RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTM1	YKL039W	FCP1	Q03254	732 aa		4.58	□□□□□ -1.68
PTM1	YKL039W	PFA5	Q03289	374 aa		4.58	□□□□□ -1.68
PTM1	YKL039W	GSH2	Q08220	491 aa		4.58	□□□□□ -1.68
PTM1	YKL039W	GPN2	Q08726	347 aa	Predicted RBP	4.58	□□□□□ -1.68
PTM1	YKL039W	UBX3	Q12229	455 aa		4.58	□□□□□ -1.68
PTM1	YKL039W	RPL42A	P0CX27	106 aa	Known RBP	4.57	□□□□□ -1.68
PTM1	YKL039W	RPL42B	P0CX28	106 aa	Known RBP	4.57	□□□□□ -1.68
PTM1	YKL039W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
PTM1	YKL039W	CNS1	P33313	385 aa		4.57	□□□□□ -1.68
PTM1	YKL039W	AXL2	P38928	823 aa		4.57	□□□□□ -1.68
PTM1	YKL039W	RIC1	P40395	1056 aa		4.57	□□□□□ -1.68
PTM1	YKL039W	VPS25	P47142	202 aa		4.57	□□□□□ -1.68
PTM1	YKL039W	RSM28	Q03430	361 aa		4.57	□□□□□ -1.68
PTM1	YKL039W	MLH2	Q07980	695 aa		4.57	□□□□□ -1.68
PTM1	YKL039W	DSE3	Q08729	430 aa		4.57	□□□□□ -1.68
PTM1	YKL039W	SLC1	P33333	303 aa		4.57	□□□□□ -1.68
PTM1	YKL039W	YML131W	Q03102	365 aa		4.57	□□□□□ -1.68
PTM1	YKL039W	ECM16	Q04217	1267 aa	Known RBP	4.57	□□□□□ -1.68
PTM1	YKL039W	YLR112W	Q12130	139 aa		4.57	□□□□□ -1.68
PTM1	YKL039W	YOR019W	Q99248	730 aa		4.57	□□□□□ -1.68
PTM1	YKL039W	YLR302C	O13544	120 aa		4.56	□□□□□ -1.68
PTM1	YKL039W	RPB2	P08518	1224 aa	Known RBP	4.56	□□□□□ -1.68
PTM1	YKL039W	YER010C	P40011	234 aa		4.56	□□□□□ -1.68
PTM1	YKL039W	YFR020W	P43600	232 aa		4.56	□□□□□ -1.68
PTM1	YKL039W	IML2	P47031	731 aa		4.56	□□□□□ -1.68
PTM1	YKL039W	SNA4	Q07549	140 aa		4.56	□□□□□ -1.68
PTM1	YKL039W	RAV1	P47104	1357 aa		4.56	□□□□□ -1.68
PTM1	YKL039W	MRP20	P32387	263 aa		4.55	□□□□□ -1.68
PTM1	YKL039W	LEU5	P38702	357 aa		4.55	□□□□□ -1.68
PTM1	YKL039W	FMP10	P40098	244 aa		4.55	□□□□□ -1.68
PTM1	YKL039W	BOP3	P53958	396 aa		4.55	□□□□□ -1.68
PTM1	YKL039W	IZH1	Q03419	316 aa		4.55	□□□□□ -1.68
PTM1	YKL039W	RCO1	Q04779	684 aa		4.55	□□□□□ -1.68
PTM1	YKL039W	POS5	Q06892	414 aa		4.55	□□□□□ -1.68
PTM1	YKL039W	URB1	P34241	1764 aa	Known RBP	4.55	□□□□□ -1.68
PTM1	YKL039W	YFL068W	P0CX99	160 aa		4.54	□□□□□ -1.68
PTM1	YKL039W	YLL066W-A	P0CY00	160 aa		4.54	□□□□□ -1.68
PTM1	YKL039W	YLL067W-A	P0CY01	160 aa		4.54	□□□□□ -1.68
PTM1	YKL039W	RAP1	P11938	827 aa		4.54	□□□□□ -1.68
PTM1	YKL039W	TKL1	P23254	680 aa	Known RBP	4.54	□□□□□ -1.68
PTM1	YKL039W	MNN2	P38069	597 aa		4.54	□□□□□ -1.68
PTM1	YKL039W	SEC24	P40482	926 aa	Known RBP	4.54	□□□□□ -1.68
PTM1	YKL039W	ROM2	P51862	1356 aa	Known RBP	4.54	□□□□□ -1.68
PTM1	YKL039W	YTP1	P53584	459 aa		4.54	□□□□□ -1.68
PTM1	YKL039W	ARP9	Q05123	467 aa		4.54	□□□□□ -1.68
PTM1	YKL039W	YMR034C	Q05131	434 aa	Predicted RBP	4.54	□□□□□ -1.68
PTM1	YKL039W	TRX2	P22803	104 aa	Known RBP	4.53	□□□□□ -1.68
PTM1	YKL039W	CLB2	P24869	491 aa		4.53	□□□□□ -1.68
PTM1	YKL039W	CBF2	P32504	956 aa		4.53	□□□□□ -1.68
PTM1	YKL039W	ARC40	P38328	384 aa	Known RBP	4.53	□□□□□ -1.68
PTM1	YKL039W	PCL6	P40038	420 aa		4.53	□□□□□ -1.68
PTM1	YKL039W	IME4	P41833	600 aa		4.53	□□□□□ -1.68
PTM1	YKL039W	SNO4	Q04902	237 aa		4.53	□□□□□ -1.68
PTM1	YKL039W	HSP33	Q08914	237 aa	Known RBP	4.53	□□□□□ -1.68
PTM1	YKL039W	HSP32	Q08992	237 aa		4.53	□□□□□ -1.68
PTM1	YKL039W	YOL087C	Q99247	1116 aa		4.53	□□□□□ -1.68
PTM1	YKL039W	RAD9	P14737	1309 aa		4.53	□□□□□ -1.68
PTM1	YKL039W	YCR043C	P25361	127 aa		4.53	□□□□□ -1.69
PTM1	YKL039W	SAC1	P32368	623 aa	Known RBP	4.53	□□□□□ -1.69
PTM1	YKL039W	KAP123	P40069	1113 aa	Known RBP	4.53	□□□□□ -1.69
PTM1	YKL039W	NUP53	Q03790	475 aa		4.53	□□□□□ -1.69
PTM1	YKL039W	TDA9	Q04545	1251 aa		4.53	□□□□□ -1.69
PTM1	YKL039W	SSP2	Q08646	371 aa		4.53	□□□□□ -1.69
PTM1	YKL039W	SRL1	Q08673	210 aa		4.53	□□□□□ -1.69
PTM1	YKL039W	NUS1	Q12063	375 aa		4.53	□□□□□ -1.69
PTM1	YKL039W	ATG9	Q12142	997 aa		4.53	□□□□□ -1.69
PTM1	YKL039W	TY4B-H	P0C2J7	1802 aa		4.52	□□□□□ -1.69
PTM1	YKL039W	TY4B-J	P47024	1803 aa		4.52	□□□□□ -1.69
PTM1	YKL039W	PSK1	P31374	1356 aa		4.52	□□□□□ -1.69
PTM1	YKL039W	CDC15	P27636	974 aa		4.52	□□□□□ -1.69
PTM1	YKL039W	RRN3	P36070	627 aa		4.52	□□□□□ -1.69
PTM1	YKL039W	ESL2	P36168	1195 aa		4.52	□□□□□ -1.69
PTM1	YKL039W	PIL1	P53252	339 aa	Known RBP	4.52	□□□□□ -1.69
PTM1	YKL039W	LSC1	P53598	329 aa	Known RBP	4.52	□□□□□ -1.69
PTM1	YKL039W	ECI1	Q05871	280 aa		4.52	□□□□□ -1.69
PTM1	YKL039W	YOL159C	Q08300	171 aa		4.52	□□□□□ -1.69
PTM1	YKL039W	BUD7	Q08754	746 aa		4.52	□□□□□ -1.69
PTM1	YKL039W	NEW1	Q08972	1196 aa	Known RBP	4.52	□□□□□ -1.69
PTM1	YKL039W	PKP1	P40530	394 aa		4.51	□□□□□ -1.69
PTM1	YKL039W	TES1	P41903	349 aa	Known RBP	4.51	□□□□□ -1.69
PTM1	YKL039W	IST1	P53843	298 aa	Predicted RBP	4.51	□□□□□ -1.69
PTM1	YKL039W	ESBP6	P53918	673 aa		4.51	□□□□□ -1.69
PTM1	YKL039W	MCP2	Q06567	569 aa		4.51	□□□□□ -1.69
PTM1	YKL039W	FKS3	Q04952	1785 aa		4.51	□□□□□ -1.69
PTM1	YKL039W	IKI3	Q06706	1349 aa	Known RBP	4.5	□□□□□ -1.69
PTM1	YKL039W	YBR085C-A	O43137	85 aa		4.5	□□□□□ -1.69
PTM1	YKL039W	ALY1	P36117	915 aa		4.5	□□□□□ -1.69
PTM1	YKL039W	RFC1	P38630	861 aa	Known RBP	4.5	□□□□□ -1.69
PTM1	YKL039W	SLZ1	P40167	298 aa		4.5	□□□□□ -1.69
PTM1	YKL039W	DOT5	P40553	215 aa		4.5	□□□□□ -1.69
PTM1	YKL039W	SGF73	P53165	657 aa		4.5	□□□□□ -1.69
PTM1	YKL039W	INN1	P53901	409 aa		4.5	□□□□□ -1.69
PTM1	YKL039W	MUB1	Q03162	620 aa		4.5	□□□□□ -1.69
PTM1	YKL039W	UTP21	Q06078	939 aa	Predicted RBP	4.5	□□□□□ -1.69
PTM1	YKL039W	HXK2	P04807	486 aa	Known RBP	4.49	□□□□□ -1.69
PTM1	YKL039W	CBP1	P07252	654 aa		4.49	□□□□□ -1.69
PTM1	YKL039W	NPR2	P39923	615 aa		4.49	□□□□□ -1.69
PTM1	YKL039W	HXT9	P40885	567 aa		4.49	□□□□□ -1.69
PTM1	YKL039W	ARP10	Q04549	284 aa		4.49	□□□□□ -1.69
PTM1	YKL039W	EFM2	P38347	419 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 74.5 ms