RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEN1	YLR430W	SPC34	P36131	295 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	IPI1	P38803	334 aa	Predicted RBP	4.2	□□□□□ -1.74
SEN1	YLR430W	FMP10	P40098	244 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	TGL3	P40308	642 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	RPE1	P46969	238 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	TIM54	P47045	478 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	NIT3	P49954	291 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	SLD3	P53135	668 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	SVL3	Q03088	825 aa	Known RBP	4.2	□□□□□ -1.74
SEN1	YLR430W	IMA2	Q08295	589 aa		4.2	□□□□□ -1.74
SEN1	YLR430W	TPK3	P05986	398 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	SAN1	P22470	610 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	NAM9	P27929	486 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	VMA5	P31412	392 aa	Known RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	THI4	P32318	326 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	CYS4	P32582	507 aa	Known RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	FMP23	P38231	175 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	NOP16	P40007	231 aa	Known RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	RET2	P43621	546 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	YGL036W	P53185	909 aa	Predicted RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	HHO1	P53551	258 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	RPN5	Q12250	445 aa	Known RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	MET6	P05694	767 aa	Known RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	PFK1	P16861	987 aa	Known RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	CTR86	P25355	563 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	LYP1	P32487	611 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	YPT52	P36018	234 aa	Known RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	VHC1	P38329	1120 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	EGD2	P38879	174 aa	Known RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	RSP5	P39940	809 aa	Known RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	YJR061W	P40355	935 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	ORC5	P50874	479 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	COG1	P53079	417 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	YPR1	Q12458	312 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	YBR085C-A	O43137	85 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	TUF1	P02992	437 aa	Known RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	LAT1	P12695	482 aa	Known RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	HOM2	P13663	365 aa	Known RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	SAS4	Q04003	481 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	HDA3	Q06623	655 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	YOL075C	Q08234	1294 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	RRP5	Q05022	1729 aa	Known RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	MOD5	P07884	428 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	GIT1	P25346	518 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	GLY1	P37303	387 aa	Known RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	IRC8	P47046	822 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	NOG2	P53742	486 aa	Known RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	NAN1	Q02931	896 aa	Known RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	UBX5	Q06682	500 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	PET54	P10834	293 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	DAL80	P26343	269 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	SAC1	P32368	623 aa	Known RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	TOM20	P35180	183 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	ELF1	P36053	145 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	ECM13	P38195	257 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	PCA1	P38360	1216 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	SRP72	P38688	640 aa	Known RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	KRE29	P40026	464 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	YIL055C	P40523	627 aa	Known RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	HOC1	P47124	396 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	SNX41	Q04053	625 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	ULA1	Q12059	462 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	GRX2	P17695	143 aa	Known RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	PPQ1	P32945	549 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	SEA4	P38164	1038 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	LEU5	P38702	357 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	ORC6	P38826	435 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	SPF1	P39986	1215 aa	Known RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	LSB6	P42951	607 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	YJR030C	P47101	745 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	SOK2	P53438	785 aa	Predicted RBP	4.19	□□□□□ -1.74
SEN1	YLR430W	ARL3	Q02804	198 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	IVY1	Q04934	453 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	YEH1	Q07804	573 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	DGK1	Q12382	290 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	STB3	Q12427	513 aa		4.19	□□□□□ -1.74
SEN1	YLR430W	FOB1	O13329	566 aa		4.18	□□□□□ -1.74
SEN1	YLR430W	TPK2	P06245	380 aa		4.18	□□□□□ -1.74
SEN1	YLR430W	CDC23	P16522	626 aa		4.18	□□□□□ -1.74
SEN1	YLR430W	RSC6	P25632	483 aa		4.18	□□□□□ -1.74
SEN1	YLR430W	YKL023W	P36103	277 aa	Known RBP	4.18	□□□□□ -1.74
SEN1	YLR430W	MLH1	P38920	769 aa		4.18	□□□□□ -1.74
SEN1	YLR430W	STT3	P39007	718 aa	Known RBP	4.18	□□□□□ -1.74
SEN1	YLR430W	TOM22	P49334	152 aa		4.18	□□□□□ -1.74
SEN1	YLR430W	PMT5	P52867	743 aa		4.18	□□□□□ -1.74
SEN1	YLR430W	UFO1	Q04511	668 aa		4.18	□□□□□ -1.74
SEN1	YLR430W	ACM1	Q08981	209 aa		4.18	□□□□□ -1.74
SEN1	YLR430W	NUP192	P47054	1683 aa		4.18	□□□□□ -1.74
SEN1	YLR430W	PCK1	P10963	549 aa		4.18	□□□□□ -1.74
SEN1	YLR430W	SKG1	P36169	355 aa		4.18	□□□□□ -1.74
SEN1	YLR430W	RRT2	P38332	387 aa		4.18	□□□□□ -1.74
SEN1	YLR430W	GUF1	P46943	645 aa		4.18	□□□□□ -1.74
SEN1	YLR430W	AIM23	P47015	356 aa		4.18	□□□□□ -1.74
SEN1	YLR430W	ARO10	Q06408	635 aa		4.18	□□□□□ -1.74
SEN1	YLR430W	CUE5	Q08412	411 aa	Known RBP	4.18	□□□□□ -1.74
SEN1	YLR430W	SYC1	Q08553	188 aa	Predicted RBP	4.18	□□□□□ -1.74
SEN1	YLR430W	GRX6	Q12438	231 aa		4.18	□□□□□ -1.74
SEN1	YLR430W	BCY1	P07278	416 aa	Known RBP	4.18	□□□□□ -1.74
SEN1	YLR430W	PRP28	P23394	588 aa		4.18	□□□□□ -1.74
SEN1	YLR430W	GPI10	P30777	616 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms