RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W ERG1P32476 496 aaKnown RBP2.8□□□□□ -1.96
CTK3YML112W CNS1P33313 385 aa2.8□□□□□ -1.96
CTK3YML112W YKL050CP35736 922 aa2.8□□□□□ -1.96
CTK3YML112W PHD1P36093 366 aa2.8□□□□□ -1.96
CTK3YML112W SPC34P36131 295 aa2.8□□□□□ -1.96
CTK3YML112W RRP3P38712 501 aaKnown RBP2.8□□□□□ -1.96
CTK3YML112W KRE9P39005 276 aa2.8□□□□□ -1.96
CTK3YML112W RIC1P40395 1056 aa2.8□□□□□ -1.96
CTK3YML112W SEC24P40482 926 aaKnown RBP2.8□□□□□ -1.96
CTK3YML112W SOL4P53315 255 aa2.8□□□□□ -1.96
CTK3YML112W TMA64Q04600 565 aaKnown RBP2.8□□□□□ -1.96
CTK3YML112W INP53Q12271 1107 aa2.8□□□□□ -1.96
CTK3YML112W SNF1P06782 633 aaKnown RBP2.79□□□□□ -1.96
CTK3YML112W SNF3P10870 884 aa2.79□□□□□ -1.96
CTK3YML112W NOP1P15646 327 aaKnown RBP2.79□□□□□ -1.96
CTK3YML112W SPE2P21182 396 aa2.79□□□□□ -1.96
CTK3YML112W PGS1P25578 521 aa2.79□□□□□ -1.96
CTK3YML112W MCM4P30665 933 aaKnown RBP2.79□□□□□ -1.96
CTK3YML112W SNU114P36048 1008 aaKnown RBP2.79□□□□□ -1.96
CTK3YML112W UBA4P38820 440 aa2.79□□□□□ -1.96
CTK3YML112W ANS1P38832 159 aa2.79□□□□□ -1.96
CTK3YML112W UIP3P39547 235 aa2.79□□□□□ -1.96
CTK3YML112W YER130CP39959 443 aa2.79□□□□□ -1.96
CTK3YML112W BUR6P40096 142 aa2.79□□□□□ -1.96
CTK3YML112W YJR061WP40355 935 aa2.79□□□□□ -1.96
CTK3YML112W ROK1P45818 564 aaPredicted RBP2.79□□□□□ -1.96
CTK3YML112W BNA1P47096 177 aa2.79□□□□□ -1.96
CTK3YML112W TDA7P53882 636 aaPredicted RBP2.79□□□□□ -1.96
CTK3YML112W MUB1Q03162 620 aa2.79□□□□□ -1.96
CTK3YML112W YEH2Q07950 538 aa2.79□□□□□ -1.96
CTK3YML112W CYB2P00175 591 aa2.78□□□□□ -1.96
CTK3YML112W MRS3P10566 314 aa2.78□□□□□ -1.96
CTK3YML112W PRP16P15938 1071 aaPredicted RBP2.78□□□□□ -1.96
CTK3YML112W ACH1P32316 526 aa2.78□□□□□ -1.96
CTK3YML112W YOX1P34161 385 aa2.78□□□□□ -1.96
CTK3YML112W YBR139WP38109 508 aa2.78□□□□□ -1.96
CTK3YML112W PPT2Q12036 173 aa2.78□□□□□ -1.96
CTK3YML112W ARP6Q12509 438 aa2.78□□□□□ -1.96
CTK3YML112W SSM4P40318 1319 aa2.77□□□□□ -1.97
CTK3YML112W RPB2P08518 1224 aaKnown RBP2.77□□□□□ -1.97
CTK3YML112W CPR3P25719 182 aa2.77□□□□□ -1.97
CTK3YML112W BUD14P27637 709 aa2.77□□□□□ -1.97
CTK3YML112W SNC1P31109 117 aa2.77□□□□□ -1.97
CTK3YML112W ROT2P38138 954 aa2.77□□□□□ -1.97
CTK3YML112W DIA4P38705 446 aaPredicted RBP2.77□□□□□ -1.97
CTK3YML112W RTS1P38903 757 aa2.77□□□□□ -1.97
CTK3YML112W SLZ1P40167 298 aa2.77□□□□□ -1.97
CTK3YML112W AXL1P40851 1208 aa2.77□□□□□ -1.97
CTK3YML112W SAP185P40856 1058 aa2.77□□□□□ -1.97
CTK3YML112W PIL1P53252 339 aaKnown RBP2.77□□□□□ -1.97
