RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W NEM1P38757 446 aa6.71□□□□□ -1.34
SWD1YAR003W LIN1P38852 340 aaPredicted RBP6.71□□□□□ -1.34
SWD1YAR003W YJL206CP39529 758 aa6.71□□□□□ -1.34
SWD1YAR003W BOL3P39724 118 aa6.71□□□□□ -1.34
SWD1YAR003W YFL012WP43580 148 aa6.71□□□□□ -1.34
SWD1YAR003W BUD13P46947 266 aaPredicted RBP6.71□□□□□ -1.34
SWD1YAR003W AIM23P47015 356 aa6.71□□□□□ -1.34
SWD1YAR003W LIA1P47120 325 aaKnown RBP6.71□□□□□ -1.34
SWD1YAR003W AMA1P50082 593 aa6.71□□□□□ -1.34
SWD1YAR003W PYK2P52489 506 aaKnown RBP6.71□□□□□ -1.34
SWD1YAR003W SUT1P53032 299 aaKnown RBP6.71□□□□□ -1.34
SWD1YAR003W AIM14P53109 570 aa6.71□□□□□ -1.34
SWD1YAR003W LSC1P53598 329 aaKnown RBP6.71□□□□□ -1.34
SWD1YAR003W ORC3P54790 616 aa6.71□□□□□ -1.34
SWD1YAR003W SLT2Q00772 484 aa6.71□□□□□ -1.34
SWD1YAR003W YDR109CQ04585 715 aa6.71□□□□□ -1.34
SWD1YAR003W CDC123Q05791 360 aa6.71□□□□□ -1.34
SWD1YAR003W YPR114WQ06107 315 aa6.71□□□□□ -1.34
SWD1YAR003W YLR046CQ12253 270 aa6.71□□□□□ -1.34
SWD1YAR003W MRP10O75012 95 aa6.7□□□□□ -1.34
SWD1YAR003W REV1P12689 985 aa6.7□□□□□ -1.34
SWD1YAR003W ACO1P19414 778 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
SWD1YAR003W CLN1P20437 546 aa6.7□□□□□ -1.34
SWD1YAR003W AAT2P23542 418 aaKnown RBP6.7□□□□□ -1.34
SWD1YAR003W MNE1P24720 663 aa6.7□□□□□ -1.34
SWD1YAR003W GEX1P25596 615 aa6.7□□□□□ -1.34
SWD1YAR003W IMP3P32899 183 aaPredicted RBP6.7□□□□□ -1.34
SWD1YAR003W LOS1P33418 1100 aaPredicted RBP6.7□□□□□ -1.34
SWD1YAR003W STE13P33894 931 aa6.7□□□□□ -1.34
SWD1YAR003W TOM20P35180 183 aa6.7□□□□□ -1.34
SWD1YAR003W RRP14P36080 434 aaKnown RBP6.7□□□□□ -1.34
SWD1YAR003W SET3P36124 751 aa6.7□□□□□ -1.34
SWD1YAR003W GEX2P36173 615 aa6.7□□□□□ -1.34
SWD1YAR003W VPS41P38959 992 aa6.7□□□□□ -1.34
SWD1YAR003W MEF2P39677 819 aa6.7□□□□□ -1.34
SWD1YAR003W SAP4P53036 818 aa6.7□□□□□ -1.34
SWD1YAR003W FLC3P53121 802 aa6.7□□□□□ -1.34
SWD1YAR003W SPC105P53148 917 aa6.7□□□□□ -1.34
SWD1YAR003W PEX8P53248 589 aa6.7□□□□□ -1.34
SWD1YAR003W BIO4P53630 237 aa6.7□□□□□ -1.34
SWD1YAR003W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
SWD1YAR003W NUP100Q02629 959 aa6.7□□□□□ -1.34
SWD1YAR003W TAF11Q04226 346 aa6.7□□□□□ -1.34
SWD1YAR003W SLP1Q12232 587 aa6.7□□□□□ -1.34
SWD1YAR003W KCS1Q12494 1050 aa6.7□□□□□ -1.34
SWD1YAR003W MPD2Q99316 277 aa6.7□□□□□ -1.34
SWD1YAR003W PMA2P19657 947 aa6.69□□□□□ -1.34
SWD1YAR003W AAD3P25612 363 aa6.69□□□□□ -1.34
SWD1YAR003W PPZ1P26570 692 aa6.69□□□□□ -1.34
SWD1YAR003W AEP1P32493 518 aa6.69□□□□□ -1.34
SWD1YAR003W CYM1P32898 989 aa6.69□□□□□ -1.34
SWD1YAR003W SRP101P32916 621 aa6.69□□□□□ -1.34
SWD1YAR003W SWE1P32944 819 aa6.69□□□□□ -1.34
SWD1YAR003W YHR131CP38835 850 aa6.69□□□□□ -1.34
SWD1YAR003W DUN1P39009 513 aa6.69□□□□□ -1.34
SWD1YAR003W NTA1P40354 457 aa6.69□□□□□ -1.34
SWD1YAR003W SEC28P40509 296 aaKnown RBP6.69□□□□□ -1.34
SWD1YAR003W ERG10P41338 398 aaKnown RBP6.69□□□□□ -1.34
SWD1YAR003W YJR124CP47159 448 aa6.69□□□□□ -1.34
SWD1YAR003W PPT1P53043 513 aa6.69□□□□□ -1.34
SWD1YAR003W GND2P53319 492 aa6.69□□□□□ -1.34
SWD1YAR003W PRM1P53835 661 aa6.69□□□□□ -1.34
SWD1YAR003W PPN1Q04119 674 aa6.69□□□□□ -1.34
SWD1YAR003W HPT1Q04178 221 aaKnown RBP6.69□□□□□ -1.34
SWD1YAR003W YLR177WQ06251 628 aa6.69□□□□□ -1.34
SWD1YAR003W EMG1Q06287 252 aaKnown RBP6.69□□□□□ -1.34
SWD1YAR003W NSE1Q07913 336 aa6.69□□□□□ -1.34
SWD1YAR003W TGL5Q12043 749 aa6.69□□□□□ -1.34
SWD1YAR003W YDR034W-BQ6Q5X2 51 aa6.69□□□□□ -1.34
SWD1YAR003W RGS2Q99188 309 aa6.69□□□□□ -1.34
SWD1YAR003W CET1O13297 549 aaPredicted RBP6.68□□□□□ -1.34
SWD1YAR003W SEM1O94742 89 aa6.68□□□□□ -1.34
SWD1YAR003W HIS5P07172 385 aa6.68□□□□□ -1.34
SWD1YAR003W NSP1P14907 823 aaKnown RBP6.68□□□□□ -1.34
SWD1YAR003W RPB10P22139 70 aa6.68□□□□□ -1.34
SWD1YAR003W AMD2P22580 549 aa6.68□□□□□ -1.34
SWD1YAR003W BEM1P29366 551 aa6.68□□□□□ -1.34
SWD1YAR003W MRE11P32829 692 aa6.68□□□□□ -1.34
SWD1YAR003W STE5P32917 917 aa6.68□□□□□ -1.34
SWD1YAR003W STB6P36085 766 aa6.68□□□□□ -1.34
SWD1YAR003W TAT1P38085 619 aa6.68□□□□□ -1.34
SWD1YAR003W AIM46P38885 310 aa6.68□□□□□ -1.34
SWD1YAR003W PEP8P40335 379 aa6.68□□□□□ -1.34
SWD1YAR003W PAN6P40459 309 aa6.68□□□□□ -1.34
SWD1YAR003W RCF2P53721 224 aa6.68□□□□□ -1.34
SWD1YAR003W IPI3P53877 555 aa6.68□□□□□ -1.34
SWD1YAR003W YNL143CP53908 130 aa6.68□□□□□ -1.34
SWD1YAR003W PIR1Q03178 341 aa6.68□□□□□ -1.34
SWD1YAR003W BUD22Q04347 519 aaKnown RBP6.68□□□□□ -1.34
SWD1YAR003W MCP2Q06567 569 aa6.68□□□□□ -1.34
SWD1YAR003W RSB1Q08417 382 aa6.68□□□□□ -1.34
SWD1YAR003W RPS14AP06367 137 aaKnown RBP6.67□□□□□ -1.34
SWD1YAR003W GCY1P14065 312 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
SWD1YAR003W RPB4P20433 221 aaPredicted RBP6.67□□□□□ -1.34
SWD1YAR003W CDC10P25342 322 aaKnown RBP6.67□□□□□ -1.34
SWD1YAR003W MSH2P25847 964 aa6.67□□□□□ -1.34
SWD1YAR003W PHA2P32452 334 aa6.67□□□□□ -1.34
SWD1YAR003W GDA1P32621 518 aa6.67□□□□□ -1.34
SWD1YAR003W YSW1P38280 609 aa6.67□□□□□ -1.34
SWD1YAR003W YHI9P38765 294 aa6.67□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms