RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	ARG7	Q04728	441 aa		5.79	□□□□□ -1.48
ATG12	YBR217W	HBT1	Q07653	1046 aa	Known RBP	5.79	□□□□□ -1.48
ATG12	YBR217W	ADY3	Q07732	790 aa		5.79	□□□□□ -1.48
ATG12	YBR217W	BUD7	Q08754	746 aa		5.79	□□□□□ -1.48
ATG12	YBR217W	RTK1	Q12100	620 aa	Predicted RBP	5.79	□□□□□ -1.48
ATG12	YBR217W	BRR2	P32639	2163 aa	Known RBP	5.79	□□□□□ -1.48
ATG12	YBR217W	INH1	P01097	85 aa		5.78	□□□□□ -1.48
ATG12	YBR217W	ATP12	P22135	325 aa		5.78	□□□□□ -1.48
ATG12	YBR217W	PHO3	P24031	467 aa		5.78	□□□□□ -1.48
ATG12	YBR217W	RRP1	P35178	278 aa	Predicted RBP	5.78	□□□□□ -1.48
ATG12	YBR217W	TOM20	P35180	183 aa		5.78	□□□□□ -1.48
ATG12	YBR217W	STB6	P36085	766 aa		5.78	□□□□□ -1.48
ATG12	YBR217W	RPC37	P36121	282 aa		5.78	□□□□□ -1.48
ATG12	YBR217W	GMH1	P36125	273 aa		5.78	□□□□□ -1.48
ATG12	YBR217W	IME4	P41833	600 aa		5.78	□□□□□ -1.48
ATG12	YBR217W	SUM1	P46676	1062 aa		5.78	□□□□□ -1.48
ATG12	YBR217W	CIS3	P47001	227 aa		5.78	□□□□□ -1.48
ATG12	YBR217W	YGL108C	P53139	140 aa		5.78	□□□□□ -1.48
ATG12	YBR217W	HST2	P53686	357 aa		5.78	□□□□□ -1.48
ATG12	YBR217W	OSH6	Q02201	448 aa		5.78	□□□□□ -1.48
ATG12	YBR217W	TRM82	Q03774	444 aa		5.78	□□□□□ -1.48
ATG12	YBR217W	RCO1	Q04779	684 aa		5.78	□□□□□ -1.48
ATG12	YBR217W	CDC123	Q05791	360 aa		5.78	□□□□□ -1.48
ATG12	YBR217W	OPT2	Q06593	877 aa		5.78	□□□□□ -1.48
ATG12	YBR217W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	5.78	□□□□□ -1.48	not detected
ATG12	YBR217W	RPN8	Q08723	338 aa	Known RBP	5.78	□□□□□ -1.48
ATG12	YBR217W	SRO7	Q12038	1033 aa		5.78	□□□□□ -1.48
ATG12	YBR217W	YPR089W	O13585	888 aa		5.77	□□□□□ -1.49
ATG12	YBR217W	CPA1	P07258	411 aa	Known RBP	5.77	□□□□□ -1.49
ATG12	YBR217W	ADH4	P10127	382 aa		5.77	□□□□□ -1.49
ATG12	YBR217W	GPA2	P10823	449 aa		5.77	□□□□□ -1.49
ATG12	YBR217W	RED1	P14291	827 aa		5.77	□□□□□ -1.49
ATG12	YBR217W	SEC14	P24280	304 aa	Known RBP	5.77	□□□□□ -1.49
ATG12	YBR217W	ERG6	P25087	383 aa	Known RBP	5.77	□□□□□ -1.49
ATG12	YBR217W	DBP8	P38719	431 aa		5.77	□□□□□ -1.49
ATG12	YBR217W	TY4A-J	P47023	414 aa		5.77	□□□□□ -1.49
ATG12	YBR217W	ZIP2	P53061	704 aa		5.77	□□□□□ -1.49
ATG12	YBR217W	BUD22	Q04347	519 aa	Known RBP	5.77	□□□□□ -1.49
ATG12	YBR217W	NUT2	Q06213	157 aa		5.77	□□□□□ -1.49
ATG12	YBR217W	SYT1	Q06836	1226 aa		5.77	□□□□□ -1.49
ATG12	YBR217W	YET3	Q07451	203 aa		5.77	□□□□□ -1.49
ATG12	YBR217W	VPS68	Q12016	184 aa		5.77	□□□□□ -1.49
ATG12	YBR217W	NUS1	Q12063	375 aa		5.77	□□□□□ -1.49
ATG12	YBR217W	MRH1	Q12117	320 aa	Predicted RBP	5.77	□□□□□ -1.49
ATG12	YBR217W	STT4	P37297	1900 aa		5.76	□□□□□ -1.49
ATG12	YBR217W	STE2	D6VTK4	431 aa		5.76	□□□□□ -1.49
ATG12	YBR217W	RPL1A	P0CX43	217 aa	Known RBP	5.76	□□□□□ -1.49
ATG12	YBR217W	RPL1B	P0CX44	217 aa	Known RBP	5.76	□□□□□ -1.49
ATG12	YBR217W	SBP1	P10080	294 aa	Known RBP	5.76	□□□□□ -1.49
ATG12	YBR217W	VPS34	P22543	875 aa		5.76	□□□□□ -1.49
ATG12	YBR217W	SPR1	P32603	445 aa		5.76	□□□□□ -1.49
ATG12	YBR217W	TFC3	P34111	1160 aa		5.76	□□□□□ -1.49
ATG12	YBR217W	ETR1	P38071	380 aa		5.76	□□□□□ -1.49
ATG12	YBR217W	UBP14	P38237	781 aa	Known RBP	5.76	□□□□□ -1.49
ATG12	YBR217W	YSW1	P38280	609 aa		5.76	□□□□□ -1.49
ATG12	YBR217W	YPT35	P38815	214 aa	Known RBP	5.76	□□□□□ -1.49
ATG12	YBR217W	LSM5	P40089	93 aa	Known RBP	5.76	□□□□□ -1.49
ATG12	YBR217W	SMX2	P40204	77 aa	Known RBP	5.76	□□□□□ -1.49
ATG12	YBR217W	YFR018C	P43599	363 aa		5.76	□□□□□ -1.49
ATG12	YBR217W	KTR5	P53966	522 aa	Predicted RBP	5.76	□□□□□ -1.49
ATG12	YBR217W	TGL2	P54857	326 aa		5.76	□□□□□ -1.49
ATG12	YBR217W	SHR3	Q02774	210 aa		5.76	□□□□□ -1.49
ATG12	YBR217W	YML096W	Q04489	525 aa		5.76	□□□□□ -1.49
ATG12	YBR217W	BLS1	Q06071	122 aa		5.76	□□□□□ -1.49
ATG12	YBR217W	VTA1	Q06263	330 aa		5.76	□□□□□ -1.49
ATG12	YBR217W	RSC2	Q06488	889 aa		5.76	□□□□□ -1.49
ATG12	YBR217W	FRA1	Q07825	749 aa		5.76	□□□□□ -1.49
ATG12	YBR217W	THI73	Q07904	523 aa		5.76	□□□□□ -1.49
ATG12	YBR217W	UPC2	Q12151	913 aa		5.76	□□□□□ -1.49
ATG12	YBR217W	RDS2	P19541	446 aa	Known RBP	5.75	□□□□□ -1.49
ATG12	YBR217W	YSR3	P23501	404 aa		5.75	□□□□□ -1.49
ATG12	YBR217W	PPH21	P23594	369 aa		5.75	□□□□□ -1.49
ATG12	YBR217W	PHO84	P25297	587 aa	Known RBP	5.75	□□□□□ -1.49
ATG12	YBR217W	RSC6	P25632	483 aa		5.75	□□□□□ -1.49
ATG12	YBR217W	GCD11	P32481	527 aa	Known RBP	5.75	□□□□□ -1.49
ATG12	YBR217W	YME1	P32795	747 aa		5.75	□□□□□ -1.49
ATG12	YBR217W	LRG1	P35688	1017 aa		5.75	□□□□□ -1.49
ATG12	YBR217W	CCT2	P39076	527 aa	Known RBP	5.75	□□□□□ -1.49
ATG12	YBR217W	CCT6	P39079	546 aa		5.75	□□□□□ -1.49
ATG12	YBR217W	ELO1	P39540	310 aa		5.75	□□□□□ -1.49
ATG12	YBR217W	BIR1	P47134	954 aa		5.75	□□□□□ -1.49
ATG12	YBR217W	ARH1	P48360	493 aa		5.75	□□□□□ -1.49
ATG12	YBR217W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.75	□□□□□ -1.49	RIP-Chip
ATG12	YBR217W	ECM9	Q02202	377 aa		5.75	□□□□□ -1.49
ATG12	YBR217W	CCE1	Q03702	353 aa		5.75	□□□□□ -1.49
ATG12	YBR217W	CRN1	Q06440	651 aa		5.75	□□□□□ -1.49
ATG12	YBR217W	RSC3	Q06639	885 aa		5.75	□□□□□ -1.49
ATG12	YBR217W	PLB3	Q08108	686 aa		5.75	□□□□□ -1.49
ATG12	YBR217W	RKM5	Q12367	367 aa		5.75	□□□□□ -1.49
ATG12	YBR217W	GTT2	Q12390	233 aa		5.75	□□□□□ -1.49
ATG12	YBR217W	YMR030W-A	Q3E760	96 aa		5.75	□□□□□ -1.49
ATG12	YBR217W	IRA1	P18963	3092 aa		5.74	□□□□□ -1.49
ATG12	YBR217W	SEM1	O94742	89 aa		5.74	□□□□□ -1.49
ATG12	YBR217W	PHO5	P00635	467 aa		5.74	□□□□□ -1.49
ATG12	YBR217W	ARG4	P04076	463 aa	Predicted RBP	5.74	□□□□□ -1.49
ATG12	YBR217W	ABF1	P14164	731 aa		5.74	□□□□□ -1.49
ATG12	YBR217W	MRPL25	P23369	157 aa		5.74	□□□□□ -1.49
ATG12	YBR217W	NFU1	P32860	256 aa		5.74	□□□□□ -1.49
ATG12	YBR217W	CYM1	P32898	989 aa		5.74	□□□□□ -1.49
ATG12	YBR217W	THI80	P35202	319 aa		5.74	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms