RNA–Protein interactions for RNA: YDR034C-D

YDR034C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR034C-D, Length 5,313 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR034C-D	YDR034C-D	VPS38	Q05919	439 aa		3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	NUS1	Q12063	375 aa		3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	UBX3	Q12229	455 aa		3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	YDL177C	Q12257	170 aa		3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	RRD2	Q12461	358 aa		3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	HIS5	P07172	385 aa		3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	PRP28	P23394	588 aa		3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	ATF1	P40353	525 aa		3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	STR3	P53101	465 aa	Known RBP	3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	VTC3	Q02725	835 aa		3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	RSM24	Q03976	319 aa		3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	GAD1	Q04792	585 aa		3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	LUC7	Q07508	261 aa	Predicted RBP	3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	GAL80	P04387	435 aa		3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	AMD2	P22580	549 aa		3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	APN1	P22936	367 aa		3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	SEF1	P34228	1148 aa		3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	YBR053C	P38235	358 aa		3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	ERC1	P38767	581 aa		3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	YJL107C	P42947	387 aa		3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	YBP2	P53169	641 aa		3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	KAP120	Q02932	1032 aa		3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	ABZ2	Q03266	374 aa		3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	RTC5	Q12108	567 aa	Known RBP	3.03	□□□□□ -1.92
YDR034C-D	YDR034C-D	REG2	P38232	338 aa		3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	ALG5	P40350	334 aa		3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	LOC1	P43586	204 aa	Predicted RBP	3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	YGR266W	P53326	701 aa		3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	OGG1	P53397	376 aa	Predicted RBP	3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	MSC1	Q03104	513 aa		3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	YLR456W	Q06199	204 aa		3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	ATG23	Q06671	453 aa		3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	SDH8	P38345	138 aa		3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	YHR054C	P38780	354 aa		3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	MSY1	P48527	492 aa		3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	IMD4	P50094	524 aa	Known RBP	3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	YGR111W	P53265	400 aa		3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	BOP3	P53958	396 aa		3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	CLU1	Q03690	1277 aa	Known RBP	3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	MRI1	Q06489	411 aa	Known RBP	3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	RPS9B	P05755	195 aa	Known RBP	3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	KGD2	P19262	463 aa	Predicted RBP	3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	YMR147W	P40218	223 aa	Known RBP	3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	SGT2	Q12118	346 aa	Known RBP	3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	MDY2	Q12285	212 aa		3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	SLM4	P38247	162 aa		3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	COX18	P53239	316 aa		3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	YDL073W	Q07454	984 aa		3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	FRE5	Q08908	694 aa		3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	TCO89	Q08921	799 aa		3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	TRM11	Q12463	433 aa		3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	AVL9	Q12500	764 aa		3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	CTF3	Q12748	733 aa		3.02	□□□□□ -1.93
YDR034C-D	YDR034C-D	YJU2	P28320	278 aa	Predicted RBP	3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	CDC5	P32562	705 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	MAF1	P41910	395 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	RAD17	P48581	401 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	INP52	P50942	1183 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	VPS20	Q04272	221 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	NPC2	Q12408	173 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	MRP13	P12686	339 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	PHO84	P25297	587 aa	Known RBP	3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	BUD5	P25300	642 aa	Predicted RBP	3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	YIH1	P25637	258 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	FAA1	P30624	700 aa	Known RBP	3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	ELP2	P42935	788 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	LSB3	P43603	459 aa	Known RBP	3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	SHE10	P53075	577 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	EFM6	P53970	246 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	ECM18	Q04623	453 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	HER1	Q12276	1246 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	CHD1	P32657	1468 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	YME2	P32843	850 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	ARP1	P38696	384 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	MKT1	P40850	830 aa	Known RBP	3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	HXT14	P42833	540 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	AGX1	P43567	385 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	YGR079W	P53249	370 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	RHO5	P53879	331 aa	Known RBP	3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	ACL4	Q03771	387 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	FIN1	Q03898	291 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	SIR3	P06701	978 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	AKR1	P39010	764 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	RPN11	P43588	306 aa	Known RBP	3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	SLG1	P54867	378 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	SWM1	Q12379	170 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	SEC39	Q12745	709 aa		3.01	□□□□□ -1.93
YDR034C-D	YDR034C-D	PHO91	P27514	894 aa		3	□□□□□ -1.93
YDR034C-D	YDR034C-D	SRB2	P34162	210 aa		3	□□□□□ -1.93
YDR034C-D	YDR034C-D	PXL1	P36166	706 aa		3	□□□□□ -1.93
YDR034C-D	YDR034C-D	TAT1	P38085	619 aa		3	□□□□□ -1.93
YDR034C-D	YDR034C-D	MNP1	P53163	194 aa	Predicted RBP	3	□□□□□ -1.93
YDR034C-D	YDR034C-D	SPH1	Q06160	661 aa		3	□□□□□ -1.93
YDR034C-D	YDR034C-D	CTT1	P06115	562 aa		3	□□□□□ -1.93
YDR034C-D	YDR034C-D	SSE2	P32590	693 aa	Known RBP	3	□□□□□ -1.93
YDR034C-D	YDR034C-D	HES1	P35843	434 aa		3	□□□□□ -1.93
YDR034C-D	YDR034C-D	YBR139W	P38109	508 aa		3	□□□□□ -1.93
YDR034C-D	YDR034C-D	KTR3	P38130	404 aa	Predicted RBP	3	□□□□□ -1.93
YDR034C-D	YDR034C-D	KEL1	P38853	1164 aa	Known RBP	3	□□□□□ -1.93
YDR034C-D	YDR034C-D	NPA3	P47122	385 aa		3	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 88.1 ms