RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeast

Gene RPN13, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN13	YLR421C	MPP10	P47083	593 aa	Known RBP	3.57	□□□□□ -1.84
RPN13	YLR421C	CTF18	P49956	741 aa		3.57	□□□□□ -1.84
RPN13	YLR421C	AAT1	Q01802	451 aa		3.57	□□□□□ -1.84
RPN13	YLR421C	SPC19	Q03954	165 aa		3.57	□□□□□ -1.84
RPN13	YLR421C	VIP1	Q06685	1146 aa	Known RBP	3.57	□□□□□ -1.84
RPN13	YLR421C	DSE3	Q08729	430 aa		3.57	□□□□□ -1.84
RPN13	YLR421C	GET3	Q12154	354 aa	Known RBP	3.57	□□□□□ -1.84
RPN13	YLR421C	SCM3	Q12334	223 aa		3.57	□□□□□ -1.84
RPN13	YLR421C	YOR111W	Q99210	232 aa		3.57	□□□□□ -1.84
RPN13	YLR421C	CHC1	P22137	1653 aa	Known RBP	3.56	□□□□□ -1.84
RPN13	YLR421C	NTE1	Q04958	1679 aa		3.56	□□□□□ -1.84
RPN13	YLR421C	IML1	P47170	1584 aa		3.56	□□□□□ -1.84
RPN13	YLR421C	RAD9	P14737	1309 aa		3.56	□□□□□ -1.84
RPN13	YLR421C	VAS1	P07806	1104 aa	Known RBP	3.56	□□□□□ -1.84
RPN13	YLR421C	MRP7	P12687	371 aa		3.56	□□□□□ -1.84
RPN13	YLR421C	SIR1	P21691	654 aa		3.56	□□□□□ -1.84
RPN13	YLR421C	MCM3	P24279	971 aa	Known RBP	3.56	□□□□□ -1.84
RPN13	YLR421C	LTV1	P34078	463 aa		3.56	□□□□□ -1.84
RPN13	YLR421C	BLI1	P35727	113 aa		3.56	□□□□□ -1.84
RPN13	YLR421C	TAF5	P38129	798 aa		3.56	□□□□□ -1.84
RPN13	YLR421C	NPR3	P38742	1146 aa		3.56	□□□□□ -1.84
RPN13	YLR421C	AXL2	P38928	823 aa		3.56	□□□□□ -1.84
RPN13	YLR421C	DPH1	P40487	425 aa	Known RBP	3.56	□□□□□ -1.84
RPN13	YLR421C	DSN1	P40568	576 aa		3.56	□□□□□ -1.84
RPN13	YLR421C	SMK1	P41808	388 aa		3.56	□□□□□ -1.84
RPN13	YLR421C	IRC6	P43615	237 aa		3.56	□□□□□ -1.84
RPN13	YLR421C	VPS4	P52917	437 aa		3.56	□□□□□ -1.84
RPN13	YLR421C	MRPL13	Q02204	264 aa		3.56	□□□□□ -1.84
RPN13	YLR421C	VPS60	Q03390	229 aa		3.56	□□□□□ -1.84
RPN13	YLR421C	ARA2	Q04212	335 aa		3.56	□□□□□ -1.84
RPN13	YLR421C	YMR018W	Q04364	514 aa		3.56	□□□□□ -1.84
RPN13	YLR421C	YMR034C	Q05131	434 aa	Predicted RBP	3.56	□□□□□ -1.84
RPN13	YLR421C	VID22	Q05934	901 aa		3.56	□□□□□ -1.84
RPN13	YLR421C	YDL242W	Q07746	117 aa		3.56	□□□□□ -1.84
RPN13	YLR421C	HOS1	Q12214	470 aa		3.56	□□□□□ -1.84
RPN13	YLR421C	YSP2	Q06681	1438 aa		3.55	□□□□□ -1.84
RPN13	YLR421C	YRF1-4	O13559	1382 aa		3.55	□□□□□ -1.84
RPN13	YLR421C	YML133C	Q03099	1374 aa		3.55	□□□□□ -1.84
RPN13	YLR421C	YLL067C	Q07888	1374 aa		3.55	□□□□□ -1.84
RPN13	YLR421C	YLL066C	Q99208	1374 aa		3.55	□□□□□ -1.84
RPN13	YLR421C	SNF1	P06782	633 aa	Known RBP	3.55	□□□□□ -1.84
RPN13	YLR421C	SAN1	P22470	610 aa		3.55	□□□□□ -1.84
RPN13	YLR421C	PRP45	P28004	379 aa	Predicted RBP	3.55	□□□□□ -1.84
RPN13	YLR421C	NUP120	P35729	1037 aa		3.55	□□□□□ -1.84
RPN13	YLR421C	MUD2	P36084	527 aa	Known RBP	3.55	□□□□□ -1.84
RPN13	YLR421C	BYE1	P36106	594 aa		3.55	□□□□□ -1.84
RPN13	YLR421C	YBR138C	P38277	524 aa		3.55	□□□□□ -1.84
RPN13	YLR421C	ARC40	P38328	384 aa	Known RBP	3.55	□□□□□ -1.84
RPN13	YLR421C	ARO9	P38840	513 aa	Predicted RBP	3.55	□□□□□ -1.84
RPN13	YLR421C	LNP1	P38878	278 aa		3.55	□□□□□ -1.84
