RNA–Protein interactions for RNA: YOR260W

GCD1, Transcript of Gamma subunit of the translation initiation factor eIF2B, yeast

Gene GCD1, Length 1,737 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCD1	YOR260W	ERG20	P08524	352 aa	Known RBP	4.12	□□□□□ -1.75
GCD1	YOR260W	COX11	P19516	300 aa	Known RBP	4.12	□□□□□ -1.75
GCD1	YOR260W	STE50	P25344	346 aa		4.12	□□□□□ -1.75
GCD1	YOR260W	SPB1	P25582	841 aa	Predicted RBP	4.12	□□□□□ -1.75
GCD1	YOR260W	SSE1	P32589	693 aa	Known RBP	4.12	□□□□□ -1.75
GCD1	YOR260W	MRP4	P32902	394 aa		4.12	□□□□□ -1.75
GCD1	YOR260W	GMH1	P36125	273 aa		4.12	□□□□□ -1.75
GCD1	YOR260W	COS111	P38308	924 aa		4.12	□□□□□ -1.75
GCD1	YOR260W	GDI1	P39958	451 aa	Known RBP	4.12	□□□□□ -1.75
GCD1	YOR260W	VID28	P40547	921 aa		4.12	□□□□□ -1.75
GCD1	YOR260W	SAP4	P53036	818 aa		4.12	□□□□□ -1.75
GCD1	YOR260W	SGF73	P53165	657 aa		4.12	□□□□□ -1.75
GCD1	YOR260W	YGR151C	P53287	111 aa		4.12	□□□□□ -1.75
GCD1	YOR260W	OAZ1	Q02803	292 aa		4.12	□□□□□ -1.75
GCD1	YOR260W	KAP95	Q06142	861 aa	Known RBP	4.12	□□□□□ -1.75
GCD1	YOR260W	TRM8	Q12009	286 aa		4.12	□□□□□ -1.75
GCD1	YOR260W	MDY2	Q12285	212 aa		4.12	□□□□□ -1.75
GCD1	YOR260W	RMP1	Q12530	201 aa		4.12	□□□□□ -1.75
GCD1	YOR260W	YNL162W-A	Q3E7A8	72 aa		4.12	□□□□□ -1.75
GCD1	YOR260W	BRR1	Q99177	341 aa	Predicted RBP	4.12	□□□□□ -1.75
GCD1	YOR260W	APM4	Q99186	491 aa		4.12	□□□□□ -1.75
GCD1	YOR260W	YOR019W	Q99248	730 aa		4.12	□□□□□ -1.75
GCD1	YOR260W	SSK22	P25390	1331 aa	Predicted RBP	4.11	□□□□□ -1.75
GCD1	YOR260W	ARG81	P05085	880 aa		4.11	□□□□□ -1.75
GCD1	YOR260W	ARG3	P05150	338 aa		4.11	□□□□□ -1.75
GCD1	YOR260W	ADK2	P26364	225 aa		4.11	□□□□□ -1.75
GCD1	YOR260W	HMX1	P32339	317 aa		4.11	□□□□□ -1.75
GCD1	YOR260W	PTR2	P32901	601 aa		4.11	□□□□□ -1.75
GCD1	YOR260W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
GCD1	YOR260W	LOT5	P34234	306 aa		4.11	□□□□□ -1.75
GCD1	YOR260W	KSP1	P38691	1029 aa	Known RBP	4.11	□□□□□ -1.75
GCD1	YOR260W	PIH1	P38768	344 aa		4.11	□□□□□ -1.75
GCD1	YOR260W	MRX1	P40050	688 aa		4.11	□□□□□ -1.75
GCD1	YOR260W	MPS3	P47069	682 aa		4.11	□□□□□ -1.75
GCD1	YOR260W	CPR6	P53691	371 aa	Known RBP	4.11	□□□□□ -1.75
GCD1	YOR260W	GIM3	P53900	129 aa		4.11	□□□□□ -1.75
GCD1	YOR260W	YML119W	Q03208	357 aa		4.11	□□□□□ -1.75
GCD1	YOR260W	RMT2	Q03305	412 aa		4.11	□□□□□ -1.75
GCD1	YOR260W	HLR1	Q04429	423 aa		4.11	□□□□□ -1.75
GCD1	YOR260W	VBA4	Q04602	768 aa	Known RBP	4.11	□□□□□ -1.75
GCD1	YOR260W	GTB1	Q04924	702 aa		4.11	□□□□□ -1.75
GCD1	YOR260W	RSF1	Q05043	376 aa		4.11	□□□□□ -1.75
GCD1	YOR260W	VID22	Q05934	901 aa		4.11	□□□□□ -1.75
GCD1	YOR260W	ECM7	Q06200	448 aa		4.11	□□□□□ -1.75
GCD1	YOR260W	ATG26	Q06321	1198 aa		4.11	□□□□□ -1.75
GCD1	YOR260W	YFT2	Q06676	274 aa		4.11	□□□□□ -1.75
GCD1	YOR260W	ARG80	P07249	177 aa		4.1	□□□□□ -1.75
GCD1	YOR260W	ABF1	P14164	731 aa		4.1	□□□□□ -1.75
GCD1	YOR260W	NCP1	P16603	691 aa	Known RBP	4.1	□□□□□ -1.75
GCD1	YOR260W	CWH43	P25618	953 aa		4.1	□□□□□ -1.75
GCD1	YOR260W	URA7	P28274	579 aa	Known RBP	4.1	□□□□□ -1.75
GCD1	YOR260W	SRB4	P32569	687 aa		4.1	□□□□□ -1.75
GCD1	YOR260W	YUH1	P35127	236 aa		4.1	□□□□□ -1.75
GCD1	YOR260W	YKL023W	P36103	277 aa	Known RBP	4.1	□□□□□ -1.75
GCD1	YOR260W	MMS4	P38257	691 aa		4.1	□□□□□ -1.75
GCD1	YOR260W	MSG5	P38590	489 aa		4.1	□□□□□ -1.75
GCD1	YOR260W	MUP3	P38734	546 aa		4.1	□□□□□ -1.75
GCD1	YOR260W	CIK1	Q01649	594 aa		4.1	□□□□□ -1.75
GCD1	YOR260W	ADA2	Q02336	434 aa		4.1	□□□□□ -1.75
GCD1	YOR260W	TIM50	Q02776	476 aa		4.1	□□□□□ -1.75
GCD1	YOR260W	ECM18	Q04623	453 aa		4.1	□□□□□ -1.75
GCD1	YOR260W	DON1	Q05610	365 aa		4.1	□□□□□ -1.75
GCD1	YOR260W	PML1	Q07930	204 aa	Predicted RBP	4.1	□□□□□ -1.75
GCD1	YOR260W	ARP7	Q12406	477 aa		4.1	□□□□□ -1.75
GCD1	YOR260W	ISA2	Q12425	185 aa		4.1	□□□□□ -1.75
GCD1	YOR260W	RTN2	Q12443	393 aa		4.1	□□□□□ -1.75
GCD1	YOR260W	VPS15	P22219	1454 aa		4.1	□□□□□ -1.75
GCD1	YOR260W	JIP3	O13555	125 aa		4.09	□□□□□ -1.75
GCD1	YOR260W	RPS9B	P05755	195 aa	Known RBP	4.09	□□□□□ -1.75
GCD1	YOR260W	PRB1	P09232	635 aa		4.09	□□□□□ -1.75
GCD1	YOR260W	MTF2	P10849	440 aa		4.09	□□□□□ -1.75
GCD1	YOR260W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
GCD1	YOR260W	SGF29	P25554	259 aa		4.09	□□□□□ -1.75
GCD1	YOR260W	MGM1	P32266	881 aa		4.09	□□□□□ -1.75
GCD1	YOR260W	MGM101	P32787	269 aa	Known RBP	4.09	□□□□□ -1.75
GCD1	YOR260W	SLC1	P33333	303 aa		4.09	□□□□□ -1.75
GCD1	YOR260W	ADH5	P38113	351 aa	Known RBP	4.09	□□□□□ -1.75
GCD1	YOR260W	CDS1	P38221	457 aa		4.09	□□□□□ -1.75
GCD1	YOR260W	MSR1	P38714	643 aa		4.09	□□□□□ -1.75
GCD1	YOR260W	MTG2	P38860	518 aa		4.09	□□□□□ -1.75
GCD1	YOR260W	DSD1	P53095	428 aa		4.09	□□□□□ -1.75
GCD1	YOR260W	LSC1	P53598	329 aa	Known RBP	4.09	□□□□□ -1.75
GCD1	YOR260W	TEP1	P53916	434 aa		4.09	□□□□□ -1.75
GCD1	YOR260W	ARP5	P53946	755 aa		4.09	□□□□□ -1.75
GCD1	YOR260W	AIM32	Q04689	311 aa		4.09	□□□□□ -1.75
GCD1	YOR260W	YDL086W	Q07505	273 aa		4.09	□□□□□ -1.75
GCD1	YOR260W	PEX15	Q08215	383 aa		4.09	□□□□□ -1.75
GCD1	YOR260W	SPE3	Q12074	293 aa	Known RBP	4.09	□□□□□ -1.75
GCD1	YOR260W	YOL159C-A	Q3E769	90 aa		4.09	□□□□□ -1.75
GCD1	YOR260W	NTE1	Q04958	1679 aa		4.09	□□□□□ -1.75
GCD1	YOR260W	CAR2	P07991	424 aa	Known RBP	4.09	□□□□□ -1.76
GCD1	YOR260W	KIN82	P25341	720 aa		4.09	□□□□□ -1.76
GCD1	YOR260W	PRE4	P30657	266 aa		4.09	□□□□□ -1.76
GCD1	YOR260W	CTP1	P38152	299 aa		4.09	□□□□□ -1.76
GCD1	YOR260W	YSW1	P38280	609 aa		4.09	□□□□□ -1.76
GCD1	YOR260W	NTC20	P38302	140 aa	Predicted RBP	4.09	□□□□□ -1.76
GCD1	YOR260W	SLX1	P38324	304 aa		4.09	□□□□□ -1.76
GCD1	YOR260W	RFC3	P38629	340 aa		4.09	□□□□□ -1.76
GCD1	YOR260W	YHB1	P39676	399 aa	Known RBP	4.09	□□□□□ -1.76
GCD1	YOR260W	PAC2	P39937	518 aa		4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms