RNA–Protein interactions for RNA: YHR009C

TDA3, Transcript of Putative oxidoreductase involved in late endosome to Golgi transport, yeast

Gene TDA3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TDA3	YHR009C	YRF1-4	O13559	1382 aa		4.25	□□□□□ -1.73
TDA3	YHR009C	MRP13	P12686	339 aa		4.24	□□□□□ -1.73
TDA3	YHR009C	APE1	P14904	514 aa		4.24	□□□□□ -1.73
TDA3	YHR009C	STE50	P25344	346 aa		4.24	□□□□□ -1.73
TDA3	YHR009C	AAD3	P25612	363 aa		4.24	□□□□□ -1.73
TDA3	YHR009C	YCR051W	P25631	222 aa		4.24	□□□□□ -1.73
TDA3	YHR009C	VPH1	P32563	840 aa	Known RBP	4.24	□□□□□ -1.73
TDA3	YHR009C	OTU2	P38747	307 aa	Known RBP	4.24	□□□□□ -1.73
TDA3	YHR009C	ELO1	P39540	310 aa		4.24	□□□□□ -1.73
TDA3	YHR009C	ALG5	P40350	334 aa		4.24	□□□□□ -1.73
TDA3	YHR009C	BNI5	P53890	448 aa	Known RBP	4.24	□□□□□ -1.73
TDA3	YHR009C	CIK1	Q01649	594 aa		4.24	□□□□□ -1.73
TDA3	YHR009C	AIM32	Q04689	311 aa		4.24	□□□□□ -1.73
TDA3	YHR009C	YOL159C	Q08300	171 aa		4.24	□□□□□ -1.73
TDA3	YHR009C	ISN1	Q99312	450 aa		4.24	□□□□□ -1.73
TDA3	YHR009C	NAT1	P12945	854 aa	Known RBP	4.23	□□□□□ -1.73
TDA3	YHR009C	CDC43	P18898	376 aa		4.23	□□□□□ -1.73
TDA3	YHR009C	CLB1	P24868	471 aa		4.23	□□□□□ -1.73
TDA3	YHR009C	SAT4	P25333	603 aa	Known RBP	4.23	□□□□□ -1.73
TDA3	YHR009C	PRD1	P25375	712 aa		4.23	□□□□□ -1.73
TDA3	YHR009C	PUP3	P25451	205 aa	Known RBP	4.23	□□□□□ -1.73
TDA3	YHR009C	EMP70	P32802	667 aa		4.23	□□□□□ -1.73
TDA3	YHR009C	SEC66	P33754	206 aa		4.23	□□□□□ -1.73
TDA3	YHR009C	RFC1	P38630	861 aa	Known RBP	4.23	□□□□□ -1.73
TDA3	YHR009C	FAR3	P46671	204 aa		4.23	□□□□□ -1.73
TDA3	YHR009C	APT1	P49435	187 aa	Known RBP	4.23	□□□□□ -1.73
TDA3	YHR009C	HOS2	P53096	452 aa	Predicted RBP	4.23	□□□□□ -1.73
TDA3	YHR009C	IPI3	P53877	555 aa		4.23	□□□□□ -1.73
TDA3	YHR009C	RPA49	Q01080	415 aa	Predicted RBP	4.23	□□□□□ -1.73
TDA3	YHR009C	ARX1	Q03862	593 aa	Known RBP	4.23	□□□□□ -1.73
TDA3	YHR009C	FIN1	Q03898	291 aa		4.23	□□□□□ -1.73
TDA3	YHR009C	DPB4	Q04603	196 aa	Known RBP	4.23	□□□□□ -1.73
TDA3	YHR009C	ARO10	Q06408	635 aa		4.23	□□□□□ -1.73
TDA3	YHR009C	RTT109	Q07794	436 aa		4.23	□□□□□ -1.73
TDA3	YHR009C	MRH1	Q12117	320 aa	Predicted RBP	4.23	□□□□□ -1.73
TDA3	YHR009C	LEU9	Q12166	604 aa	Known RBP	4.23	□□□□□ -1.73
TDA3	YHR009C	SGS1	P35187	1447 aa		4.23	□□□□□ -1.73
TDA3	YHR009C	URA7	P28274	579 aa	Known RBP	4.23	□□□□□ -1.73
TDA3	YHR009C	UGP1	P32861	499 aa	Known RBP	4.23	□□□□□ -1.73
TDA3	YHR009C	ART5	P53244	586 aa	Known RBP	4.23	□□□□□ -1.73
TDA3	YHR009C	GND2	P53319	492 aa		4.23	□□□□□ -1.73
TDA3	YHR009C	SEC39	Q12745	709 aa		4.23	□□□□□ -1.73
TDA3	YHR009C	CHO1	P08456	276 aa		4.22	□□□□□ -1.73
TDA3	YHR009C	HEM1	P09950	548 aa	Predicted RBP	4.22	□□□□□ -1.73
TDA3	YHR009C	REC107	P21651	314 aa		4.22	□□□□□ -1.73
TDA3	YHR009C	MNE1	P24720	663 aa		4.22	□□□□□ -1.73
TDA3	YHR009C	IMG1	P25626	169 aa		4.22	□□□□□ -1.73
TDA3	YHR009C	PAP1	P29468	568 aa	Known RBP	4.22	□□□□□ -1.73
TDA3	YHR009C	YMC1	P32331	307 aa		4.22	□□□□□ -1.73
TDA3	YHR009C	HXT14	P42833	540 aa		4.22	□□□□□ -1.73
TDA3	YHR009C	ZIM17	P42844	174 aa		4.22	□□□□□ -1.73
TDA3	YHR009C	SAE2	P46946	345 aa		4.22	□□□□□ -1.73
TDA3	YHR009C	SMC3	P47037	1230 aa		4.22	□□□□□ -1.73
TDA3	YHR009C	YGR127W	P53275	312 aa		4.22	□□□□□ -1.73
TDA3	YHR009C	OGG1	P53397	376 aa	Predicted RBP	4.22	□□□□□ -1.73
TDA3	YHR009C	YNL058C	P53947	316 aa		4.22	□□□□□ -1.73
TDA3	YHR009C	THI3	Q07471	609 aa		4.22	□□□□□ -1.73
TDA3	YHR009C	ULA1	Q12059	462 aa		4.22	□□□□□ -1.73
TDA3	YHR009C	AQY1	P0CD91	305 aa		4.21	□□□□□ -1.74
TDA3	YHR009C	MRP2	P10663	115 aa	Predicted RBP	4.21	□□□□□ -1.74
TDA3	YHR009C	KRS1	P15180	591 aa	Known RBP	4.21	□□□□□ -1.74
TDA3	YHR009C	ART10	P18634	518 aa	Known RBP	4.21	□□□□□ -1.74
TDA3	YHR009C	SPE2	P21182	396 aa		4.21	□□□□□ -1.74
TDA3	YHR009C	APN1	P22936	367 aa		4.21	□□□□□ -1.74
TDA3	YHR009C	MAK32	P23060	363 aa		4.21	□□□□□ -1.74
TDA3	YHR009C	DPH2	P32461	534 aa		4.21	□□□□□ -1.74
TDA3	YHR009C	RPC34	P32910	317 aa		4.21	□□□□□ -1.74
TDA3	YHR009C	NUP133	P36161	1157 aa		4.21	□□□□□ -1.74
TDA3	YHR009C	APE3	P37302	537 aa	Known RBP	4.21	□□□□□ -1.74
TDA3	YHR009C	MOH1	P38191	138 aa		4.21	□□□□□ -1.74
TDA3	YHR009C	RXT2	P38255	430 aa		4.21	□□□□□ -1.74
TDA3	YHR009C	CDC1	P40986	491 aa		4.21	□□□□□ -1.74
TDA3	YHR009C	YGR016W	P53209	190 aa		4.21	□□□□□ -1.74
TDA3	YHR009C	TMN2	Q04562	672 aa		4.21	□□□□□ -1.74
TDA3	YHR009C	ROY1	Q04847	553 aa		4.21	□□□□□ -1.74
TDA3	YHR009C	RBS1	Q05672	457 aa	Known RBP	4.21	□□□□□ -1.74
TDA3	YHR009C	PAR32	Q12515	295 aa	Known RBP	4.21	□□□□□ -1.74
TDA3	YHR009C	BUD14	P27637	709 aa		4.2	□□□□□ -1.74
TDA3	YHR009C	TOA1	P32773	286 aa		4.2	□□□□□ -1.74
TDA3	YHR009C	MDL1	P33310	695 aa		4.2	□□□□□ -1.74
TDA3	YHR009C	YBL055C	P34220	418 aa	Predicted RBP	4.2	□□□□□ -1.74
TDA3	YHR009C	TSC10	P38342	320 aa		4.2	□□□□□ -1.74
TDA3	YHR009C	CAJ1	P39101	391 aa		4.2	□□□□□ -1.74
TDA3	YHR009C	ERV46	P39727	415 aa		4.2	□□□□□ -1.74
TDA3	YHR009C	PTR3	P43606	678 aa		4.2	□□□□□ -1.74
TDA3	YHR009C	DLD2	P46681	530 aa	Known RBP	4.2	□□□□□ -1.74
TDA3	YHR009C	YJL043W	P47053	257 aa		4.2	□□□□□ -1.74
TDA3	YHR009C	SLI1	P53304	468 aa		4.2	□□□□□ -1.74
TDA3	YHR009C	OAZ1	Q02803	292 aa		4.2	□□□□□ -1.74
TDA3	YHR009C	FMP45	Q07651	309 aa		4.2	□□□□□ -1.74
TDA3	YHR009C	TEN1	Q07921	160 aa		4.2	□□□□□ -1.74
TDA3	YHR009C	YOR389W	Q08912	624 aa		4.2	□□□□□ -1.74
TDA3	YHR009C	PDH1	Q12428	516 aa	Known RBP	4.2	□□□□□ -1.74
TDA3	YHR009C	AFI1	Q99222	893 aa		4.2	□□□□□ -1.74
TDA3	YHR009C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
TDA3	YHR009C	BOS1	P25385	244 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	GSY2	P27472	705 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	ERV1	P27882	189 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	OAR1	P35731	278 aa		4.19	□□□□□ -1.74
TDA3	YHR009C	ICS2	P38284	255 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms