RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	TAF6	P53040	516 aa		15.36	■□□□□ 0.05
CCC1	YLR220W	YPL113C	Q02961	396 aa		15.36	■□□□□ 0.05
CCC1	YLR220W	NHP10	Q03435	203 aa		15.36	■□□□□ 0.05
CCC1	YLR220W	YPL247C	Q12523	523 aa		15.36	■□□□□ 0.05
CCC1	YLR220W	FMP27	Q06179	2628 aa		15.36	■□□□□ 0.05
CCC1	YLR220W	COX6	P00427	148 aa		15.35	■□□□□ 0.05
CCC1	YLR220W	YSC84	P32793	468 aa		15.35	■□□□□ 0.05
CCC1	YLR220W	YBR062C	P38239	180 aa		15.35	■□□□□ 0.05
CCC1	YLR220W	YHR020W	P38708	688 aa	Known RBP	15.35	■□□□□ 0.05
CCC1	YLR220W	SSN3	P39073	555 aa		15.35	■□□□□ 0.05
CCC1	YLR220W	RCO1	Q04779	684 aa		15.35	■□□□□ 0.05
CCC1	YLR220W	HEL2	Q05580	639 aa	Known RBP	15.35	■□□□□ 0.05
CCC1	YLR220W	CRN1	Q06440	651 aa		15.35	■□□□□ 0.05
CCC1	YLR220W	VPS68	Q12016	184 aa		15.35	■□□□□ 0.05
CCC1	YLR220W	PHO5	P00635	467 aa		15.34	■□□□□ 0.05
CCC1	YLR220W	SBP1	P10080	294 aa	Known RBP	15.34	■□□□□ 0.05
CCC1	YLR220W	RPB4	P20433	221 aa	Predicted RBP	15.34	■□□□□ 0.05
CCC1	YLR220W	YSR3	P23501	404 aa		15.34	■□□□□ 0.05
CCC1	YLR220W	SNT1	P25357	1226 aa		15.34	■□□□□ 0.05
CCC1	YLR220W	CIN8	P27895	1000 aa		15.34	■□□□□ 0.05
CCC1	YLR220W	SLX5	P32828	619 aa	Known RBP	15.34	■□□□□ 0.05
CCC1	YLR220W	ASK1	P35734	292 aa		15.34	■□□□□ 0.05
CCC1	YLR220W	EFM1	P38732	585 aa		15.34	■□□□□ 0.05
CCC1	YLR220W	AXL1	P40851	1208 aa		15.34	■□□□□ 0.05
CCC1	YLR220W	MAD3	P47074	515 aa		15.34	■□□□□ 0.05
CCC1	YLR220W	CLD1	P53264	445 aa		15.34	■□□□□ 0.05
CCC1	YLR220W	YML119W	Q03208	357 aa		15.34	■□□□□ 0.05
CCC1	YLR220W	GOT1	Q03554	138 aa		15.34	■□□□□ 0.05
CCC1	YLR220W	TRM12	Q04235	462 aa		15.34	■□□□□ 0.05
CCC1	YLR220W	TMA46	Q12000	345 aa	Known RBP	15.34	■□□□□ 0.05
CCC1	YLR220W	APC9	Q12107	265 aa		15.34	■□□□□ 0.05
CCC1	YLR220W	SWI5	P08153	709 aa		15.33	■□□□□ 0.04
CCC1	YLR220W	YMR085W	P0CF18	432 aa		15.33	■□□□□ 0.04
CCC1	YLR220W	YCR090C	P25654	182 aa	Known RBP	15.33	■□□□□ 0.04
CCC1	YLR220W	YPT52	P36018	234 aa	Known RBP	15.33	■□□□□ 0.04
CCC1	YLR220W	SRX1	P36077	127 aa		15.33	■□□□□ 0.04
CCC1	YLR220W	YHR045W	P38775	560 aa		15.33	■□□□□ 0.04
CCC1	YLR220W	PCF11	P39081	626 aa	Predicted RBP	15.33	■□□□□ 0.04
CCC1	YLR220W	TEL2	P53038	688 aa		15.33	■□□□□ 0.04
CCC1	YLR220W	SSL1	Q04673	461 aa	Predicted RBP	15.33	■□□□□ 0.04
CCC1	YLR220W	ARG7	Q04728	441 aa		15.33	■□□□□ 0.04
CCC1	YLR220W	NOT5	Q12514	560 aa	Predicted RBP	15.33	■□□□□ 0.04
CCC1	YLR220W	POL30	P15873	258 aa	Known RBP	15.32	■□□□□ 0.04
CCC1	YLR220W	HEM3	P28789	327 aa		15.32	■□□□□ 0.04
CCC1	YLR220W	YDR089W	P38966	869 aa		15.32	■□□□□ 0.04
CCC1	YLR220W	YJL070C	P40361	888 aa		15.32	■□□□□ 0.04
CCC1	YLR220W	SHE9	Q04172	456 aa		15.32	■□□□□ 0.04
CCC1	YLR220W	EMI1	Q04406	187 aa		15.32	■□□□□ 0.04
CCC1	YLR220W	SRO7	Q12038	1033 aa		15.32	■□□□□ 0.04
CCC1	YLR220W	TUB1	P09733	447 aa	Known RBP	15.31	■□□□□ 0.04
CCC1	YLR220W	SPT15	P13393	240 aa	Known RBP	15.31	■□□□□ 0.04
CCC1	YLR220W	VPS34	P22543	875 aa		15.31	■□□□□ 0.04
CCC1	YLR220W	HSM3	P38348	480 aa		15.31	■□□□□ 0.04
CCC1	YLR220W	PFS1	P38872	237 aa		15.31	■□□□□ 0.04
CCC1	YLR220W	NNF1	P47149	201 aa		15.31	■□□□□ 0.04
CCC1	YLR220W	SNO2	P53823	222 aa		15.31	■□□□□ 0.04
CCC1	YLR220W	TVP15	Q03860	143 aa		15.31	■□□□□ 0.04
CCC1	YLR220W	ARX1	Q03862	593 aa	Known RBP	15.31	■□□□□ 0.04
CCC1	YLR220W	ENT4	Q07872	247 aa		15.31	■□□□□ 0.04
CCC1	YLR220W	YOL019W	Q08157	551 aa		15.31	■□□□□ 0.04
CCC1	YLR220W	ALR1	Q08269	859 aa		15.31	■□□□□ 0.04
CCC1	YLR220W	HEM2	P05373	342 aa		15.3	■□□□□ 0.04
CCC1	YLR220W	RHO2	P06781	192 aa		15.3	■□□□□ 0.04
CCC1	YLR220W	YAR066W	P0CX18	203 aa		15.3	■□□□□ 0.04
CCC1	YLR220W	YHR214W	P0CX19	203 aa		15.3	■□□□□ 0.04
CCC1	YLR220W	HSC82	P15108	705 aa	Known RBP	15.3	■□□□□ 0.04
CCC1	YLR220W	NIP1	P32497	812 aa	Known RBP	15.3	■□□□□ 0.04
CCC1	YLR220W	MGS1	P40151	587 aa		15.3	■□□□□ 0.04
CCC1	YLR220W	AIF1	P52923	378 aa		15.3	■□□□□ 0.04
CCC1	YLR220W	ZRG17	P53735	605 aa		15.3	■□□□□ 0.04
CCC1	YLR220W	RMI1	Q02685	241 aa		15.3	■□□□□ 0.04
CCC1	YLR220W	SEC10	Q06245	871 aa		15.3	■□□□□ 0.04
CCC1	YLR220W	GRS2	Q06817	618 aa		15.3	■□□□□ 0.04
CCC1	YLR220W	TRM8	Q12009	286 aa		15.3	■□□□□ 0.04
CCC1	YLR220W	NHA1	Q99271	985 aa		15.3	■□□□□ 0.04
CCC1	YLR220W	YPR089W	O13585	888 aa		15.29	■□□□□ 0.04
CCC1	YLR220W	VAC17	P25591	423 aa		15.29	■□□□□ 0.04
CCC1	YLR220W	SKT5	P34226	696 aa		15.29	■□□□□ 0.04
CCC1	YLR220W	COA1	P40452	197 aa		15.29	■□□□□ 0.04
CCC1	YLR220W	YNL035C	P53962	389 aa	Known RBP	15.29	■□□□□ 0.04
CCC1	YLR220W	TAF12	Q03761	539 aa		15.29	■□□□□ 0.04
CCC1	YLR220W	RSC3	Q06639	885 aa		15.29	■□□□□ 0.04
CCC1	YLR220W	MCD1	Q12158	566 aa		15.29	■□□□□ 0.04
CCC1	YLR220W	MET8	P15807	274 aa		15.28	■□□□□ 0.04
CCC1	YLR220W	TIS11	P47977	285 aa		15.28	■□□□□ 0.04
CCC1	YLR220W	SLM2	P53955	656 aa		15.28	■□□□□ 0.04
CCC1	YLR220W	HDA3	Q06623	655 aa		15.28	■□□□□ 0.04
CCC1	YLR220W	VAM6	Q07468	1049 aa		15.28	■□□□□ 0.04
CCC1	YLR220W	RSC6	P25632	483 aa		15.27	■□□□□ 0.04
CCC1	YLR220W	RPF2	P36160	344 aa	Known RBP	15.27	■□□□□ 0.04
CCC1	YLR220W	CTP1	P38152	299 aa		15.27	■□□□□ 0.04
CCC1	YLR220W	YEL073C	P39974	107 aa		15.27	■□□□□ 0.04
CCC1	YLR220W	TIF34	P40217	347 aa	Known RBP	15.27	■□□□□ 0.04
CCC1	YLR220W	BIR1	P47134	954 aa		15.27	■□□□□ 0.04
CCC1	YLR220W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	15.27	■□□□□ 0.04	not detected
CCC1	YLR220W	PLB3	Q08108	686 aa		15.27	■□□□□ 0.04
CCC1	YLR220W	STB3	Q12427	513 aa		15.27	■□□□□ 0.04
CCC1	YLR220W	COX3	P00420	269 aa		15.26	■□□□□ 0.03
CCC1	YLR220W	FUM1	P08417	488 aa	Known RBP	15.26	■□□□□ 0.03
CCC1	YLR220W	RRN3	P36070	627 aa		15.26	■□□□□ 0.03

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