RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C HIS6P40545 261 aa3.29□□□□□ -1.88
YIR040CYIR040C SHR5P41912 237 aa3.29□□□□□ -1.88
YIR040CYIR040C IRC6P43615 237 aa3.29□□□□□ -1.88
YIR040CYIR040C DLD2P46681 530 aaKnown RBP3.29□□□□□ -1.88
YIR040CYIR040C YJR039WP47107 1121 aa3.29□□□□□ -1.88
YIR040CYIR040C HSH155P49955 971 aaKnown RBP3.29□□□□□ -1.88
YIR040CYIR040C YGR042WP53227 271 aa3.29□□□□□ -1.88
YIR040CYIR040C HEF3P53978 1044 aaKnown RBP3.29□□□□□ -1.88
YIR040CYIR040C KTR6P54070 446 aa3.29□□□□□ -1.88
YIR040CYIR040C ATC1Q04005 294 aa3.29□□□□□ -1.88
YIR040CYIR040C DLT1Q04216 342 aa3.29□□□□□ -1.88
YIR040CYIR040C GYL1Q04322 720 aa3.29□□□□□ -1.88
YIR040CYIR040C EMI2Q04409 500 aaKnown RBP3.29□□□□□ -1.88
YIR040CYIR040C GTO3Q04806 366 aa3.29□□□□□ -1.88
YIR040CYIR040C BCH1Q05029 724 aa3.29□□□□□ -1.88
YIR040CYIR040C CRR1Q05790 422 aa3.29□□□□□ -1.88
YIR040CYIR040C VPS38Q05919 439 aa3.29□□□□□ -1.88
YIR040CYIR040C NDE2Q07500 545 aa3.29□□□□□ -1.88
YIR040CYIR040C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
YIR040CYIR040C THI73Q07904 523 aa3.29□□□□□ -1.88
YIR040CYIR040C RRT8Q08219 342 aa3.29□□□□□ -1.88
YIR040CYIR040C FRE5Q08908 694 aa3.29□□□□□ -1.88
YIR040CYIR040C ATG29Q12092 213 aa3.29□□□□□ -1.88
YIR040CYIR040C MED2Q12124 431 aa3.29□□□□□ -1.88
YIR040CYIR040C FRE6Q12473 712 aa3.29□□□□□ -1.88
YIR040CYIR040C SKS1Q12505 502 aa3.29□□□□□ -1.88
YIR040CYIR040C HTZ1Q12692 134 aaKnown RBP3.29□□□□□ -1.88
YIR040CYIR040C YLR149CQ99296 730 aa3.29□□□□□ -1.88
YIR040CYIR040C RAV1P47104 1357 aa3.28□□□□□ -1.88
YIR040CYIR040C YPR089WO13585 888 aa3.28□□□□□ -1.88
YIR040CYIR040C PPR1P07272 904 aaPredicted RBP3.28□□□□□ -1.88
YIR040CYIR040C CHS1P08004 1131 aa3.28□□□□□ -1.88
YIR040CYIR040C CAF20P12962 161 aaKnown RBP3.28□□□□□ -1.88
YIR040CYIR040C SFL1P20134 766 aa3.28□□□□□ -1.88
YIR040CYIR040C PEX1P24004 1043 aa3.28□□□□□ -1.88
YIR040CYIR040C STE50P25344 346 aa3.28□□□□□ -1.88
YIR040CYIR040C SIN4P32259 974 aa3.28□□□□□ -1.88
YIR040CYIR040C YBL010CP32788 280 aa3.28□□□□□ -1.88
YIR040CYIR040C VAM7P32912 316 aa3.28□□□□□ -1.88
YIR040CYIR040C SEC66P33754 206 aa3.28□□□□□ -1.88
YIR040CYIR040C MTH1P35198 433 aa3.28□□□□□ -1.88
YIR040CYIR040C SRP102P36057 244 aaPredicted RBP3.28□□□□□ -1.88
YIR040CYIR040C MRPL17P36528 281 aa3.28□□□□□ -1.88
YIR040CYIR040C CHK1P38147 527 aa3.28□□□□□ -1.88
YIR040CYIR040C PPS1P38148 807 aa3.28□□□□□ -1.88
YIR040CYIR040C MOH1P38191 138 aa3.28□□□□□ -1.88
YIR040CYIR040C MMS4P38257 691 aa3.28□□□□□ -1.88
YIR040CYIR040C RCK2P38623 610 aa3.28□□□□□ -1.88
YIR040CYIR040C LIN1P38852 340 aaPredicted RBP3.28□□□□□ -1.88
YIR040CYIR040C EGD2P38879 174 aaKnown RBP3.28□□□□□ -1.88
YIR040CYIR040C RPN10P38886 268 aaKnown RBP3.28□□□□□ -1.88
YIR040CYIR040C REV7P38927 245 aa3.28□□□□□ -1.88
YIR040CYIR040C SAW1P39735 261 aa3.28□□□□□ -1.88
YIR040CYIR040C YER137CP40083 148 aaKnown RBP3.28□□□□□ -1.88
YIR040CYIR040C SCC4P40090 624 aa3.28□□□□□ -1.88
YIR040CYIR040C CAF16P43569 289 aa3.28□□□□□ -1.88
YIR040CYIR040C LSM1P47017 172 aaKnown RBP3.28□□□□□ -1.88
YIR040CYIR040C HAM1P47119 197 aaKnown RBP3.28□□□□□ -1.88
YIR040CYIR040C PIB2P53191 635 aa3.28□□□□□ -1.88
YIR040CYIR040C SLX9P53251 210 aaPredicted RBP3.28□□□□□ -1.88
YIR040CYIR040C MEP3P53390 489 aa3.28□□□□□ -1.88
YIR040CYIR040C MNT4P53745 580 aa3.28□□□□□ -1.88
YIR040CYIR040C YNL034WP53963 612 aa3.28□□□□□ -1.88
YIR040CYIR040C YNL018CP53976 612 aa3.28□□□□□ -1.88
YIR040CYIR040C SNP1Q00916 300 aaPredicted RBP3.28□□□□□ -1.88
YIR040CYIR040C MAK10Q02197 733 aa3.28□□□□□ -1.88
YIR040CYIR040C SWP1Q02795 286 aa3.28□□□□□ -1.88
YIR040CYIR040C TFB2Q02939 513 aa3.28□□□□□ -1.88
YIR040CYIR040C NRG1Q03125 231 aa3.28□□□□□ -1.88
YIR040CYIR040C RMT2Q03305 412 aa3.28□□□□□ -1.88
YIR040CYIR040C YMR206WQ03695 313 aa3.28□□□□□ -1.88
YIR040CYIR040C SEG1Q04279 960 aa3.28□□□□□ -1.88
YIR040CYIR040C URC2Q04411 772 aa3.28□□□□□ -1.88
YIR040CYIR040C VBA4Q04602 768 aaKnown RBP3.28□□□□□ -1.88
YIR040CYIR040C SPH1Q06160 661 aa3.28□□□□□ -1.88
YIR040CYIR040C YPR091CQ06833 770 aa3.28□□□□□ -1.88
YIR040CYIR040C CMS1Q07897 291 aaKnown RBP3.28□□□□□ -1.88
YIR040CYIR040C NTG2Q08214 380 aa3.28□□□□□ -1.88
YIR040CYIR040C RSA1Q08932 381 aa3.28□□□□□ -1.88
YIR040CYIR040C FMP40Q08968 688 aaPredicted RBP3.28□□□□□ -1.88
YIR040CYIR040C YPL272CQ08984 517 aa3.28□□□□□ -1.88
YIR040CYIR040C TGL5Q12043 749 aa3.28□□□□□ -1.88
YIR040CYIR040C RTR2Q12378 196 aa3.28□□□□□ -1.88
YIR040CYIR040C GRX6Q12438 231 aa3.28□□□□□ -1.88
YIR040CYIR040C YKL068W-AQ3E826 78 aa3.28□□□□□ -1.88
YIR040CYIR040C RAD61Q99359 647 aa3.28□□□□□ -1.88
YIR040CYIR040C Q0142Q9ZZW4 58 aa3.28□□□□□ -1.88
YIR040CYIR040C SMC4Q12267 1418 aa3.27□□□□□ -1.89
YIR040CYIR040C HIS4P00815 799 aaKnown RBP3.27□□□□□ -1.89
YIR040CYIR040C CDC36P06100 191 aaPredicted RBP3.27□□□□□ -1.89
YIR040CYIR040C MET3P08536 511 aa3.27□□□□□ -1.89
YIR040CYIR040C MET8P15807 274 aa3.27□□□□□ -1.89
YIR040CYIR040C URA4P20051 364 aa3.27□□□□□ -1.89
YIR040CYIR040C DBP3P20447 523 aaKnown RBP3.27□□□□□ -1.89
YIR040CYIR040C KGD1P20967 1014 aaKnown RBP3.27□□□□□ -1.89
YIR040CYIR040C SAN1P22470 610 aa3.27□□□□□ -1.89
YIR040CYIR040C PHO91P27514 894 aa3.27□□□□□ -1.89
YIR040CYIR040C FRD1P32614 470 aaKnown RBP3.27□□□□□ -1.89
YIR040CYIR040C COT1P32798 439 aa3.27□□□□□ -1.89
YIR040CYIR040C BEM3P32873 1128 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms