RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP4	YDR354W	APL5	Q08951	932 aa	Known RBP	4.72	□□□□□ -1.65
TRP4	YDR354W	YOR019W	Q99248	730 aa		4.72	□□□□□ -1.65
TRP4	YDR354W	VPS15	P22219	1454 aa		4.72	□□□□□ -1.65
TRP4	YDR354W	PDR5	P33302	1511 aa	Known RBP	4.72	□□□□□ -1.65
TRP4	YDR354W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
TRP4	YDR354W	SAC1	P32368	623 aa	Known RBP	4.71	□□□□□ -1.66
TRP4	YDR354W	SWE1	P32944	819 aa		4.71	□□□□□ -1.66
TRP4	YDR354W	PTH2	P34222	208 aa		4.71	□□□□□ -1.66
TRP4	YDR354W	RFC1	P38630	861 aa	Known RBP	4.71	□□□□□ -1.66
TRP4	YDR354W	SAP185	P40856	1058 aa		4.71	□□□□□ -1.66
TRP4	YDR354W	IML2	P47031	731 aa		4.71	□□□□□ -1.66
TRP4	YDR354W	YMR254C	Q04838	102 aa		4.71	□□□□□ -1.66
TRP4	YDR354W	FMP42	Q04991	504 aa		4.71	□□□□□ -1.66
TRP4	YDR354W	GPN2	Q08726	347 aa	Predicted RBP	4.71	□□□□□ -1.66
TRP4	YDR354W	TRM8	Q12009	286 aa		4.71	□□□□□ -1.66
TRP4	YDR354W	YOR093C	Q12275	1648 aa		4.71	□□□□□ -1.66
TRP4	YDR354W	MGR1	P25573	417 aa		4.7	□□□□□ -1.66
TRP4	YDR354W	TEF4	P36008	412 aa	Known RBP	4.7	□□□□□ -1.66
TRP4	YDR354W	YNL181W	P53878	407 aa		4.7	□□□□□ -1.66
TRP4	YDR354W	ARP10	Q04549	284 aa		4.7	□□□□□ -1.66
TRP4	YDR354W	YOL159C	Q08300	171 aa		4.7	□□□□□ -1.66
TRP4	YDR354W	CHC1	P22137	1653 aa	Known RBP	4.7	□□□□□ -1.66
TRP4	YDR354W	NUP159	P40477	1460 aa		4.69	□□□□□ -1.66
TRP4	YDR354W	EDE1	P34216	1381 aa		4.69	□□□□□ -1.66
TRP4	YDR354W	SNF1	P06782	633 aa	Known RBP	4.69	□□□□□ -1.66
TRP4	YDR354W	CLB2	P24869	491 aa		4.69	□□□□□ -1.66
TRP4	YDR354W	PDR3	P33200	976 aa		4.69	□□□□□ -1.66
TRP4	YDR354W	ESL2	P36168	1195 aa		4.69	□□□□□ -1.66
TRP4	YDR354W	EFM2	P38347	419 aa		4.69	□□□□□ -1.66
TRP4	YDR354W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
TRP4	YDR354W	UME6	P39001	836 aa		4.69	□□□□□ -1.66
TRP4	YDR354W	GTR1	Q00582	310 aa		4.69	□□□□□ -1.66
TRP4	YDR354W	MAK10	Q02197	733 aa		4.69	□□□□□ -1.66
TRP4	YDR354W	SMA1	Q02651	245 aa		4.69	□□□□□ -1.66
TRP4	YDR354W	YLR281C	Q05863	155 aa		4.69	□□□□□ -1.66
TRP4	YDR354W	PSK2	Q08217	1101 aa		4.69	□□□□□ -1.66
TRP4	YDR354W	GDB1	Q06625	1536 aa		4.68	□□□□□ -1.66
TRP4	YDR354W	YLR302C	O13544	120 aa		4.68	□□□□□ -1.66
TRP4	YDR354W	CNS1	P33313	385 aa		4.68	□□□□□ -1.66
TRP4	YDR354W	STV1	P37296	890 aa		4.68	□□□□□ -1.66
TRP4	YDR354W	IES5	P40060	125 aa		4.68	□□□□□ -1.66
TRP4	YDR354W	RPN11	P43588	306 aa	Known RBP	4.68	□□□□□ -1.66
TRP4	YDR354W	EKI1	Q03764	534 aa		4.68	□□□□□ -1.66
TRP4	YDR354W	GEA2	P39993	1459 aa	Known RBP	4.68	□□□□□ -1.66
TRP4	YDR354W	DOP1	Q03921	1698 aa		4.67	□□□□□ -1.66
TRP4	YDR354W	HNM1	P19807	563 aa		4.67	□□□□□ -1.66
TRP4	YDR354W	CDC15	P27636	974 aa		4.67	□□□□□ -1.66
TRP4	YDR354W	MRS6	P32864	603 aa	Known RBP	4.67	□□□□□ -1.66
TRP4	YDR354W	YPK3	P38070	525 aa		4.67	□□□□□ -1.66
TRP4	YDR354W	PSY4	P38193	441 aa		4.67	□□□□□ -1.66
TRP4	YDR354W	RKM3	P38222	552 aa		4.67	□□□□□ -1.66
TRP4	YDR354W	RIC1	P40395	1056 aa		4.67	□□□□□ -1.66
TRP4	YDR354W	VPS4	P52917	437 aa		4.67	□□□□□ -1.66
TRP4	YDR354W	NNF2	P53253	936 aa		4.67	□□□□□ -1.66
TRP4	YDR354W	MDG1	P53885	366 aa		4.67	□□□□□ -1.66
TRP4	YDR354W	VID22	Q05934	901 aa		4.67	□□□□□ -1.66
TRP4	YDR354W	BUD3	P25558	1636 aa		4.67	□□□□□ -1.66
TRP4	YDR354W	PDR12	Q02785	1511 aa		4.67	□□□□□ -1.66
TRP4	YDR354W	RPB8	P20436	146 aa		4.66	□□□□□ -1.66
TRP4	YDR354W	SEC24	P40482	926 aa	Known RBP	4.66	□□□□□ -1.66
TRP4	YDR354W	IME4	P41833	600 aa		4.66	□□□□□ -1.66
TRP4	YDR354W	HOS2	P53096	452 aa	Predicted RBP	4.66	□□□□□ -1.66
TRP4	YDR354W	CTL1	Q03220	320 aa	Known RBP	4.66	□□□□□ -1.66
TRP4	YDR354W	ATG16	Q03818	150 aa		4.66	□□□□□ -1.66
TRP4	YDR354W	YDL218W	Q07629	317 aa		4.66	□□□□□ -1.66
TRP4	YDR354W	NUS1	Q12063	375 aa		4.66	□□□□□ -1.66
TRP4	YDR354W	HXK2	P04807	486 aa	Known RBP	4.65	□□□□□ -1.67
TRP4	YDR354W	KRS1	P15180	591 aa	Known RBP	4.65	□□□□□ -1.67
TRP4	YDR354W	PPZ1	P26570	692 aa		4.65	□□□□□ -1.67
TRP4	YDR354W	YIL060W	P40519	144 aa		4.65	□□□□□ -1.67
TRP4	YDR354W	YGL260W	P53056	76 aa		4.65	□□□□□ -1.67
TRP4	YDR354W	IST1	P53843	298 aa	Predicted RBP	4.65	□□□□□ -1.67
TRP4	YDR354W	ATG9	Q12142	997 aa		4.65	□□□□□ -1.67
TRP4	YDR354W	TAH18	Q12181	623 aa		4.65	□□□□□ -1.67
TRP4	YDR354W	GUK1	P15454	187 aa	Known RBP	4.64	□□□□□ -1.67
TRP4	YDR354W	CDC23	P16522	626 aa		4.64	□□□□□ -1.67
TRP4	YDR354W	RAD24	P32641	659 aa		4.64	□□□□□ -1.67
TRP4	YDR354W	BZZ1	P38822	633 aa		4.64	□□□□□ -1.67
TRP4	YDR354W	RTS2	P40962	232 aa		4.64	□□□□□ -1.67
TRP4	YDR354W	YMR317W	Q04893	1140 aa		4.64	□□□□□ -1.67
TRP4	YDR354W	BSC1	Q12140	328 aa		4.64	□□□□□ -1.67
TRP4	YDR354W	MLP1	Q02455	1875 aa	Known RBP	4.64	□□□□□ -1.67
TRP4	YDR354W	CAT8	P39113	1433 aa		4.63	□□□□□ -1.67
TRP4	YDR354W	YBR085C-A	O43137	85 aa		4.63	□□□□□ -1.67
TRP4	YDR354W	RGT1	P32862	1170 aa		4.63	□□□□□ -1.67
TRP4	YDR354W	SLC1	P33333	303 aa		4.63	□□□□□ -1.67
TRP4	YDR354W	RTT107	P38850	1070 aa		4.63	□□□□□ -1.67
TRP4	YDR354W	CCT4	P39078	528 aa	Known RBP	4.63	□□□□□ -1.67
TRP4	YDR354W	PKP1	P40530	394 aa		4.63	□□□□□ -1.67
TRP4	YDR354W	BUD21	Q08492	214 aa	Predicted RBP	4.63	□□□□□ -1.67
TRP4	YDR354W	RPB2	P08518	1224 aa	Known RBP	4.62	□□□□□ -1.67
TRP4	YDR354W	BAR1	P12630	587 aa		4.62	□□□□□ -1.67
TRP4	YDR354W	SEC1	P30619	724 aa	Known RBP	4.62	□□□□□ -1.67
TRP4	YDR354W	MRP20	P32387	263 aa		4.62	□□□□□ -1.67
TRP4	YDR354W	AXL2	P38928	823 aa		4.62	□□□□□ -1.67
TRP4	YDR354W	IAH1	P41734	238 aa		4.62	□□□□□ -1.67
TRP4	YDR354W	FET5	P43561	622 aa		4.62	□□□□□ -1.67
TRP4	YDR354W	ATG27	P46989	271 aa		4.62	□□□□□ -1.67
TRP4	YDR354W	DPB11	P47027	764 aa	Predicted RBP	4.62	□□□□□ -1.67
TRP4	YDR354W	YGR021W	P53212	290 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 119.2 ms