RPN13	YLR421C	FAF1	P40546	346 aa	Predicted RBP	3.55	□□□□□ -1.84
RPN13	YLR421C	TES1	P41903	349 aa	Known RBP	3.55	□□□□□ -1.84
RPN13	YLR421C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	3.55	□□□□□ -1.84	not detected
RPN13	YLR421C	IDS2	P46958	469 aa		3.55	□□□□□ -1.84
RPN13	YLR421C	IMA1	P53051	589 aa		3.55	□□□□□ -1.84
RPN13	YLR421C	RRT6	P53117	311 aa	Predicted RBP	3.55	□□□□□ -1.84
RPN13	YLR421C	YNR071C	P53757	342 aa		3.55	□□□□□ -1.84
RPN13	YLR421C	NRT1	Q08485	598 aa		3.55	□□□□□ -1.84
RPN13	YLR421C	NUP192	P47054	1683 aa		3.55	□□□□□ -1.84
RPN13	YLR421C	BUD3	P25558	1636 aa		3.55	□□□□□ -1.84
RPN13	YLR421C	DRS2	P39524	1355 aa		3.54	□□□□□ -1.84
RPN13	YLR421C	HSP82	P02829	709 aa	Known RBP	3.54	□□□□□ -1.84
RPN13	YLR421C	DAL5	P15365	543 aa		3.54	□□□□□ -1.84
RPN13	YLR421C	MET8	P15807	274 aa		3.54	□□□□□ -1.84
RPN13	YLR421C	CMK1	P27466	446 aa	Known RBP	3.54	□□□□□ -1.84
RPN13	YLR421C	SLC1	P33333	303 aa		3.54	□□□□□ -1.84
RPN13	YLR421C	TOM71	P38825	639 aa	Known RBP	3.54	□□□□□ -1.84
RPN13	YLR421C	VTC2	P43585	828 aa		3.54	□□□□□ -1.84
RPN13	YLR421C	YPT11	P48559	417 aa		3.54	□□□□□ -1.84
RPN13	YLR421C	PRP3	Q03338	469 aa	Predicted RBP	3.54	□□□□□ -1.84
RPN13	YLR421C	ECM22	Q05958	814 aa	Predicted RBP	3.54	□□□□□ -1.84
RPN13	YLR421C	YTH1	Q06102	208 aa	Predicted RBP	3.54	□□□□□ -1.84
RPN13	YLR421C	IWR1	Q07532	353 aa	Predicted RBP	3.54	□□□□□ -1.84
RPN13	YLR421C	DBP10	Q12389	995 aa	Known RBP	3.54	□□□□□ -1.84
RPN13	YLR421C	RRI1	Q12468	440 aa		3.54	□□□□□ -1.84
RPN13	YLR421C	SIR4	P11978	1358 aa		3.53	□□□□□ -1.84
RPN13	YLR421C	KRE5	P22023	1365 aa		3.53	□□□□□ -1.84
RPN13	YLR421C	PSK1	P31374	1356 aa		3.53	□□□□□ -1.84
RPN13	YLR421C	FUM1	P08417	488 aa	Known RBP	3.53	□□□□□ -1.84
RPN13	YLR421C	CDC16	P09798	840 aa		3.53	□□□□□ -1.84
RPN13	YLR421C	AAC3	P18238	307 aa		3.53	□□□□□ -1.84
RPN13	YLR421C	CLB1	P24868	471 aa		3.53	□□□□□ -1.84
RPN13	YLR421C	DEP1	P31385	405 aa		3.53	□□□□□ -1.84
RPN13	YLR421C	RPS0A	P32905	252 aa	Known RBP	3.53	□□□□□ -1.84
RPN13	YLR421C	NOP4	P37838	685 aa	Known RBP	3.53	□□□□□ -1.84
RPN13	YLR421C	IFA38	P38286	347 aa		3.53	□□□□□ -1.84
RPN13	YLR421C	MET30	P39014	640 aa		3.53	□□□□□ -1.84
RPN13	YLR421C	YER010C	P40011	234 aa		3.53	□□□□□ -1.84
RPN13	YLR421C	VTC3	Q02725	835 aa		3.53	□□□□□ -1.84
RPN13	YLR421C	TAF11	Q04226	346 aa		3.53	□□□□□ -1.84
RPN13	YLR421C	CSR1	Q06705	408 aa	Known RBP	3.53	□□□□□ -1.84
RPN13	YLR421C	GRS2	Q06817	618 aa		3.53	□□□□□ -1.84
RPN13	YLR421C	CRD1	Q07560	283 aa		3.53	□□□□□ -1.84
RPN13	YLR421C	AAD4	Q07747	329 aa		3.53	□□□□□ -1.84
RPN13	YLR421C	MLH2	Q07980	695 aa		3.53	□□□□□ -1.84
RPN13	YLR421C	TRM8	Q12009	286 aa		3.53	□□□□□ -1.84
RPN13	YLR421C	YER175W-A	Q8TGU4	54 aa		3.53	□□□□□ -1.84
RPN13	YLR421C	MLP1	Q02455	1875 aa	Known RBP	3.53	□□□□□ -1.84
RPN13	YLR421C	SES1	P07284	462 aa	Known RBP	3.52	□□□□□ -1.85
RPN13	YLR421C	NUC1	P08466	329 aa		3.52	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 49 ms