RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C BUR6P40096 142 aa2.4□□□□□ -2.03
UBP11YKR098C ASG1P40467 964 aa2.4□□□□□ -2.03
UBP11YKR098C MET18P40469 1032 aa2.4□□□□□ -2.03
UBP11YKR098C SGN1P40561 250 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
UBP11YKR098C ROK1P45818 564 aaPredicted RBP2.4□□□□□ -2.03
UBP11YKR098C CTK2P46962 323 aa2.4□□□□□ -2.03
UBP11YKR098C DPB11P47027 764 aaPredicted RBP2.4□□□□□ -2.03
UBP11YKR098C YGR066CP53242 292 aa2.4□□□□□ -2.03
UBP11YKR098C AAT1Q01802 451 aa2.4□□□□□ -2.03
UBP11YKR098C GRC3Q07845 632 aa2.4□□□□□ -2.03
UBP11YKR098C ATG9Q12142 997 aa2.4□□□□□ -2.03
UBP11YKR098C YOL159C-AQ3E769 90 aa2.4□□□□□ -2.03
UBP11YKR098C HXK2P04807 486 aaKnown RBP2.39□□□□□ -2.03
UBP11YKR098C ILV2P07342 687 aaKnown RBP2.39□□□□□ -2.03
UBP11YKR098C PDX1P16451 410 aa2.39□□□□□ -2.03
UBP11YKR098C VMA16P23968 213 aa2.39□□□□□ -2.03
UBP11YKR098C DIA4P38705 446 aaPredicted RBP2.39□□□□□ -2.03
UBP11YKR098C UIP3P39547 235 aa2.39□□□□□ -2.03
UBP11YKR098C YFR020WP43600 232 aa2.39□□□□□ -2.03
UBP11YKR098C SAE2P46946 345 aa2.39□□□□□ -2.03
UBP11YKR098C RPS7BP48164 190 aaKnown RBP2.39□□□□□ -2.03
UBP11YKR098C YPR003CP53394 754 aa2.39□□□□□ -2.03
UBP11YKR098C IST1P53843 298 aaPredicted RBP2.39□□□□□ -2.03
UBP11YKR098C YDR131CQ03899 556 aa2.39□□□□□ -2.03
UBP11YKR098C RPC11Q04307 110 aaPredicted RBP2.39□□□□□ -2.03
UBP11YKR098C BUD22Q04347 519 aaKnown RBP2.39□□□□□ -2.03
UBP11YKR098C LUC7Q07508 261 aaPredicted RBP2.39□□□□□ -2.03
UBP11YKR098C ULA1Q12059 462 aa2.39□□□□□ -2.03
UBP11YKR098C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
UBP11YKR098C MAK32P23060 363 aa2.39□□□□□ -2.03
UBP11YKR098C GPI10P30777 616 aa2.39□□□□□ -2.03
UBP11YKR098C BLI1P35727 113 aa2.39□□□□□ -2.03
UBP11YKR098C UBP11P36026 717 aa2.39□□□□□ -2.03
UBP11YKR098C ADE17P38009 592 aaKnown RBP2.39□□□□□ -2.03
UBP11YKR098C SMF1P38925 575 aa2.39□□□□□ -2.03
UBP11YKR098C YEL020CP39994 560 aa2.39□□□□□ -2.03
UBP11YKR098C DOT5P40553 215 aa2.39□□□□□ -2.03
UBP11YKR098C MRK1P50873 501 aa2.39□□□□□ -2.03
UBP11YKR098C VPS38Q05919 439 aa2.39□□□□□ -2.03
UBP11YKR098C ECM22Q05958 814 aaPredicted RBP2.39□□□□□ -2.03
UBP11YKR098C INP53Q12271 1107 aa2.39□□□□□ -2.03
UBP11YKR098C RPN13O13563 156 aa2.38□□□□□ -2.03
UBP11YKR098C HEM1P09950 548 aaPredicted RBP2.38□□□□□ -2.03
UBP11YKR098C AQY1P0CD91 305 aa2.38□□□□□ -2.03
UBP11YKR098C EST1P17214 699 aaPredicted RBP2.38□□□□□ -2.03
UBP11YKR098C KGD1P20967 1014 aaKnown RBP2.38□□□□□ -2.03
UBP11YKR098C ADH7P25377 361 aa2.38□□□□□ -2.03
UBP11YKR098C GSY2P27472 705 aa2.38□□□□□ -2.03
UBP11YKR098C RPC34P32910 317 aa2.38□□□□□ -2.03
