RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W AAD3P25612 363 aa3.46□□□□□ -1.86
NUP60YAR002W MSH2P25847 964 aa3.46□□□□□ -1.86
NUP60YAR002W MVD1P32377 396 aaKnown RBP3.46□□□□□ -1.86
NUP60YAR002W MRE11P32829 692 aa3.46□□□□□ -1.86
NUP60YAR002W RAD5P32849 1169 aaPredicted RBP3.46□□□□□ -1.86
NUP60YAR002W LRG1P35688 1017 aa3.46□□□□□ -1.86
NUP60YAR002W SHE3P38272 425 aaKnown RBP3.46□□□□□ -1.86
NUP60YAR002W AIM18P38884 321 aa3.46□□□□□ -1.86
NUP60YAR002W OAF1P39720 1047 aaPredicted RBP3.46□□□□□ -1.86
NUP60YAR002W AFG3P39925 761 aa3.46□□□□□ -1.86
NUP60YAR002W ZRG8P40021 1076 aa3.46□□□□□ -1.86
NUP60YAR002W PSF2P40359 213 aa3.46□□□□□ -1.86
NUP60YAR002W PFK26P40433 827 aaKnown RBP3.46□□□□□ -1.86
NUP60YAR002W YJL107CP42947 387 aa3.46□□□□□ -1.86
NUP60YAR002W POL31P46957 487 aa3.46□□□□□ -1.86
NUP60YAR002W NCS6P53088 359 aa3.46□□□□□ -1.86
NUP60YAR002W DAM1P53267 343 aa3.46□□□□□ -1.86
NUP60YAR002W PBP1P53297 722 aaKnown RBP3.46□□□□□ -1.86
NUP60YAR002W YPR003CP53394 754 aa3.46□□□□□ -1.86
NUP60YAR002W BIO4P53630 237 aa3.46□□□□□ -1.86
NUP60YAR002W MRPL22P53881 309 aa3.46□□□□□ -1.86
NUP60YAR002W UBX4P54730 416 aa3.46□□□□□ -1.86
NUP60YAR002W STP1Q00947 519 aa3.46□□□□□ -1.86
NUP60YAR002W RCR2Q03446 210 aaKnown RBP3.46□□□□□ -1.86
NUP60YAR002W SKY1Q03656 742 aa3.46□□□□□ -1.86
NUP60YAR002W YMR160WQ03823 816 aa3.46□□□□□ -1.86
NUP60YAR002W BUD22Q04347 519 aaKnown RBP3.46□□□□□ -1.86
NUP60YAR002W YLR177WQ06251 628 aa3.46□□□□□ -1.86
NUP60YAR002W YET3Q07451 203 aa3.46□□□□□ -1.86
NUP60YAR002W APC5Q08683 685 aa3.46□□□□□ -1.86
NUP60YAR002W GAL80P04387 435 aa3.45□□□□□ -1.86
NUP60YAR002W RAD3P06839 778 aa3.45□□□□□ -1.86
NUP60YAR002W MPH2P0CD99 609 aa3.45□□□□□ -1.86
NUP60YAR002W ENA1P13587 1091 aa3.45□□□□□ -1.86
NUP60YAR002W RFA1P22336 621 aaKnown RBP3.45□□□□□ -1.86
NUP60YAR002W URA10P30402 227 aa3.45□□□□□ -1.86
NUP60YAR002W CSE2P33308 149 aa3.45□□□□□ -1.86
NUP60YAR002W COY1P34237 679 aa3.45□□□□□ -1.86
NUP60YAR002W KES1P35844 434 aaKnown RBP3.45□□□□□ -1.86
NUP60YAR002W TVP23P38962 199 aa3.45□□□□□ -1.86
NUP60YAR002W ERR3P42222 437 aa3.45□□□□□ -1.86
NUP60YAR002W RRT5P43607 289 aa3.45□□□□□ -1.86
NUP60YAR002W MNN11P46985 422 aaKnown RBP3.45□□□□□ -1.86
NUP60YAR002W IML2P47031 731 aa3.45□□□□□ -1.86
NUP60YAR002W PAN2P53010 1115 aaPredicted RBP3.45□□□□□ -1.86
NUP60YAR002W PEX31P53203 462 aa3.45□□□□□ -1.86
NUP60YAR002W YGR012WP53206 393 aa3.45□□□□□ -1.86
NUP60YAR002W SPC98P53540 846 aa3.45□□□□□ -1.86
NUP60YAR002W TEP1P53916 434 aa3.45□□□□□ -1.86
NUP60YAR002W VPS9P54787 451 aa3.45□□□□□ -1.86
NUP60YAR002W DOS2P54858 310 aa3.45□□□□□ -1.86
NUP60YAR002W ENA2Q01896 1091 aa3.45□□□□□ -1.86
NUP60YAR002W SND1Q04007 877 aa3.45□□□□□ -1.86
NUP60YAR002W YDL073WQ07454 984 aa3.45□□□□□ -1.86
NUP60YAR002W DDC1Q08949 612 aa3.45□□□□□ -1.86
NUP60YAR002W NBP2Q12163 236 aa3.45□□□□□ -1.86
NUP60YAR002W MDM20Q12387 796 aaKnown RBP3.45□□□□□ -1.86
NUP60YAR002W SPE4Q12455 300 aa3.45□□□□□ -1.86
NUP60YAR002W ENA5Q12691 1091 aa3.45□□□□□ -1.86
NUP60YAR002W YPT6Q99260 215 aa3.45□□□□□ -1.86
NUP60YAR002W AI5_ALPHAQ9ZZX1 630 aa3.45□□□□□ -1.86
NUP60YAR002W PAB1P04147 577 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
NUP60YAR002W RPP2AP05319 106 aaKnown RBP3.44□□□□□ -1.86
NUP60YAR002W GID7P25569 745 aa3.44□□□□□ -1.86
NUP60YAR002W FUB1P25659 250 aa3.44□□□□□ -1.86
NUP60YAR002W RPC19P28000 142 aaKnown RBP3.44□□□□□ -1.86
NUP60YAR002W TOA1P32773 286 aa3.44□□□□□ -1.86
NUP60YAR002W SRP101P32916 621 aa3.44□□□□□ -1.86
NUP60YAR002W TKL2P33315 681 aa3.44□□□□□ -1.86
NUP60YAR002W STE13P33894 931 aa3.44□□□□□ -1.86
NUP60YAR002W EMC3P36039 253 aa3.44□□□□□ -1.86
NUP60YAR002W MRPL7P36519 292 aa3.44□□□□□ -1.86
NUP60YAR002W YBR053CP38235 358 aa3.44□□□□□ -1.86
NUP60YAR002W BIT2P38346 545 aa3.44□□□□□ -1.86
NUP60YAR002W RFC3P38629 340 aa3.44□□□□□ -1.86
NUP60YAR002W PPE1P38796 400 aa3.44□□□□□ -1.86
NUP60YAR002W LAM1P38851 1228 aa3.44□□□□□ -1.86
NUP60YAR002W SSP120P39931 234 aaKnown RBP3.44□□□□□ -1.86
NUP60YAR002W STL1P39932 569 aa3.44□□□□□ -1.86
NUP60YAR002W ESL1P40456 1118 aa3.44□□□□□ -1.86
NUP60YAR002W MAF1P41910 395 aa3.44□□□□□ -1.86
NUP60YAR002W YFL012WP43580 148 aa3.44□□□□□ -1.86
NUP60YAR002W RAI1P53063 387 aaKnown RBP3.44□□□□□ -1.86
NUP60YAR002W NNF2P53253 936 aa3.44□□□□□ -1.86
NUP60YAR002W YGR127WP53275 312 aa3.44□□□□□ -1.86
NUP60YAR002W KTR6P54070 446 aa3.44□□□□□ -1.86
NUP60YAR002W INA17Q02888 182 aa3.44□□□□□ -1.86
NUP60YAR002W UGO1Q03327 502 aa3.44□□□□□ -1.86
NUP60YAR002W AAD4Q07747 329 aa3.44□□□□□ -1.86
NUP60YAR002W ESC8Q08119 714 aa3.44□□□□□ -1.86
NUP60YAR002W NRT1Q08485 598 aa3.44□□□□□ -1.86
NUP60YAR002W OSW1Q08692 278 aa3.44□□□□□ -1.86
NUP60YAR002W ENV7Q12003 364 aa3.44□□□□□ -1.86
NUP60YAR002W GPM2Q12008 311 aa3.44□□□□□ -1.86
NUP60YAR002W HOS1Q12214 470 aa3.44□□□□□ -1.86
NUP60YAR002W EFG1Q3E705 233 aaKnown RBP3.44□□□□□ -1.86
NUP60YAR002W PWP1P21304 576 aaKnown RBP3.44□□□□□ -1.86
NUP60YAR002W PMI40P29952 429 aaKnown RBP3.44□□□□□ -1.86
NUP60YAR002W SSE1P32589 693 aaKnown RBP3.44□□□□□ -1.86
NUP60YAR002W CYM1P32898 989 aa3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 111.8 ms