RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W FPR1P20081 114 aaKnown RBP7.76□□□□□ -1.17
SHC1YER096W SEC15P22224 910 aa7.76□□□□□ -1.17
SHC1YER096W PMT1P33775 817 aa7.76□□□□□ -1.17
SHC1YER096W THI80P35202 319 aa7.76□□□□□ -1.17
SHC1YER096W NUP120P35729 1037 aa7.76□□□□□ -1.17
SHC1YER096W RIM11P38615 370 aa7.76□□□□□ -1.17
SHC1YER096W EFM1P38732 585 aa7.76□□□□□ -1.17
SHC1YER096W MTO1P53070 669 aa7.76□□□□□ -1.17
SHC1YER096W YET2Q04210 160 aa7.76□□□□□ -1.17
SHC1YER096W DIA2Q08496 732 aaPredicted RBP7.76□□□□□ -1.17
SHC1YER096W CLP1Q08685 445 aaPredicted RBP7.76□□□□□ -1.17
SHC1YER096W HIS5P07172 385 aa7.75□□□□□ -1.17
SHC1YER096W PUP3P25451 205 aaKnown RBP7.75□□□□□ -1.17
SHC1YER096W PTC1P35182 281 aa7.75□□□□□ -1.17
SHC1YER096W NEM1P38757 446 aa7.75□□□□□ -1.17
SHC1YER096W PCL5P38794 229 aa7.75□□□□□ -1.17
SHC1YER096W MPT5P39016 859 aaKnown RBP RIP-Chip data7.75□□□□□ -1.17not detected
SHC1YER096W IRR1P40541 1150 aa7.75□□□□□ -1.17
SHC1YER096W IME4P41833 600 aa7.75□□□□□ -1.17
SHC1YER096W STB2P46679 850 aa7.75□□□□□ -1.17
SHC1YER096W COG7P53195 279 aa7.75□□□□□ -1.17
SHC1YER096W IBD2P53892 351 aa7.75□□□□□ -1.17
SHC1YER096W LSM3P57743 89 aaKnown RBP7.75□□□□□ -1.17
SHC1YER096W SPC24Q04477 213 aa7.75□□□□□ -1.17
SHC1YER096W YOL019WQ08157 551 aa7.75□□□□□ -1.17
SHC1YER096W SMF3Q12078 473 aaPredicted RBP7.75□□□□□ -1.17
SHC1YER096W UBA1P22515 1024 aaKnown RBP7.74□□□□□ -1.17
SHC1YER096W VAN1P23642 535 aa7.74□□□□□ -1.17
SHC1YER096W RPH1P39956 796 aa7.74□□□□□ -1.17
SHC1YER096W GCD14P46959 383 aaPredicted RBP7.74□□□□□ -1.17
SHC1YER096W NNF2P53253 936 aa7.74□□□□□ -1.17
SHC1YER096W CLD1P53264 445 aa7.74□□□□□ -1.17
SHC1YER096W YNR061CP53747 219 aa7.74□□□□□ -1.17
SHC1YER096W GTR1Q00582 310 aa7.74□□□□□ -1.17
SHC1YER096W SSL1Q04673 461 aaPredicted RBP7.74□□□□□ -1.17
SHC1YER096W VAM6Q07468 1049 aa7.74□□□□□ -1.17
SHC1YER096W SBP1P10080 294 aaKnown RBP7.73□□□□□ -1.17
SHC1YER096W GUK1P15454 187 aaKnown RBP7.73□□□□□ -1.17
SHC1YER096W PRP6P19735 899 aaPredicted RBP7.73□□□□□ -1.17
SHC1YER096W SPS19P32573 292 aaKnown RBP7.73□□□□□ -1.17
SHC1YER096W SKT5P34226 696 aa7.73□□□□□ -1.17
SHC1YER096W DCW1P36091 449 aa7.73□□□□□ -1.17
SHC1YER096W YHL008CP38750 627 aa7.73□□□□□ -1.17
SHC1YER096W BZZ1P38822 633 aa7.73□□□□□ -1.17
SHC1YER096W NMA2P53204 395 aa7.73□□□□□ -1.17
SHC1YER096W YEH2Q07950 538 aa7.73□□□□□ -1.17
SHC1YER096W ESA1Q08649 445 aa7.73□□□□□ -1.17
SHC1YER096W RPB4P20433 221 aaPredicted RBP7.73□□□□□ -1.17
SHC1YER096W TOA1P32773 286 aa7.73□□□□□ -1.17
SHC1YER096W PRP18P33411 251 aaPredicted RBP7.73□□□□□ -1.17