CTK3YML112W INA17Q02888 182 aa2.77□□□□□ -1.97
CTK3YML112W MSS11Q03825 758 aa2.77□□□□□ -1.97
CTK3YML112W EMI2Q04409 500 aaKnown RBP2.77□□□□□ -1.97
CTK3YML112W RCO1Q04779 684 aa2.77□□□□□ -1.97
CTK3YML112W VID22Q05934 901 aa2.77□□□□□ -1.97
CTK3YML112W FMP45Q07651 309 aa2.77□□□□□ -1.97
CTK3YML112W PDH1Q12428 516 aaKnown RBP2.77□□□□□ -1.97
CTK3YML112W NKP1Q12493 238 aa2.77□□□□□ -1.97
CTK3YML112W MRP20P32387 263 aa2.76□□□□□ -1.97
CTK3YML112W ALY1P36117 915 aa2.76□□□□□ -1.97
CTK3YML112W PSY4P38193 441 aa2.76□□□□□ -1.97
CTK3YML112W SDS24P38314 527 aa2.76□□□□□ -1.97
CTK3YML112W MDM31P38880 579 aa2.76□□□□□ -1.97
CTK3YML112W YHR218WP38899 603 aa2.76□□□□□ -1.97
CTK3YML112W IKS1P47042 667 aa2.76□□□□□ -1.97
CTK3YML112W YGL082WP53155 381 aa2.76□□□□□ -1.97
CTK3YML112W ZDS2P54786 942 aa2.76□□□□□ -1.97
CTK3YML112W SKG3Q06315 1026 aa2.76□□□□□ -1.97
CTK3YML112W SSK1Q07084 712 aa2.76□□□□□ -1.97
CTK3YML112W NBP2Q12163 236 aa2.76□□□□□ -1.97
CTK3YML112W ARG81P05085 880 aa2.75□□□□□ -1.97
CTK3YML112W MRS6P32864 603 aaKnown RBP2.75□□□□□ -1.97
CTK3YML112W YNK1P36010 153 aaKnown RBP2.75□□□□□ -1.97
CTK3YML112W KTR3P38130 404 aaPredicted RBP2.75□□□□□ -1.97
CTK3YML112W TSC10P38342 320 aa2.75□□□□□ -1.97
CTK3YML112W ELO1P39540 310 aa2.75□□□□□ -1.97
CTK3YML112W RPS10BP46784 105 aaKnown RBP2.75□□□□□ -1.97
CTK3YML112W SGM1P47166 707 aa2.75□□□□□ -1.97
CTK3YML112W INN1P53901 409 aa2.75□□□□□ -1.97
CTK3YML112W RPM2Q02773 1202 aa2.75□□□□□ -1.97
CTK3YML112W VMS1Q04311 632 aaKnown RBP2.75□□□□□ -1.97
CTK3YML112W RBA50Q04418 439 aa2.75□□□□□ -1.97
CTK3YML112W HCR1Q05775 265 aaKnown RBP2.75□□□□□ -1.97
CTK3YML112W RPS10AQ08745 105 aaPredicted RBP2.75□□□□□ -1.97
CTK3YML112W RPL15AP05748 204 aaKnown RBP2.74□□□□□ -1.97
CTK3YML112W GDH1P07262 454 aaKnown RBP2.74□□□□□ -1.97
CTK3YML112W PUT2P07275 575 aa2.74□□□□□ -1.97
CTK3YML112W CMK1P27466 446 aaKnown RBP2.74□□□□□ -1.97
CTK3YML112W SLC1P33333 303 aa2.74□□□□□ -1.97
CTK3YML112W LOS1P33418 1100 aaPredicted RBP2.74□□□□□ -1.97
CTK3YML112W DBP8P38719 431 aa2.74□□□□□ -1.97
CTK3YML112W YNG2P38806 282 aaKnown RBP2.74□□□□□ -1.97
CTK3YML112W YTA12P40341 825 aa2.74□□□□□ -1.97
CTK3YML112W PYK2P52489 506 aaKnown RBP2.74□□□□□ -1.97
CTK3YML112W ERG26P53199 349 aaKnown RBP2.74□□□□□ -1.97
CTK3YML112W SAM50P53969 484 aa2.74□□□□□ -1.97
CTK3YML112W DIC1Q06143 298 aa2.74□□□□□ -1.97
CTK3YML112W PSR1Q07800 427 aa2.74□□□□□ -1.97
CTK3YML112W RSA1Q08932 381 aa2.74□□□□□ -1.97
CTK3YML112W YOL087CQ99247 1116 aa2.74□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms