RNA–Protein interactions for RNA: YPR094W

RDS3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene RDS3, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDS3YPR094W PHO90P39535 881 aa0.32□□□□□ -2.36
RDS3YPR094W BUD16P39988 312 aa0.32□□□□□ -2.36
RDS3YPR094W GPP2P40106 250 aaKnown RBP0.32□□□□□ -2.36
RDS3YPR094W YGR210CP42942 411 aa0.32□□□□□ -2.36
RDS3YPR094W SNG1P46950 547 aa0.32□□□□□ -2.36
RDS3YPR094W MSO1P53604 210 aaKnown RBP0.32□□□□□ -2.36
RDS3YPR094W MSS11Q03825 758 aa0.32□□□□□ -2.36
RDS3YPR094W YMR087WQ04299 284 aa0.32□□□□□ -2.36
RDS3YPR094W TRI1Q05024 226 aa0.32□□□□□ -2.36
RDS3YPR094W CDC45Q08032 650 aa0.32□□□□□ -2.36
RDS3YPR094W PDH1Q12428 516 aaKnown RBP0.32□□□□□ -2.36
RDS3YPR094W RVB2Q12464 471 aaKnown RBP0.32□□□□□ -2.36
RDS3YPR094W NOP14Q99207 810 aaKnown RBP0.32□□□□□ -2.36
RDS3YPR094W SRP54P20424 541 aaKnown RBP0.31□□□□□ -2.36
RDS3YPR094W YCR022CP25620 114 aa0.31□□□□□ -2.36
RDS3YPR094W MCM4P30665 933 aaKnown RBP0.31□□□□□ -2.36
RDS3YPR094W ARP1P38696 384 aa0.31□□□□□ -2.36
RDS3YPR094W RRP3P38712 501 aaKnown RBP0.31□□□□□ -2.36
RDS3YPR094W SSP120P39931 234 aaKnown RBP0.31□□□□□ -2.36
RDS3YPR094W AXL1P40851 1208 aa0.31□□□□□ -2.36
RDS3YPR094W TAM41P53230 385 aa0.31□□□□□ -2.36
RDS3YPR094W MOT3P54785 490 aaKnown RBP0.31□□□□□ -2.36
RDS3YPR094W HAL1Q01766 294 aa0.31□□□□□ -2.36
RDS3YPR094W ELP3Q02908 557 aaKnown RBP0.31□□□□□ -2.36
RDS3YPR094W UME1Q03010 460 aa0.31□□□□□ -2.36
RDS3YPR094W VPS64Q03944 604 aa0.31□□□□□ -2.36
RDS3YPR094W GTB1Q04924 702 aa0.31□□□□□ -2.36
RDS3YPR094W ECM38Q05902 660 aaPredicted RBP0.31□□□□□ -2.36
RDS3YPR094W MRPL35Q06678 367 aa0.31□□□□□ -2.36
RDS3YPR094W BAG7Q12128 409 aa0.31□□□□□ -2.36
RDS3YPR094W RFM1Q12192 310 aa0.31□□□□□ -2.36
RDS3YPR094W ERV2Q12284 196 aa0.31□□□□□ -2.36
RDS3YPR094W ADR1P07248 1323 aa0.31□□□□□ -2.36
RDS3YPR094W CCH1P50077 2039 aa0.3□□□□□ -2.36
RDS3YPR094W YML003WP0CF16 290 aa0.3□□□□□ -2.36
RDS3YPR094W RAP1P11938 827 aa0.3□□□□□ -2.36
RDS3YPR094W KRS1P15180 591 aaKnown RBP0.3□□□□□ -2.36
RDS3YPR094W SGF29P25554 259 aa0.3□□□□□ -2.36
RDS3YPR094W MRC1P25588 1096 aa0.3□□□□□ -2.36
RDS3YPR094W SAC6P32599 642 aaKnown RBP0.3□□□□□ -2.36
RDS3YPR094W PAD1P33751 242 aaKnown RBP RIP-Chip data0.3□□□□□ -2.36not detected
RDS3YPR094W YBL059WP34224 193 aa0.3□□□□□ -2.36
RDS3YPR094W YKL097CP34245 136 aa0.3□□□□□ -2.36
RDS3YPR094W PMU1P36069 295 aa0.3□□□□□ -2.36
RDS3YPR094W TUL1P36096 758 aa0.3□□□□□ -2.36
RDS3YPR094W NDT80P38830 627 aa0.3□□□□□ -2.36
RDS3YPR094W SCS2P40075 244 aaKnown RBP0.3□□□□□ -2.36
RDS3YPR094W ARK1P53974 638 aa0.3□□□□□ -2.36
RDS3YPR094W YPS3Q12303 508 aa0.3□□□□□ -2.36
RDS3YPR094W RMP1Q12530 201 aa0.3□□□□□ -2.36
RDS3YPR094W ADH4P10127 382 aa0.29□□□□□ -2.36
RDS3YPR094W COX11P19516 300 aaKnown RBP0.29□□□□□ -2.36
RDS3YPR094W SEC62P21825 274 aa0.29□□□□□ -2.36
RDS3YPR094W RNA14P25298 677 aaKnown RBP0.29□□□□□ -2.36
RDS3YPR094W GAC1P28006 793 aa0.29□□□□□ -2.36
RDS3YPR094W HCS1P34243 683 aa0.29□□□□□ -2.36
RDS3YPR094W ECM15P35195 104 aa0.29□□□□□ -2.36
RDS3YPR094W MID2P36027 376 aa0.29□□□□□ -2.36
RDS3YPR094W NPR2P39923 615 aa0.29□□□□□ -2.36
RDS3YPR094W YTA12P40341 825 aa0.29□□□□□ -2.36
RDS3YPR094W DJP1P40564 432 aa0.29□□□□□ -2.36
RDS3YPR094W IMA5P40884 581 aa0.29□□□□□ -2.36
RDS3YPR094W CTK2P46962 323 aa0.29□□□□□ -2.36
RDS3YPR094W SHY1P53266 389 aa0.29□□□□□ -2.36
RDS3YPR094W SOL4P53315 255 aa0.29□□□□□ -2.36
RDS3YPR094W YNR029CP53729 429 aaKnown RBP0.29□□□□□ -2.36
RDS3YPR094W SWA2Q06677 668 aa0.29□□□□□ -2.36
RDS3YPR094W CRD1Q07560 283 aa0.29□□□□□ -2.36
RDS3YPR094W THI20Q08224 551 aa0.29□□□□□ -2.36
RDS3YPR094W ARP6Q12509 438 aa0.29□□□□□ -2.36
RDS3YPR094W YBL111CQ3E7Y5 667 aa0.29□□□□□ -2.36
RDS3YPR094W VAS1P07806 1104 aaKnown RBP0.28□□□□□ -2.36
RDS3YPR094W ATR1P13090 542 aa0.28□□□□□ -2.36
RDS3YPR094W TYR1P20049 452 aa0.28□□□□□ -2.36
RDS3YPR094W RVS161P25343 265 aaKnown RBP0.28□□□□□ -2.36
RDS3YPR094W HEM12P32347 362 aaPredicted RBP0.28□□□□□ -2.36
RDS3YPR094W PAH1P32567 862 aa0.28□□□□□ -2.36
RDS3YPR094W VPS17P32913 551 aa0.28□□□□□ -2.36
RDS3YPR094W TGL1P34163 548 aa0.28□□□□□ -2.36
RDS3YPR094W OCA5P38738 679 aa0.28□□□□□ -2.36
RDS3YPR094W VPS52P39904 641 aa0.28□□□□□ -2.36
RDS3YPR094W YIL067CP40514 678 aa0.28□□□□□ -2.36
RDS3YPR094W SPC105P53148 917 aa0.28□□□□□ -2.36
RDS3YPR094W HOL1P53389 586 aa0.28□□□□□ -2.36
RDS3YPR094W SAM50P53969 484 aa0.28□□□□□ -2.36
RDS3YPR094W RLI1Q03195 608 aaKnown RBP0.28□□□□□ -2.36
RDS3YPR094W CIA1Q05583 330 aa0.28□□□□□ -2.36
RDS3YPR094W PBA1Q05778 276 aa0.28□□□□□ -2.36
RDS3YPR094W ADE13Q05911 482 aaKnown RBP0.28□□□□□ -2.36
RDS3YPR094W DIC1Q06143 298 aa0.28□□□□□ -2.36
RDS3YPR094W ENT4Q07872 247 aa0.28□□□□□ -2.36
RDS3YPR094W RDR1Q08904 546 aa0.28□□□□□ -2.36
RDS3YPR094W PSF3Q12146 194 aa0.28□□□□□ -2.36
RDS3YPR094W SUL2Q12325 893 aa0.28□□□□□ -2.36
RDS3YPR094W HHF1P02309 103 aaKnown RBP0.27□□□□□ -2.37
RDS3YPR094W SUP35P05453 685 aaKnown RBP0.27□□□□□ -2.37
RDS3YPR094W HSP26P15992 214 aaKnown RBP RIP-Chip data0.27□□□□□ -2.37not detected
RDS3YPR094W CDC60P26637 1090 aaKnown RBP0.27□□□□□ -2.37
RDS3YPR094W CBF2P32504 956 aa0.27□□□□□ -2.37
RDS3YPR094W FRD1P32614 470 aaKnown RBP0.27□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 71.8 ms