SHC1YER096W TIP20P33891 701 aa7.73□□□□□ -1.17
SHC1YER096W PTH2P34222 208 aa7.73□□□□□ -1.17
SHC1YER096W STB6P36085 766 aa7.73□□□□□ -1.17
SHC1YER096W TSC10P38342 320 aa7.73□□□□□ -1.17
SHC1YER096W LRP1P38801 184 aaKnown RBP7.73□□□□□ -1.17
SHC1YER096W ECM1P39715 212 aa7.73□□□□□ -1.17
SHC1YER096W SWC4P53201 476 aa7.73□□□□□ -1.17
SHC1YER096W IMP4P53941 290 aaKnown RBP7.73□□□□□ -1.17
SHC1YER096W AQR1P53943 586 aa7.73□□□□□ -1.17
SHC1YER096W SLM2P53955 656 aa7.73□□□□□ -1.17
SHC1YER096W YMR178WQ03219 274 aaKnown RBP7.73□□□□□ -1.17
SHC1YER096W PPN1Q04119 674 aa7.73□□□□□ -1.17
SHC1YER096W CIA1Q05583 330 aa7.73□□□□□ -1.17
SHC1YER096W GPB1Q08886 897 aa7.73□□□□□ -1.17
SHC1YER096W PST1Q12355 444 aa7.73□□□□□ -1.17
SHC1YER096W YBL029C-AQ3E756 94 aa7.73□□□□□ -1.17
SHC1YER096W MPD2Q99316 277 aa7.73□□□□□ -1.17
SHC1YER096W STT4P37297 1900 aa7.72□□□□□ -1.17
SHC1YER096W CAR1P00812 333 aaKnown RBP7.72□□□□□ -1.17
SHC1YER096W NMT1P14743 455 aa7.72□□□□□ -1.17
SHC1YER096W APA1P16550 321 aaKnown RBP7.72□□□□□ -1.17
SHC1YER096W SPR1P32603 445 aa7.72□□□□□ -1.17
SHC1YER096W DBP8P38719 431 aa7.72□□□□□ -1.17
SHC1YER096W YHR045WP38775 560 aa7.72□□□□□ -1.17
SHC1YER096W DHH1P39517 506 aaKnown RBP7.72□□□□□ -1.17
SHC1YER096W OSW5P40219 148 aa7.72□□□□□ -1.17
SHC1YER096W YRB1P41920 201 aaKnown RBP7.72□□□□□ -1.17
SHC1YER096W NBP35P52920 328 aa7.72□□□□□ -1.17
SHC1YER096W CUS2P53830 285 aaPredicted RBP7.72□□□□□ -1.17
SHC1YER096W TDA7P53882 636 aaPredicted RBP7.72□□□□□ -1.17
SHC1YER096W REX2P54964 269 aaKnown RBP7.72□□□□□ -1.17
SHC1YER096W AAT1Q01802 451 aa7.72□□□□□ -1.17
SHC1YER096W LGE1Q02796 332 aaKnown RBP7.72□□□□□ -1.17
SHC1YER096W YML131WQ03102 365 aa7.72□□□□□ -1.17
SHC1YER096W BUD7Q08754 746 aa7.72□□□□□ -1.17
SHC1YER096W GNT1Q12096 491 aa7.72□□□□□ -1.17
SHC1YER096W SUC2P00724 532 aa7.71□□□□□ -1.18
SHC1YER096W CDC21P06785 304 aa7.71□□□□□ -1.18
SHC1YER096W FUM1P08417 488 aaKnown RBP7.71□□□□□ -1.18
SHC1YER096W RFA2P26754 273 aaKnown RBP7.71□□□□□ -1.18
SHC1YER096W CUE2P36075 443 aaKnown RBP7.71□□□□□ -1.18
SHC1YER096W SOL2P37262 315 aa7.71□□□□□ -1.18
SHC1YER096W TAE1P38340 232 aa7.71□□□□□ -1.18
SHC1YER096W YHR020WP38708 688 aaKnown RBP7.71□□□□□ -1.18
SHC1YER096W LSB3P43603 459 aaKnown RBP7.71□□□□□ -1.18
SHC1YER096W ATH1P48016 1211 aa7.71□□□□□ -1.18
SHC1YER096W HST3P53687 447 aa7.71□□□□□ -1.18
SHC1YER096W RSC3Q06639 885 aa7.71□□□□□ -1.18
SHC1YER096W NSE1Q07913 336 aa7.71□□□□□ -1.18
SHC1YER096W YPR202WQ08993 238 aa7.71□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms