RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C HSP82P02829 709 aaKnown RBP2.43□□□□□ -2.02
VTI1YMR197C YML002WP0CF17 737 aa2.43□□□□□ -2.02
VTI1YMR197C CMK1P27466 446 aaKnown RBP2.43□□□□□ -2.02
VTI1YMR197C PAH1P32567 862 aa2.43□□□□□ -2.02
VTI1YMR197C VMA8P32610 256 aaKnown RBP2.43□□□□□ -2.02
VTI1YMR197C MUD2P36084 527 aaKnown RBP2.43□□□□□ -2.02
VTI1YMR197C APM3P38153 483 aa2.43□□□□□ -2.02
VTI1YMR197C LEU5P38702 357 aa2.43□□□□□ -2.02
VTI1YMR197C APE4P38821 490 aa2.43□□□□□ -2.02
VTI1YMR197C YEL068CP39977 110 aa2.43□□□□□ -2.02
VTI1YMR197C RBG2P53295 368 aaKnown RBP2.43□□□□□ -2.02
VTI1YMR197C ADE16P54113 591 aaKnown RBP2.43□□□□□ -2.02
VTI1YMR197C MRPL13Q02204 264 aa2.43□□□□□ -2.02
VTI1YMR197C YPL108WQ02872 168 aaPredicted RBP2.43□□□□□ -2.02
VTI1YMR197C YLR287CQ05881 355 aa2.43□□□□□ -2.02
VTI1YMR197C YLR455WQ06188 304 aa2.43□□□□□ -2.02
VTI1YMR197C IMH1Q06704 911 aaKnown RBP2.43□□□□□ -2.02
VTI1YMR197C PSK2Q08217 1101 aa2.43□□□□□ -2.02
VTI1YMR197C YLR049CQ12110 428 aa2.43□□□□□ -2.02
VTI1YMR197C HSH49Q99181 213 aaPredicted RBP2.43□□□□□ -2.02
VTI1YMR197C NUC1P08466 329 aa2.42□□□□□ -2.02
VTI1YMR197C MTF2P10849 440 aa2.42□□□□□ -2.02
VTI1YMR197C PMS1P14242 873 aa2.42□□□□□ -2.02
VTI1YMR197C PRP16P15938 1071 aaPredicted RBP2.42□□□□□ -2.02
VTI1YMR197C AAC3P18238 307 aa2.42□□□□□ -2.02
VTI1YMR197C YCL049CP25577 312 aa2.42□□□□□ -2.02
VTI1YMR197C URK1P27515 501 aa2.42□□□□□ -2.02
VTI1YMR197C NOP4P37838 685 aaKnown RBP2.42□□□□□ -2.02
VTI1YMR197C SPC72P39723 622 aa2.42□□□□□ -2.02
VTI1YMR197C GPD2P41911 440 aaKnown RBP2.42□□□□□ -2.02
VTI1YMR197C ATG27P46989 271 aa2.42□□□□□ -2.02
VTI1YMR197C UPF3P48412 387 aaKnown RBP2.42□□□□□ -2.02
VTI1YMR197C MSY1P48527 492 aa2.42□□□□□ -2.02
VTI1YMR197C TAM41P53230 385 aa2.42□□□□□ -2.02
VTI1YMR197C ARC35P53731 342 aaKnown RBP2.42□□□□□ -2.02
VTI1YMR197C YNL234WP53857 426 aa2.42□□□□□ -2.02
VTI1YMR197C MRPL19P53875 158 aa2.42□□□□□ -2.02
VTI1YMR197C SMA1Q02651 245 aa2.42□□□□□ -2.02
VTI1YMR197C GTB1Q04924 702 aa2.42□□□□□ -2.02
VTI1YMR197C UTP21Q06078 939 aaPredicted RBP2.42□□□□□ -2.02
VTI1YMR197C SPT7P35177 1332 aa2.42□□□□□ -2.02
VTI1YMR197C SEM1O94742 89 aa2.41□□□□□ -2.02
VTI1YMR197C SNF1P06782 633 aaKnown RBP2.41□□□□□ -2.02
VTI1YMR197C BAR1P12630 587 aa2.41□□□□□ -2.02
VTI1YMR197C PCT1P13259 424 aa2.41□□□□□ -2.02
VTI1YMR197C DAL5P15365 543 aa2.41□□□□□ -2.02
VTI1YMR197C RAD16P31244 790 aa2.41□□□□□ -2.02
VTI1YMR197C VPH1P32563 840 aaKnown RBP2.41□□□□□ -2.02
VTI1YMR197C FRD1P32614 470 aaKnown RBP2.41□□□□□ -2.02
VTI1YMR197C ANP1P32629 500 aa2.41□□□□□ -2.02
VTI1YMR197C MRPL36P36531 177 aa2.41□□□□□ -2.02
VTI1YMR197C SRP72P38688 640 aaKnown RBP2.41□□□□□ -2.02
VTI1YMR197C UME6P39001 836 aa2.41□□□□□ -2.02
VTI1YMR197C PHM8P40025 321 aa2.41□□□□□ -2.02
VTI1YMR197C PSF2P40359 213 aa2.41□□□□□ -2.02
VTI1YMR197C RIC1P40395 1056 aa2.41□□□□□ -2.02
VTI1YMR197C CAB2P40506 365 aa2.41□□□□□ -2.02
VTI1YMR197C ROK1P45818 564 aaPredicted RBP2.41□□□□□ -2.02
VTI1YMR197C RPS0BP46654 252 aaKnown RBP2.41□□□□□ -2.02
VTI1YMR197C MAD3P47074 515 aa2.41□□□□□ -2.02
VTI1YMR197C CBK1P53894 756 aa2.41□□□□□ -2.02
VTI1YMR197C SYF1Q04048 859 aaPredicted RBP2.41□□□□□ -2.02
VTI1YMR197C YKU80Q04437 629 aa2.41□□□□□ -2.02
VTI1YMR197C VID22Q05934 901 aa2.41□□□□□ -2.02
VTI1YMR197C RSA1Q08932 381 aa2.41□□□□□ -2.02
VTI1YMR197C RRG1Q12167 365 aaPredicted RBP2.41□□□□□ -2.02
VTI1YMR197C FUM1P08417 488 aaKnown RBP2.4□□□□□ -2.03
VTI1YMR197C MIS1P09440 975 aaKnown RBP2.4□□□□□ -2.03
VTI1YMR197C GUK1P15454 187 aaKnown RBP2.4□□□□□ -2.03
VTI1YMR197C MET8P15807 274 aa2.4□□□□□ -2.03
VTI1YMR197C PFK2P16862 959 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
VTI1YMR197C UBC1P21734 215 aaKnown RBP2.4□□□□□ -2.03
VTI1YMR197C CLB4P24871 460 aa2.4□□□□□ -2.03
VTI1YMR197C RFA2P26754 273 aaKnown RBP2.4□□□□□ -2.03
VTI1YMR197C DBF4P32325 704 aa2.4□□□□□ -2.03
VTI1YMR197C RPN2P32565 945 aaKnown RBP2.4□□□□□ -2.03
VTI1YMR197C TRS65P32893 560 aa2.4□□□□□ -2.03
VTI1YMR197C PDR3P33200 976 aa2.4□□□□□ -2.03
VTI1YMR197C SAS3P34218 831 aa2.4□□□□□ -2.03
VTI1YMR197C AXL2P38928 823 aa2.4□□□□□ -2.03
VTI1YMR197C KRE9P39005 276 aa2.4□□□□□ -2.03
VTI1YMR197C CAJ1P39101 391 aa2.4□□□□□ -2.03
VTI1YMR197C YER010CP40011 234 aa2.4□□□□□ -2.03
VTI1YMR197C PUG1P40100 303 aa2.4□□□□□ -2.03
VTI1YMR197C DPH1P40487 425 aaKnown RBP2.4□□□□□ -2.03
VTI1YMR197C IRC6P43615 237 aa2.4□□□□□ -2.03
VTI1YMR197C YML6P51998 286 aa2.4□□□□□ -2.03
VTI1YMR197C CPR6P53691 371 aaKnown RBP2.4□□□□□ -2.03
VTI1YMR197C ASI1P54074 624 aa2.4□□□□□ -2.03
VTI1YMR197C TIM10P87108 93 aa2.4□□□□□ -2.03
VTI1YMR197C FCP1Q03254 732 aa2.4□□□□□ -2.03
VTI1YMR197C YDR415CQ04033 374 aaPredicted RBP2.4□□□□□ -2.03
VTI1YMR197C TAF11Q04226 346 aa2.4□□□□□ -2.03
VTI1YMR197C SMA2Q04658 369 aa2.4□□□□□ -2.03
VTI1YMR197C MCP2Q06567 569 aa2.4□□□□□ -2.03
VTI1YMR197C CSR1Q06705 408 aaKnown RBP2.4□□□□□ -2.03
VTI1YMR197C BAG7Q12128 409 aa2.4□□□□□ -2.03
VTI1YMR197C BSC1Q12140 328 aa2.4□□□□□ -2.03
VTI1YMR197C SMC6Q12749 1114 aa2.4□□□□□ -2.03
VTI1YMR197C CYB2P00175 591 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms