RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	TSC10	P38342	320 aa		4.74	□□□□□ -1.65
SUP35	YDR172W	URA8	P38627	578 aa	Predicted RBP	4.74	□□□□□ -1.65
SUP35	YDR172W	CRP1	P38845	465 aa	Known RBP	4.74	□□□□□ -1.65
SUP35	YDR172W	OPT1	P40897	799 aa		4.74	□□□□□ -1.65
SUP35	YDR172W	PRY1	P47032	299 aa		4.74	□□□□□ -1.65
SUP35	YDR172W	MTD1	Q02046	320 aa	Known RBP	4.74	□□□□□ -1.65
SUP35	YDR172W	YMR155W	Q03795	547 aa		4.74	□□□□□ -1.65
SUP35	YDR172W	FAR10	Q06001	478 aa		4.74	□□□□□ -1.65
SUP35	YDR172W	PMT7	Q06644	662 aa		4.74	□□□□□ -1.65
SUP35	YDR172W	YDL073W	Q07454	984 aa		4.74	□□□□□ -1.65
SUP35	YDR172W	GPN2	Q08726	347 aa	Predicted RBP	4.74	□□□□□ -1.65
SUP35	YDR172W	SPE3	Q12074	293 aa	Known RBP	4.74	□□□□□ -1.65
SUP35	YDR172W	YPR089W	O13585	888 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	ATP1	P07251	545 aa	Known RBP	4.73	□□□□□ -1.65
SUP35	YDR172W	MAS1	P10507	462 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	HSF1	P10961	833 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	INO1	P11986	533 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	GLN4	P13188	809 aa	Known RBP	4.73	□□□□□ -1.65
SUP35	YDR172W	NDI1	P32340	513 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	PHA2	P32452	334 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	SMI1	P32566	505 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	PEP7	P32609	515 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	PEX5	P35056	612 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	CTP1	P38152	299 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	ATG12	P38316	186 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	SHU2	P38957	223 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	ALG5	P40350	334 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	ROK1	P45818	564 aa	Predicted RBP	4.73	□□□□□ -1.65
SUP35	YDR172W	REG1	Q00816	1014 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	GCN5	Q03330	439 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	SPO71	Q03868	1245 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	NHX1	Q04121	633 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	TAF11	Q04226	346 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	LCB4	Q12246	624 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	OCA6	Q12454	224 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	HIS1	P00498	297 aa	Known RBP	4.73	□□□□□ -1.65
SUP35	YDR172W	PRC1	P00729	532 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
SUP35	YDR172W	ATP12	P22135	325 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	ASK1	P35734	292 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	TRM112	P53738	135 aa	Predicted RBP	4.73	□□□□□ -1.65
SUP35	YDR172W	RLI1	Q03195	608 aa	Known RBP	4.73	□□□□□ -1.65
SUP35	YDR172W	INP2	Q03824	705 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	DAL4	Q04895	635 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	ECM22	Q05958	814 aa	Predicted RBP	4.73	□□□□□ -1.65
SUP35	YDR172W	AFI1	Q99222	893 aa		4.73	□□□□□ -1.65
SUP35	YDR172W	MPH2	P0CD99	609 aa		4.72	□□□□□ -1.65
SUP35	YDR172W	VPS34	P22543	875 aa		4.72	□□□□□ -1.65
SUP35	YDR172W	BEM1	P29366	551 aa		4.72	□□□□□ -1.65
SUP35	YDR172W	HEM12	P32347	362 aa	Predicted RBP	4.72	□□□□□ -1.65
SUP35	YDR172W	DSS4	P32601	143 aa		4.72	□□□□□ -1.65
SUP35	YDR172W	BEM3	P32873	1128 aa		4.72	□□□□□ -1.65
SUP35	YDR172W	WHI3	P34761	661 aa	Known RBP	4.72	□□□□□ -1.65
SUP35	YDR172W	NUP120	P35729	1037 aa		4.72	□□□□□ -1.65
SUP35	YDR172W	CUE2	P36075	443 aa	Known RBP	4.72	□□□□□ -1.65
SUP35	YDR172W	YBR225W	P38321	900 aa		4.72	□□□□□ -1.65
SUP35	YDR172W	SEO1	P39709	593 aa		4.72	□□□□□ -1.65
SUP35	YDR172W	FRT2	P39734	528 aa		4.72	□□□□□ -1.65
SUP35	YDR172W	ELO3	P40319	345 aa		4.72	□□□□□ -1.65
SUP35	YDR172W	PRM2	P40534	656 aa		4.72	□□□□□ -1.65
SUP35	YDR172W	YJL132W	P47014	750 aa		4.72	□□□□□ -1.65
SUP35	YDR172W	MIG2	P53035	382 aa		4.72	□□□□□ -1.65
SUP35	YDR172W	RCF2	P53721	224 aa		4.72	□□□□□ -1.65
SUP35	YDR172W	IST1	P53843	298 aa	Predicted RBP	4.72	□□□□□ -1.65
SUP35	YDR172W	NOP15	P53927	220 aa	Predicted RBP	4.72	□□□□□ -1.65
SUP35	YDR172W	CEG1	Q01159	459 aa	Predicted RBP	4.72	□□□□□ -1.65
SUP35	YDR172W	TRS31	Q03337	283 aa		4.72	□□□□□ -1.65
SUP35	YDR172W	YDR476C	Q03362	224 aa		4.72	□□□□□ -1.65
SUP35	YDR172W	ENT5	Q03769	411 aa	Known RBP	4.72	□□□□□ -1.65
SUP35	YDR172W	HTS1	P07263	546 aa	Known RBP	4.71	□□□□□ -1.65
SUP35	YDR172W	SAC7	P17121	654 aa		4.71	□□□□□ -1.65
SUP35	YDR172W	MSH2	P25847	964 aa		4.71	□□□□□ -1.65
SUP35	YDR172W	BUD14	P27637	709 aa		4.71	□□□□□ -1.65
SUP35	YDR172W	SIN4	P32259	974 aa		4.71	□□□□□ -1.65
SUP35	YDR172W	RIM1	P32445	135 aa	Known RBP	4.71	□□□□□ -1.65
SUP35	YDR172W	HES1	P35843	434 aa		4.71	□□□□□ -1.65
SUP35	YDR172W	YHR182W	P38870	785 aa		4.71	□□□□□ -1.65
SUP35	YDR172W	FAA3	P39002	694 aa		4.71	□□□□□ -1.65
SUP35	YDR172W	JHD1	P40034	492 aa		4.71	□□□□□ -1.65
SUP35	YDR172W	YIL001W	P40560	513 aa		4.71	□□□□□ -1.65
SUP35	YDR172W	VMA13	P41807	478 aa	Known RBP	4.71	□□□□□ -1.65
SUP35	YDR172W	YFL052W	P43551	465 aa		4.71	□□□□□ -1.65
SUP35	YDR172W	ARC1	P46672	376 aa	Known RBP	4.71	□□□□□ -1.65
SUP35	YDR172W	VPS25	P47142	202 aa		4.71	□□□□□ -1.65
SUP35	YDR172W	AIF1	P52923	378 aa		4.71	□□□□□ -1.65
SUP35	YDR172W	COS6	P53344	381 aa		4.71	□□□□□ -1.65
SUP35	YDR172W	COP1	P53622	1201 aa	Known RBP	4.71	□□□□□ -1.65
SUP35	YDR172W	SIW14	P53965	281 aa		4.71	□□□□□ -1.65
SUP35	YDR172W	REX2	P54964	269 aa	Known RBP	4.71	□□□□□ -1.65
SUP35	YDR172W	PNG1	Q02890	363 aa		4.71	□□□□□ -1.65
SUP35	YDR172W	RPN4	Q03465	531 aa		4.71	□□□□□ -1.65
SUP35	YDR172W	GLO2	Q05584	274 aa		4.71	□□□□□ -1.65
SUP35	YDR172W	CRN1	Q06440	651 aa		4.71	□□□□□ -1.65
SUP35	YDR172W	MRI1	Q06489	411 aa	Known RBP	4.71	□□□□□ -1.65
SUP35	YDR172W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.65	not detected
SUP35	YDR172W	TY1A-NL1	Q12391	440 aa	Known RBP	4.71	□□□□□ -1.65
SUP35	YDR172W	STE2	D6VTK4	431 aa		4.71	□□□□□ -1.66
SUP35	YDR172W	AI3	P03877	415 aa		4.71	□□□□□ -1.66
SUP35	YDR172W	RHO2	P06781	192 aa		4.71	□□□□□ -1.66
SUP35	YDR172W	GCD2	P12754	651 aa	Predicted RBP	4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms