□□□□□ -1.65
YPK3	YBR028C	EDE1	P34216	1381 aa		4.77	□□□□□ -1.65
YPK3	YBR028C	PUT2	P07275	575 aa		4.76	□□□□□ -1.65
YPK3	YBR028C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
YPK3	YBR028C	ROX1	P25042	368 aa		4.76	□□□□□ -1.65
YPK3	YBR028C	UBA4	P38820	440 aa		4.76	□□□□□ -1.65
YPK3	YBR028C	YMR124W	P39523	943 aa	Known RBP	4.76	□□□□□ -1.65
YPK3	YBR028C	DOT5	P40553	215 aa		4.76	□□□□□ -1.65
YPK3	YBR028C	PYK2	P52489	506 aa	Known RBP	4.76	□□□□□ -1.65
YPK3	YBR028C	YGR127W	P53275	312 aa		4.76	□□□□□ -1.65
YPK3	YBR028C	IPI3	P53877	555 aa		4.76	□□□□□ -1.65
YPK3	YBR028C	RSM23	Q01163	450 aa		4.76	□□□□□ -1.65
YPK3	YBR028C	VPS38	Q05919	439 aa		4.76	□□□□□ -1.65
YPK3	YBR028C	MCP2	Q06567	569 aa		4.76	□□□□□ -1.65
YPK3	YBR028C	ECM30	Q06673	1274 aa		4.76	□□□□□ -1.65
YPK3	YBR028C	GSH2	Q08220	491 aa		4.76	□□□□□ -1.65
YPK3	YBR028C	RLM1	Q12224	676 aa		4.76	□□□□□ -1.65
YPK3	YBR028C	HER1	Q12276	1246 aa		4.76	□□□□□ -1.65
YPK3	YBR028C	BUD5	P25300	642 aa	Predicted RBP	4.75	□□□□□ -1.65
YPK3	YBR028C	SEF1	P34228	1148 aa		4.75	□□□□□ -1.65
YPK3	YBR028C	YKL100C	P34248	587 aa		4.75	□□□□□ -1.65
YPK3	YBR028C	PTR3	P43606	678 aa		4.75	□□□□□ -1.65
YPK3	YBR028C	IZH1	Q03419	316 aa		4.75	□□□□□ -1.65
YPK3	YBR028C	YDL218W	Q07629	317 aa		4.75	□□□□□ -1.65
YPK3	YBR028C	ETT1	Q08421	412 aa	Known RBP	4.75	□□□□□ -1.65
YPK3	YBR028C	HSH49	Q99181	213 aa	Predicted RBP	4.75	□□□□□ -1.65
YPK3	YBR028C	GAL80	P04387	435 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	ARG81	P05085	880 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	RPL42A	P0CX27	106 aa	Known RBP	4.74	□□□□□ -1.65
YPK3	YBR028C	RPL42B	P0CX28	106 aa	Known RBP	4.74	□□□□□ -1.65
YPK3	YBR028C	SNF3	P10870	884 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	ART10	P18634	518 aa	Known RBP	4.74	□□□□□ -1.65
YPK3	YBR028C	BOS1	P25385	244 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	WBP1	P33767	430 aa	Known RBP	4.74	□□□□□ -1.65
YPK3	YBR028C	MTR2	P34232	184 aa	Known RBP	4.74	□□□□□ -1.65
YPK3	YBR028C	STV1	P37296	890 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	SCO2	P38072	301 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	GND1	P38720	489 aa	Known RBP	4.74	□□□□□ -1.65
YPK3	YBR028C	ALG5	P40350	334 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	MET18	P40469	1032 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	YML122C	Q03207	126 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	AVL9	Q12500	764 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	YPR089W	O13585	888 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	PDA1	P16387	420 aa	Known RBP	4.74	□□□□□ -1.65
YPK3	YBR028C	RPB8	P20436	146 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	ELO2	P25358	347 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	ERG3	P32353	365 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	YPT53	P36019	220 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	ICS2	P38284	255 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	UTP9	P38882	575 aa	Known RBP	4.74	□□□□□ -1.65
YPK3	YBR028C	PHO90	P39535	881 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	VRG4	P40107	337 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	ROK1	P45818	564 aa	Predicted RBP	4.74	□□□□□ -1.65
YPK3	YBR028C	PET130	P47065	347 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	JJJ1	P53863	590 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	YLR287C	Q05881	355 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	SCM3	Q12334	223 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	GRX6	Q12438	231 aa		4.74	□□□□□ -1.65
YPK3	YBR028C	FOB1	O13329	566 aa		4.73	□□□□□ -1.65
YPK3	YBR028C	CBP1	P07252	654 aa		4.73	□□□□□ -1.65
YPK3	YBR028C	RED1	P14291	827 aa		4.73	□□□□□ -1.65
YPK3	YBR028C	RPL32	P38061	130 aa	Known RBP	4.73	□□□□□ -1.65
YPK3	YBR028C	CTL1	Q03220	320 aa	Known RBP	4.73	□□□□□ -1.65
YPK3	YBR028C	SYF1	Q04048	859 aa	Predicted RBP	4.73	□□□□□ -1.65
YPK3	YBR028C	COQ9	Q05779	260 aa		4.73	□□□□□ -1.65
YPK3	YBR028C	PRD1	P25375	712 aa		4.72	□□□□□ -1.65
YPK3	YBR028C	GPI10	P30777	616 aa		4.72	□□□□□ -1.65
YPK3	YBR028C	BOP3	P53958	396 aa		4.72	□□□□□ -1.65
YPK3	YBR028C	NUP100	Q02629	959 aa		4.72	□□□□□ -1.65
YPK3	YBR028C	EKI1	Q03764	534 aa		4.72	□□□□□ -1.65
YPK3	YBR028C	MRD1	Q06106	887 aa	Known RBP	4.72	□□□□□ -1.65
YPK3	YBR028C	NCE102	Q12207	173 aa	RIP-Chip data	4.72	□□□□□ -1.65	not detected
YPK3	YBR028C	RTN2	Q12443	393 aa		4.72	□□□□□ -1.65
YPK3	YBR028C	MRE11	P32829	692 aa		4.71	□□□□□ -1.66
YPK3	YBR028C	NPL6	P32832	435 aa		4.71	□□□□□ -1.66
YPK3	YBR028C	PCI8	P40512	444 aa		4.71	□□□□□ -1.66
YPK3	YBR028C	SOL4	P53315	255 aa		4.71	□□□□□ -1.66
YPK3	YBR028C	ESBP6	P53918	673 aa		4.71	□□□□□ -1.66
YPK3	YBR028C	FIN1	Q03898	291 aa		4.71	□□□□□ -1.66
YPK3	YBR028C	GEP3	Q08622	556 aa		4.71	□□□□□ -1.66
YPK3	YBR028C	CST26	P38226	397 aa		4.7	□□□□□ -1.66
YPK3	YBR028C	CIN4	P39110	191 aa		4.7	□□□□□ -1.66
YPK3	YBR028C	YGR250C	P53316	781 aa	Known RBP	4.7	□□□□□ -1.66
YPK3	YBR028C	ECI1	Q05871	280 aa		4.7	□□□□□ -1.66
YPK3	YBR028C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
YPK3	YBR028C	SGV1	P23293	657 aa	Known RBP	4.7	□□□□□ -1.66
YPK3	YBR028C	MGM1	P32266	881 aa		4.7	□□□□□ -1.66
YPK3	YBR028C	ASK1	P35734	292 aa		4.7	□□□□□ -1.66
YPK3	YBR028C	VID24	P38263	362 aa		4.7	□□□□□ -1.66
YPK3	YBR028C	SMF1	P38925	575 aa		4.7	□□□□□ -1.66
YPK3	YBR028C	PCL6	P40038	420 aa		4.7	□□□□□ -1.66
YPK3	YBR028C	VTC2	P43585	828 aa		4.7	□□□□□ -1.66
YPK3	YBR028C	MDV1	P47025	714 aa		4.7	□□□□□ -1.66
YPK3	YBR028C	AIM22	P47051	409 aa		4.7	□□□□□ -1.66
YPK3	YBR028C	DRN1	P53255	507 aa	Known RBP	4.7	□□□□□ -1.66
YPK3	YBR028C	YDR239C	Q03780	787 aa		4.7	□□□□□ -1.66
YPK3	YBR028C	MRPL1	Q04599	285 aa		4.7	□□□□□ -1.66
YPK3	YBR028C	RDR1	Q08904	546 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 72.9 ms