RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W TIP41Q12199 356 aa3.63□□□□□ -1.83
PRE1YER012W ARP7Q12406 477 aa3.63□□□□□ -1.83
PRE1YER012W RVB2Q12464 471 aaKnown RBP3.63□□□□□ -1.83
PRE1YER012W ADE3P07245 946 aaKnown RBP3.62□□□□□ -1.83
PRE1YER012W SUI3P09064 285 aaKnown RBP3.62□□□□□ -1.83
PRE1YER012W RFA2P26754 273 aaKnown RBP3.62□□□□□ -1.83
PRE1YER012W YKL133CP36066 463 aa3.62□□□□□ -1.83
PRE1YER012W CAB2P40506 365 aa3.62□□□□□ -1.83
PRE1YER012W YRB30P53107 440 aaPredicted RBP3.62□□□□□ -1.83
PRE1YER012W APL5Q08951 932 aaKnown RBP3.62□□□□□ -1.83
PRE1YER012W ROM2P51862 1356 aaKnown RBP3.62□□□□□ -1.83
PRE1YER012W CBP1P07252 654 aa3.61□□□□□ -1.83
PRE1YER012W RIT1P23796 513 aa3.61□□□□□ -1.83
PRE1YER012W RTT107P38850 1070 aa3.61□□□□□ -1.83
PRE1YER012W UBP8P50102 471 aa3.61□□□□□ -1.83
PRE1YER012W MOT3P54785 490 aaKnown RBP3.61□□□□□ -1.83
PRE1YER012W YPL108WQ02872 168 aaPredicted RBP3.61□□□□□ -1.83
PRE1YER012W CAC2Q04199 468 aa3.61□□□□□ -1.83
PRE1YER012W SUL2Q12325 893 aa3.61□□□□□ -1.83
PRE1YER012W PCT1P13259 424 aa3.6□□□□□ -1.83
PRE1YER012W EAF6P47128 113 aa3.6□□□□□ -1.83
PRE1YER012W MSY1P48527 492 aa3.6□□□□□ -1.83
PRE1YER012W GPN2Q08726 347 aaPredicted RBP3.6□□□□□ -1.83
PRE1YER012W YOL114CQ12322 202 aa3.6□□□□□ -1.83
PRE1YER012W MPD2Q99316 277 aa3.6□□□□□ -1.83
PRE1YER012W RPO41P13433 1351 aaKnown RBP3.6□□□□□ -1.83
PRE1YER012W POL3P15436 1097 aa3.59□□□□□ -1.83
PRE1YER012W PSP1P50896 841 aaKnown RBP3.59□□□□□ -1.83
PRE1YER012W TGL2P54857 326 aa3.59□□□□□ -1.83
PRE1YER012W HIM1Q06674 414 aa3.59□□□□□ -1.83
PRE1YER012W PMD1P32634 1753 aa3.58□□□□□ -1.84
PRE1YER012W HNM1P19807 563 aa3.58□□□□□ -1.84
PRE1YER012W SIR1P21691 654 aa3.58□□□□□ -1.84
PRE1YER012W EFM2P38347 419 aa3.58□□□□□ -1.84
PRE1YER012W SMA1Q02651 245 aa3.58□□□□□ -1.84
PRE1YER012W SND1Q04007 877 aa3.58□□□□□ -1.84
PRE1YER012W SWF1Q04629 336 aa3.58□□□□□ -1.84
PRE1YER012W RTT103Q05543 409 aa3.58□□□□□ -1.84
PRE1YER012W YSP3P25036 478 aa3.57□□□□□ -1.84
PRE1YER012W MGR1P25573 417 aa3.57□□□□□ -1.84
PRE1YER012W ADE17P38009 592 aaKnown RBP3.57□□□□□ -1.84
PRE1YER012W BZZ1P38822 633 aa3.57□□□□□ -1.84
PRE1YER012W BUD16P39988 312 aa3.57□□□□□ -1.84
PRE1YER012W ATG21Q02887 496 aa3.57□□□□□ -1.84
PRE1YER012W YMR254CQ04838 102 aa3.57□□□□□ -1.84
PRE1YER012W GTB1Q04924 702 aa3.57□□□□□ -1.84
PRE1YER012W YLR455WQ06188 304 aa3.57□□□□□ -1.84
PRE1YER012W RIX7Q07844 837 aaKnown RBP3.57□□□□□ -1.84
PRE1YER012W YLR049CQ12110 428 aa3.57□□□□□ -1.84
PRE1YER012W UTP10P42945 1769 aaKnown RBP3.56□□□□□ -1.84
PRE1YER012W SIR4P11978 1358 aa3.56□□□□□ -1.84
PRE1YER012W PET122P10355 254 aa3.56□□□□□ -1.84
PRE1YER012W MRP2P10663 115 aaPredicted RBP3.56□□□□□ -1.84
PRE1YER012W YEF3P16521 1044 aaKnown RBP3.56□□□□□ -1.84
PRE1YER012W CDC23P16522 626 aa3.56□□□□□ -1.84
PRE1YER012W SEC1P30619 724 aaKnown RBP3.56□□□□□ -1.84
PRE1YER012W ARP2P32381 391 aaKnown RBP3.56□□□□□ -1.84
PRE1YER012W UBP13P38187 747 aa3.56□□□□□ -1.84
PRE1YER012W RKM3P38222 552 aa3.56□□□□□ -1.84
PRE1YER012W LEU5P38702 357 aa3.56□□□□□ -1.84
PRE1YER012W ECI1Q05871 280 aa3.56□□□□□ -1.84
PRE1YER012W APM3P38153 483 aa3.55□□□□□ -1.84
PRE1YER012W SKP2P42843 763 aa3.55□□□□□ -1.84
PRE1YER012W IML2P47031 731 aa3.55□□□□□ -1.84
PRE1YER012W TEP1P53916 434 aa3.55□□□□□ -1.84
PRE1YER012W ASI1P54074 624 aa3.55□□□□□ -1.84
PRE1YER012W MTG1Q03151 367 aaPredicted RBP3.55□□□□□ -1.84
PRE1YER012W PFA5Q03289 374 aa3.55□□□□□ -1.84
PRE1YER012W TOM1Q03280 3268 aa3.55□□□□□ -1.84
PRE1YER012W FAS2P19097 1887 aaKnown RBP3.54□□□□□ -1.84
PRE1YER012W CHO1P08456 276 aa3.54□□□□□ -1.84
PRE1YER012W YML003WP0CF16 290 aa3.54□□□□□ -1.84
PRE1YER012W OSM1P21375 501 aaKnown RBP3.54□□□□□ -1.84
PRE1YER012W MRC1P25588 1096 aa3.54□□□□□ -1.84
PRE1YER012W ZAP1P47043 880 aa3.54□□□□□ -1.84
PRE1YER012W YNL234WP53857 426 aa3.54□□□□□ -1.84
PRE1YER012W YLR281CQ05863 155 aa3.54□□□□□ -1.84
PRE1YER012W UTP21Q06078 939 aaPredicted RBP3.54□□□□□ -1.84
PRE1YER012W IWR1Q07532 353 aaPredicted RBP3.54□□□□□ -1.84
PRE1YER012W MCM3P24279 971 aaKnown RBP3.53□□□□□ -1.84
PRE1YER012W PDR3P33200 976 aa3.53□□□□□ -1.84
PRE1YER012W YOX1P34161 385 aa3.53□□□□□ -1.84
PRE1YER012W SGF73P53165 657 aa3.53□□□□□ -1.84
PRE1YER012W TAH18Q12181 623 aa3.53□□□□□ -1.84
PRE1YER012W EDE1P34216 1381 aa3.52□□□□□ -1.85
PRE1YER012W BAR1P12630 587 aa3.52□□□□□ -1.85
PRE1YER012W GCD7P32502 381 aaPredicted RBP3.52□□□□□ -1.85
PRE1YER012W DHH1P39517 506 aaKnown RBP3.52□□□□□ -1.85
PRE1YER012W YLR352WQ06479 807 aa3.52□□□□□ -1.85
PRE1YER012W SWA2Q06677 668 aa3.52□□□□□ -1.85
PRE1YER012W BSC1Q12140 328 aa3.52□□□□□ -1.85
PRE1YER012W PET111P08468 800 aa3.51□□□□□ -1.85
PRE1YER012W RAD24P32641 659 aa3.51□□□□□ -1.85
PRE1YER012W YBR138CP38277 524 aa3.51□□□□□ -1.85
PRE1YER012W SPC72P39723 622 aa3.51□□□□□ -1.85
PRE1YER012W DJP1P40564 432 aa3.51□□□□□ -1.85
PRE1YER012W HXT9P40885 567 aa3.51□□□□□ -1.85
PRE1YER012W ERR3P42222 437 aa3.51□□□□□ -1.85
PRE1YER012W YNL181WP53878 407 aa3.51□□□□□ -1.85
PRE1YER012W CTI6Q08923 506 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms