RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W YFR020WP43600 232 aa2.64□□□□□ -1.99
PEP8YJL053W INA17Q02888 182 aa2.64□□□□□ -1.99
PEP8YJL053W YMR178WQ03219 274 aaKnown RBP2.64□□□□□ -1.99
PEP8YJL053W ECI1Q05871 280 aa2.64□□□□□ -1.99
PEP8YJL053W MCP2Q06567 569 aa2.64□□□□□ -1.99
PEP8YJL053W RIX7Q07844 837 aaKnown RBP2.64□□□□□ -1.99
PEP8YJL053W HUA2Q12134 243 aa2.64□□□□□ -1.99
PEP8YJL053W INP53Q12271 1107 aa2.64□□□□□ -1.99
PEP8YJL053W ENT1Q12518 454 aa2.64□□□□□ -1.99
PEP8YJL053W CDC16P09798 840 aa2.63□□□□□ -1.99
PEP8YJL053W ADH7P25377 361 aa2.63□□□□□ -1.99
PEP8YJL053W SAC6P32599 642 aaKnown RBP2.63□□□□□ -1.99
PEP8YJL053W RTS1P38903 757 aa2.63□□□□□ -1.99
PEP8YJL053W NAB3P38996 802 aaKnown RBP RIP-Chip data2.63□□□□□ -1.99not detected
PEP8YJL053W YEL068CP39977 110 aa2.63□□□□□ -1.99
PEP8YJL053W SIP4P46954 829 aa2.63□□□□□ -1.99
PEP8YJL053W DIA3P52290 468 aa2.63□□□□□ -1.99
PEP8YJL053W YGL036WP53185 909 aaPredicted RBP2.63□□□□□ -1.99
PEP8YJL053W PIL1P53252 339 aaKnown RBP2.63□□□□□ -1.99
PEP8YJL053W EAF7P53911 425 aaKnown RBP2.63□□□□□ -1.99
PEP8YJL053W ZDS2P54786 942 aa2.63□□□□□ -1.99
PEP8YJL053W ADD37Q03233 198 aa2.63□□□□□ -1.99
PEP8YJL053W CAC2Q04199 468 aa2.63□□□□□ -1.99
PEP8YJL053W YLR352WQ06479 807 aa2.63□□□□□ -1.99
PEP8YJL053W POS5Q06892 414 aa2.63□□□□□ -1.99
PEP8YJL053W ENT4Q07872 247 aa2.63□□□□□ -1.99
PEP8YJL053W YER145C-AA0A023PYF4 145 aa2.62□□□□□ -1.99
PEP8YJL053W SEM1O94742 89 aa2.62□□□□□ -1.99
PEP8YJL053W RPB8P20436 146 aa2.62□□□□□ -1.99
PEP8YJL053W TKL1P23254 680 aaKnown RBP2.62□□□□□ -1.99
PEP8YJL053W CLB2P24869 491 aa2.62□□□□□ -1.99
PEP8YJL053W LCB1P25045 558 aaKnown RBP2.62□□□□□ -1.99
PEP8YJL053W PAH1P32567 862 aa2.62□□□□□ -1.99
PEP8YJL053W SNU114P36048 1008 aaKnown RBP2.62□□□□□ -1.99
PEP8YJL053W NOP4P37838 685 aaKnown RBP2.62□□□□□ -1.99
PEP8YJL053W RFC1P38630 861 aaKnown RBP2.62□□□□□ -1.99
PEP8YJL053W BUR6P40096 142 aa2.62□□□□□ -1.99
PEP8YJL053W FMP10P40098 244 aa2.62□□□□□ -1.99
PEP8YJL053W LYS14P40971 790 aa2.62□□□□□ -1.99
PEP8YJL053W RPS7BP48164 190 aaKnown RBP2.62□□□□□ -1.99
PEP8YJL053W STR3P53101 465 aaKnown RBP2.62□□□□□ -1.99
PEP8YJL053W YGR127WP53275 312 aa2.62□□□□□ -1.99
PEP8YJL053W YNR061CP53747 219 aa2.62□□□□□ -1.99
PEP8YJL053W YNL234WP53857 426 aa2.62□□□□□ -1.99
PEP8YJL053W INN1P53901 409 aa2.62□□□□□ -1.99
PEP8YJL053W YSA1Q01976 231 aa2.62□□□□□ -1.99
PEP8YJL053W CTL1Q03220 320 aaKnown RBP2.62□□□□□ -1.99
PEP8YJL053W RAD30Q04049 632 aa2.62□□□□□ -1.99
PEP8YJL053W ARP10Q04549 284 aa2.62□□□□□ -1.99
PEP8YJL053W UTP21Q06078 939 aaPredicted RBP2.62□□□□□ -1.99
PEP8YJL053W BUD21Q08492 214 aaPredicted RBP2.62□□□□□ -1.99
PEP8YJL053W FRE3Q08905 711 aa2.62□□□□□ -1.99
PEP8YJL053W TAH18Q12181 623 aa2.62□□□□□ -1.99
PEP8YJL053W NOP58Q12499 511 aaKnown RBP2.62□□□□□ -1.99
PEP8YJL053W YBR126W-AQ8TGU7 68 aa2.62□□□□□ -1.99
PEP8YJL053W RPL19AP0CX82 189 aaKnown RBP2.61□□□□□ -1.99
PEP8YJL053W RPL19BP0CX83 189 aaPredicted RBP2.61□□□□□ -1.99
PEP8YJL053W MIA40P36046 403 aa2.61□□□□□ -1.99
PEP8YJL053W MUD2P36084 527 aaKnown RBP2.61□□□□□ -1.99
PEP8YJL053W MAL33P38157 468 aa2.61□□□□□ -1.99
PEP8YJL053W VPS41P38959 992 aa2.61□□□□□ -1.99
PEP8YJL053W AFG3P39925 761 aa2.61□□□□□ -1.99
PEP8YJL053W NOP16P40007 231 aaKnown RBP2.61□□□□□ -1.99
PEP8YJL053W YNL181WP53878 407 aa2.61□□□□□ -1.99
PEP8YJL053W BUD22Q04347 519 aaKnown RBP2.61□□□□□ -1.99
PEP8YJL053W ETT1Q08421 412 aaKnown RBP2.61□□□□□ -1.99
PEP8YJL053W LEU9Q12166 604 aaKnown RBP2.61□□□□□ -1.99
PEP8YJL053W CYB2P00175 591 aa2.6□□□□□ -1.99
PEP8YJL053W SEC53P07283 254 aaKnown RBP2.6□□□□□ -1.99
PEP8YJL053W CHO1P08456 276 aa2.6□□□□□ -1.99
PEP8YJL053W PWP1P21304 576 aaKnown RBP2.6□□□□□ -1.99
PEP8YJL053W YIH1P25637 258 aa2.6□□□□□ -1.99
PEP8YJL053W GAC1P28006 793 aa2.6□□□□□ -1.99
PEP8YJL053W DBP8P38719 431 aa2.6□□□□□ -1.99
PEP8YJL053W FAR3P46671 204 aa2.6□□□□□ -1.99
PEP8YJL053W SGM1P47166 707 aa2.6□□□□□ -1.99
PEP8YJL053W SHE10P53075 577 aa2.6□□□□□ -1.99
PEP8YJL053W SGF73P53165 657 aa2.6□□□□□ -1.99
PEP8YJL053W DUO1P53168 247 aaKnown RBP2.6□□□□□ -1.99
PEP8YJL053W YTP1P53584 459 aa2.6□□□□□ -1.99
PEP8YJL053W ASI1P54074 624 aa2.6□□□□□ -1.99
PEP8YJL053W SVL3Q03088 825 aaKnown RBP2.6□□□□□ -1.99
PEP8YJL053W VPS72Q03388 795 aa2.6□□□□□ -1.99
PEP8YJL053W IZH1Q03419 316 aa2.6□□□□□ -1.99
PEP8YJL053W YML037CQ03703 340 aa2.6□□□□□ -1.99
PEP8YJL053W TMA64Q04600 565 aaKnown RBP2.6□□□□□ -1.99
PEP8YJL053W YDR056CQ12025 205 aa2.6□□□□□ -1.99
PEP8YJL053W ATG9Q12142 997 aa2.6□□□□□ -1.99
PEP8YJL053W ARG81P05085 880 aa2.59□□□□□ -1.99
PEP8YJL053W PCA1P38360 1216 aa2.59□□□□□ -1.99
PEP8YJL053W FLC2P39719 783 aa2.59□□□□□ -1.99
PEP8YJL053W PCL6P40038 420 aa2.59□□□□□ -1.99
PEP8YJL053W IAH1P41734 238 aa2.59□□□□□ -1.99
PEP8YJL053W PTR3P43606 678 aa2.59□□□□□ -1.99
PEP8YJL053W EMI2Q04409 500 aaKnown RBP2.59□□□□□ -1.99
PEP8YJL053W VIP1Q06685 1146 aaKnown RBP2.59□□□□□ -1.99
PEP8YJL053W RCN2Q12044 265 aa2.59□□□□□ -1.99
PEP8YJL053W YLR112WQ12130 139 aa2.59□□□□□ -1.99
PEP8YJL053W EDE1P34216 1381 aa2.59□□□□□ -2
PEP8YJL053W MF(ALPHA)1P01149 165 aa2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 258.7 ms