UBP11YKR098C PXA2P34230 853 aa2.38□□□□□ -2.03
UBP11YKR098C SNU114P36048 1008 aaKnown RBP2.38□□□□□ -2.03
UBP11YKR098C CST26P38226 397 aa2.38□□□□□ -2.03
UBP11YKR098C MUM2P38236 366 aa2.38□□□□□ -2.03
UBP11YKR098C AFG3P39925 761 aa2.38□□□□□ -2.03
UBP11YKR098C PKP1P40530 394 aa2.38□□□□□ -2.03
UBP11YKR098C YML6P51998 286 aa2.38□□□□□ -2.03
UBP11YKR098C YNL058CP53947 316 aa2.38□□□□□ -2.03
UBP11YKR098C EFM6P53970 246 aa2.38□□□□□ -2.03
UBP11YKR098C ZDS2P54786 942 aa2.38□□□□□ -2.03
UBP11YKR098C MAK10Q02197 733 aa2.38□□□□□ -2.03
UBP11YKR098C ARO10Q06408 635 aa2.38□□□□□ -2.03
UBP11YKR098C RTT109Q07794 436 aa2.38□□□□□ -2.03
UBP11YKR098C YOL159CQ08300 171 aa2.38□□□□□ -2.03
UBP11YKR098C FMP40Q08968 688 aaPredicted RBP2.38□□□□□ -2.03
UBP11YKR098C RIM20Q12033 661 aa2.38□□□□□ -2.03
UBP11YKR098C SUT2Q12286 268 aa2.38□□□□□ -2.03
UBP11YKR098C GAL80P04387 435 aa2.37□□□□□ -2.03
UBP11YKR098C ADE5,7P07244 802 aaKnown RBP2.37□□□□□ -2.03
UBP11YKR098C CHO1P08456 276 aa2.37□□□□□ -2.03
UBP11YKR098C SYN8P31377 255 aa2.37□□□□□ -2.03
UBP11YKR098C SSE2P32590 693 aaKnown RBP2.37□□□□□ -2.03
UBP11YKR098C WBP1P33767 430 aaKnown RBP2.37□□□□□ -2.03
UBP11YKR098C TIF3P34167 436 aaKnown RBP2.37□□□□□ -2.03
UBP11YKR098C SAS3P34218 831 aa2.37□□□□□ -2.03
UBP11YKR098C TCD2P36101 447 aaKnown RBP2.37□□□□□ -2.03
UBP11YKR098C VID24P38263 362 aa2.37□□□□□ -2.03
UBP11YKR098C ELO1P39540 310 aa2.37□□□□□ -2.03
UBP11YKR098C ERV46P39727 415 aa2.37□□□□□ -2.03
UBP11YKR098C PAC2P39937 518 aa2.37□□□□□ -2.03
UBP11YKR098C LTP1P40347 161 aa2.37□□□□□ -2.03
UBP11YKR098C CDC1P40986 491 aa2.37□□□□□ -2.03
UBP11YKR098C MAF1P41910 395 aa2.37□□□□□ -2.03
UBP11YKR098C IRC8P47046 822 aa2.37□□□□□ -2.03
UBP11YKR098C DIA3P52290 468 aa2.37□□□□□ -2.03
UBP11YKR098C VID30P53076 958 aa2.37□□□□□ -2.03
UBP11YKR098C MRD1Q06106 887 aaKnown RBP2.37□□□□□ -2.03
UBP11YKR098C YLR352WQ06479 807 aa2.37□□□□□ -2.03
UBP11YKR098C THI3Q07471 609 aa2.37□□□□□ -2.03
UBP11YKR098C AVL9Q12500 764 aa2.37□□□□□ -2.03
UBP11YKR098C SMC6Q12749 1114 aa2.37□□□□□ -2.03
UBP11YKR098C MF(ALPHA)1P01149 165 aa2.37□□□□□ -2.03
UBP11YKR098C DBF4P32325 704 aa2.37□□□□□ -2.03
UBP11YKR098C YBR144CP34215 104 aa2.37□□□□□ -2.03
UBP11YKR098C PEX5P35056 612 aa2.37□□□□□ -2.03
UBP11YKR098C SRP72P38688 640 aaKnown RBP2.37□□□□□ -2.03
UBP11YKR098C IMD2P38697 523 aaKnown RBP2.37□□□□□ -2.03
UBP11YKR098C LRP1P38801 184 aaKnown RBP2.37□□□□□ -2.03
UBP11YKR098C YJL043WP47053 257 aa2.37□□□□□ -2.03
UBP11YKR098C IMD3P50095 523 aaKnown RBP2.37□□□□□ -2.03
UBP11YKR098C SXM1Q04175 944 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 108.7 ms