RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPK3	YBR028C	DSD1	P53095	428 aa		4.91	□□□□□ -1.62
YPK3	YBR028C	IST1	P53843	298 aa	Predicted RBP	4.91	□□□□□ -1.62
YPK3	YBR028C	IDP3	P53982	420 aa	Known RBP	4.91	□□□□□ -1.62
YPK3	YBR028C	RIM13	Q03792	727 aa		4.91	□□□□□ -1.62
YPK3	YBR028C	PIG1	Q06216	648 aa		4.91	□□□□□ -1.62
YPK3	YBR028C	PSR1	Q07800	427 aa		4.91	□□□□□ -1.62
YPK3	YBR028C	MCH4	Q08268	501 aa		4.91	□□□□□ -1.62
YPK3	YBR028C	TCO89	Q08921	799 aa		4.91	□□□□□ -1.62
YPK3	YBR028C	NMD4	Q12129	218 aa		4.91	□□□□□ -1.62
YPK3	YBR028C	NOP58	Q12499	511 aa	Known RBP	4.91	□□□□□ -1.62
YPK3	YBR028C	COQ3	P27680	312 aa		4.91	□□□□□ -1.62
YPK3	YBR028C	AUR1	P36107	401 aa	Predicted RBP	4.91	□□□□□ -1.62
YPK3	YBR028C	YBR225W	P38321	900 aa		4.91	□□□□□ -1.62
YPK3	YBR028C	PKP1	P40530	394 aa		4.91	□□□□□ -1.62
YPK3	YBR028C	DPB11	P47027	764 aa	Predicted RBP	4.91	□□□□□ -1.62
YPK3	YBR028C	MRX6	P48564	524 aa		4.91	□□□□□ -1.62
YPK3	YBR028C	MDM1	Q01846	1127 aa		4.91	□□□□□ -1.62
YPK3	YBR028C	PFA5	Q03289	374 aa		4.91	□□□□□ -1.62
YPK3	YBR028C	RTP1	Q12751	981 aa		4.91	□□□□□ -1.62
YPK3	YBR028C	STE50	P25344	346 aa		4.9	□□□□□ -1.63
YPK3	YBR028C	NOP4	P37838	685 aa	Known RBP	4.9	□□□□□ -1.63
YPK3	YBR028C	DIA4	P38705	446 aa	Predicted RBP	4.9	□□□□□ -1.63
YPK3	YBR028C	VPS41	P38959	992 aa		4.9	□□□□□ -1.63
YPK3	YBR028C	FLC2	P39719	783 aa		4.9	□□□□□ -1.63
YPK3	YBR028C	BUR6	P40096	142 aa		4.9	□□□□□ -1.63
YPK3	YBR028C	SNO3	P43544	222 aa		4.9	□□□□□ -1.63
YPK3	YBR028C	LCL3	P53153	274 aa		4.9	□□□□□ -1.63
YPK3	YBR028C	SEG1	Q04279	960 aa		4.9	□□□□□ -1.63
YPK3	YBR028C	INP53	Q12271	1107 aa		4.9	□□□□□ -1.63
YPK3	YBR028C	SEC53	P07283	254 aa	Known RBP	4.89	□□□□□ -1.63
YPK3	YBR028C	TKL1	P23254	680 aa	Known RBP	4.89	□□□□□ -1.63
YPK3	YBR028C	NPR2	P39923	615 aa		4.89	□□□□□ -1.63
YPK3	YBR028C	VPS75	P53853	264 aa		4.89	□□□□□ -1.63
YPK3	YBR028C	YML037C	Q03703	340 aa		4.89	□□□□□ -1.63
YPK3	YBR028C	FRE3	Q08905	711 aa		4.89	□□□□□ -1.63
YPK3	YBR028C	YLR049C	Q12110	428 aa		4.89	□□□□□ -1.63
YPK3	YBR028C	SNU114	P36048	1008 aa	Known RBP	4.88	□□□□□ -1.63
YPK3	YBR028C	UIP3	P39547	235 aa		4.88	□□□□□ -1.63
YPK3	YBR028C	YTP1	P53584	459 aa		4.88	□□□□□ -1.63
YPK3	YBR028C	ASI1	P54074	624 aa		4.88	□□□□□ -1.63
YPK3	YBR028C	MFB1	Q04922	465 aa		4.88	□□□□□ -1.63
YPK3	YBR028C	ARD1	P07347	238 aa	Predicted RBP	4.87	□□□□□ -1.63
YPK3	YBR028C	RAP1	P11938	827 aa		4.87	□□□□□ -1.63
YPK3	YBR028C	KRS1	P15180	591 aa	Known RBP	4.87	□□□□□ -1.63
YPK3	YBR028C	CMK1	P27466	446 aa	Known RBP	4.87	□□□□□ -1.63
YPK3	YBR028C	CCT6	P39079	546 aa		4.87	□□□□□ -1.63
YPK3	YBR028C	STR3	P53101	465 aa	Known RBP	4.87	□□□□□ -1.63
YPK3	YBR028C	RBG2	P53295	368 aa	Known RBP	4.87	□□□□□ -1.63
YPK3	YBR028C	COP1	P53622	1201 aa	Known RBP	4.87	□□□□□ -1.63
YPK3	YBR028C	TDA9	Q04545	1251 aa		4.87	□□□□□ -1.63
YPK3	YBR028C	TSR2	Q06672	205 aa	Known RBP	4.87	□□□□□ -1.63
YPK3	YBR028C	RTT109	Q07794	436 aa		4.87	□□□□□ -1.63
YPK3	YBR028C	CTI6	Q08923	506 aa		4.87	□□□□□ -1.63
YPK3	YBR028C	CRC1	Q12289	327 aa		4.87	□□□□□ -1.63
YPK3	YBR028C	CNA1	P23287	553 aa		4.87	□□□□□ -1.63
YPK3	YBR028C	VMA16	P23968	213 aa		4.87	□□□□□ -1.63
YPK3	YBR028C	CLB2	P24869	491 aa		4.87	□□□□□ -1.63
YPK3	YBR028C	AGP2	P38090	596 aa		4.87	□□□□□ -1.63
YPK3	YBR028C	ULP2	P40537	1034 aa	Predicted RBP	4.87	□□□□□ -1.63
YPK3	YBR028C	GLO1	P50107	326 aa		4.87	□□□□□ -1.63
YPK3	YBR028C	DIA3	P52290	468 aa		4.87	□□□□□ -1.63
YPK3	YBR028C	ZDS2	P54786	942 aa		4.87	□□□□□ -1.63
YPK3	YBR028C	ERG13	P54839	491 aa	Known RBP	4.87	□□□□□ -1.63
YPK3	YBR028C	MAK10	Q02197	733 aa		4.87	□□□□□ -1.63
YPK3	YBR028C	ARP9	Q05123	467 aa		4.87	□□□□□ -1.63
YPK3	YBR028C	RRI1	Q12468	440 aa		4.87	□□□□□ -1.63
YPK3	YBR028C	INH1	P01097	85 aa		4.86	□□□□□ -1.63
YPK3	YBR028C	CDC31	P06704	161 aa	Known RBP	4.86	□□□□□ -1.63
YPK3	YBR028C	MRP7	P12687	371 aa		4.86	□□□□□ -1.63
YPK3	YBR028C	YAP1	P19880	650 aa	Known RBP	4.86	□□□□□ -1.63
YPK3	YBR028C	SAC1	P32368	623 aa	Known RBP	4.86	□□□□□ -1.63
YPK3	YBR028C	XBP1	P40489	647 aa		4.86	□□□□□ -1.63
YPK3	YBR028C	NNF2	P53253	936 aa		4.86	□□□□□ -1.63
YPK3	YBR028C	RCN2	Q12044	265 aa		4.86	□□□□□ -1.63
YPK3	YBR028C	GCN4	P03069	281 aa		4.85	□□□□□ -1.63
YPK3	YBR028C	KGD1	P20967	1014 aa	Known RBP	4.85	□□□□□ -1.63
YPK3	YBR028C	SYN8	P31377	255 aa		4.85	□□□□□ -1.63
YPK3	YBR028C	ARP1	P38696	384 aa		4.85	□□□□□ -1.63
YPK3	YBR028C	ELO1	P39540	310 aa		4.85	□□□□□ -1.63
YPK3	YBR028C	RGI2	P40188	164 aa		4.85	□□□□□ -1.63
YPK3	YBR028C	YIL024C	P40543	189 aa		4.85	□□□□□ -1.63
YPK3	YBR028C	IRC6	P43615	237 aa		4.85	□□□□□ -1.63
YPK3	YBR028C	YEH1	Q07804	573 aa		4.85	□□□□□ -1.63
YPK3	YBR028C	ADH7	P25377	361 aa		4.84	□□□□□ -1.63
YPK3	YBR028C	YIH1	P25637	258 aa		4.84	□□□□□ -1.63
YPK3	YBR028C	RMD8	P43620	662 aa		4.84	□□□□□ -1.63
YPK3	YBR028C	SMC3	P47037	1230 aa		4.84	□□□□□ -1.63
YPK3	YBR028C	BNA3	P47039	444 aa	Known RBP	4.84	□□□□□ -1.63
YPK3	YBR028C	YMR178W	Q03219	274 aa	Known RBP	4.84	□□□□□ -1.63
YPK3	YBR028C	SWF1	Q04629	336 aa		4.84	□□□□□ -1.63
YPK3	YBR028C	YPT6	Q99260	215 aa		4.84	□□□□□ -1.63
YPK3	YBR028C	CBS1	P14066	229 aa		4.83	□□□□□ -1.64
YPK3	YBR028C	ECM32	P32644	1121 aa	Known RBP	4.83	□□□□□ -1.64
YPK3	YBR028C	YKL050C	P35736	922 aa		4.83	□□□□□ -1.64
YPK3	YBR028C	SRO77	P38163	1010 aa		4.83	□□□□□ -1.64
YPK3	YBR028C	LTP1	P40347	161 aa		4.83	□□□□□ -1.64
YPK3	YBR028C	CFD1	P40558	293 aa		4.83	□□□□□ -1.64
YPK3	YBR028C	PSA1	P41940	361 aa	Known RBP	4.83	□□□□□ -1.64
YPK3	YBR028C	UBP8	P50102	471 aa		4.83	□□□□□ -1.64
YPK3	YBR028C	EFM6	P53970	246 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms