RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	PCL8	Q08966	492 aa		5.21	□□□□□ -1.58
ECM1	YAL059W	MLH3	Q12083	715 aa		5.21	□□□□□ -1.58
ECM1	YAL059W	MRH1	Q12117	320 aa	Predicted RBP	5.21	□□□□□ -1.58
ECM1	YAL059W	LYS21	Q12122	440 aa	Known RBP	5.21	□□□□□ -1.58
ECM1	YAL059W	USV1	Q12132	391 aa		5.21	□□□□□ -1.58
ECM1	YAL059W	RPN5	Q12250	445 aa	Known RBP	5.21	□□□□□ -1.58
ECM1	YAL059W	POM34	Q12445	299 aa		5.21	□□□□□ -1.58
ECM1	YAL059W	AFI1	Q99222	893 aa		5.21	□□□□□ -1.58
ECM1	YAL059W	CET1	O13297	549 aa	Predicted RBP	5.2	□□□□□ -1.58
ECM1	YAL059W	URA3	P03962	267 aa		5.2	□□□□□ -1.58
ECM1	YAL059W	IME1	P21190	360 aa		5.2	□□□□□ -1.58
ECM1	YAL059W	FEN2	P25621	512 aa	Known RBP	5.2	□□□□□ -1.58
ECM1	YAL059W	ERV1	P27882	189 aa		5.2	□□□□□ -1.58
ECM1	YAL059W	YPT7	P32939	208 aa		5.2	□□□□□ -1.58
ECM1	YAL059W	YUH1	P35127	236 aa		5.2	□□□□□ -1.58
ECM1	YAL059W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
ECM1	YAL059W	MRPL40	P36534	297 aa		5.2	□□□□□ -1.58
ECM1	YAL059W	ADH5	P38113	351 aa	Known RBP	5.2	□□□□□ -1.58
ECM1	YAL059W	ARB1	P40024	610 aa	Known RBP	5.2	□□□□□ -1.58
ECM1	YAL059W	PIG2	P40187	538 aa		5.2	□□□□□ -1.58
ECM1	YAL059W	NDC80	P40460	691 aa		5.2	□□□□□ -1.58
ECM1	YAL059W	BIT61	P47041	543 aa		5.2	□□□□□ -1.58
ECM1	YAL059W	GLO1	P50107	326 aa		5.2	□□□□□ -1.58
ECM1	YAL059W	YGR266W	P53326	701 aa		5.2	□□□□□ -1.58
ECM1	YAL059W	SQS1	P53866	767 aa	Known RBP	5.2	□□□□□ -1.58
ECM1	YAL059W	REG1	Q00816	1014 aa		5.2	□□□□□ -1.58
ECM1	YAL059W	NOP6	Q07623	225 aa	Known RBP	5.2	□□□□□ -1.58
ECM1	YAL059W	CHS5	Q12114	671 aa	Known RBP	5.2	□□□□□ -1.58
ECM1	YAL059W	CTF3	Q12748	733 aa		5.2	□□□□□ -1.58
ECM1	YAL059W	RPB2	P08518	1224 aa	Known RBP	5.19	□□□□□ -1.58
ECM1	YAL059W	EST1	P17214	699 aa	Predicted RBP	5.19	□□□□□ -1.58
ECM1	YAL059W	DBP3	P20447	523 aa	Known RBP	5.19	□□□□□ -1.58
ECM1	YAL059W	CWH43	P25618	953 aa		5.19	□□□□□ -1.58
ECM1	YAL059W	MRP4	P32902	394 aa		5.19	□□□□□ -1.58
ECM1	YAL059W	COS111	P38308	924 aa		5.19	□□□□□ -1.58
ECM1	YAL059W	MRX1	P40050	688 aa		5.19	□□□□□ -1.58
ECM1	YAL059W	RGI2	P40188	164 aa		5.19	□□□□□ -1.58
ECM1	YAL059W	YIL077C	P40508	320 aa		5.19	□□□□□ -1.58
ECM1	YAL059W	DOT5	P40553	215 aa		5.19	□□□□□ -1.58
ECM1	YAL059W	BUD8	P41698	603 aa		5.19	□□□□□ -1.58
ECM1	YAL059W	ROK1	P45818	564 aa	Predicted RBP	5.19	□□□□□ -1.58
ECM1	YAL059W	MDR1	P53258	950 aa		5.19	□□□□□ -1.58
ECM1	YAL059W	LSB1	P53281	241 aa		5.19	□□□□□ -1.58
ECM1	YAL059W	STP4	Q07351	490 aa		5.19	□□□□□ -1.58
ECM1	YAL059W	RPS9B	P05755	195 aa	Known RBP	5.18	□□□□□ -1.58
ECM1	YAL059W	GAL7	P08431	366 aa		5.18	□□□□□ -1.58
ECM1	YAL059W	TY2A-LR1	P0C2J4	438 aa		5.18	□□□□□ -1.58
ECM1	YAL059W	TY2A-F	P0CX61	438 aa		5.18	□□□□□ -1.58
ECM1	YAL059W	TY2A-GR2	P0CX62	438 aa		5.18	□□□□□ -1.58
ECM1	YAL059W	BIK1	P11709	440 aa		5.18	□□□□□ -1.58
ECM1	YAL059W	PUT4	P15380	627 aa		5.18	□□□□□ -1.58
ECM1	YAL059W	KIN82	P25341	720 aa		5.18	□□□□□ -1.58
ECM1	YAL059W	TY2A-C	P25383	438 aa		5.18	□□□□□ -1.58
ECM1	YAL059W	PHO91	P27514	894 aa		5.18	□□□□□ -1.58
ECM1	YAL059W	SRB2	P34162	210 aa		5.18	□□□□□ -1.58
ECM1	YAL059W	KTR3	P38130	404 aa	Predicted RBP	5.18	□□□□□ -1.58
ECM1	YAL059W	UBP13	P38187	747 aa		5.18	□□□□□ -1.58
ECM1	YAL059W	VID24	P38263	362 aa		5.18	□□□□□ -1.58
ECM1	YAL059W	RFX1	P48743	811 aa		5.18	□□□□□ -1.58
ECM1	YAL059W	LSC1	P53598	329 aa	Known RBP	5.18	□□□□□ -1.58
ECM1	YAL059W	PDR16	P53860	351 aa	Known RBP	5.18	□□□□□ -1.58
ECM1	YAL059W	TY2A-DR2	Q03483	438 aa		5.18	□□□□□ -1.58
ECM1	YAL059W	ROY1	Q04847	553 aa		5.18	□□□□□ -1.58
ECM1	YAL059W	TY2A-B	Q12260	438 aa		5.18	□□□□□ -1.58
ECM1	YAL059W	TY2A-OR2	Q12293	438 aa		5.18	□□□□□ -1.58
ECM1	YAL059W	TY2A-DR1	Q12392	438 aa		5.18	□□□□□ -1.58
ECM1	YAL059W	TY2A-OR1	Q12439	438 aa		5.18	□□□□□ -1.58
ECM1	YAL059W	TY2A-DR3	Q99303	438 aa		5.18	□□□□□ -1.58
ECM1	YAL059W	RPB4	P20433	221 aa	Predicted RBP	5.17	□□□□□ -1.58
ECM1	YAL059W	KIN3	P22209	435 aa		5.17	□□□□□ -1.58
ECM1	YAL059W	SEC15	P22224	910 aa		5.17	□□□□□ -1.58
ECM1	YAL059W	ARG1	P22768	420 aa		5.17	□□□□□ -1.58
ECM1	YAL059W	SMY1	P32364	656 aa	Known RBP	5.17	□□□□□ -1.58
ECM1	YAL059W	ARC19	P33204	171 aa	Known RBP	5.17	□□□□□ -1.58
ECM1	YAL059W	WSS1	P38838	269 aa		5.17	□□□□□ -1.58
ECM1	YAL059W	YDR089W	P38966	869 aa		5.17	□□□□□ -1.58
ECM1	YAL059W	ARG2	P40360	574 aa		5.17	□□□□□ -1.58
ECM1	YAL059W	YIL089W	P40500	205 aa		5.17	□□□□□ -1.58
ECM1	YAL059W	QRI1	P43123	477 aa	Known RBP	5.17	□□□□□ -1.58
ECM1	YAL059W	LYS4	P49367	693 aa	Predicted RBP	5.17	□□□□□ -1.58
ECM1	YAL059W	VPS4	P52917	437 aa		5.17	□□□□□ -1.58
ECM1	YAL059W	CUE3	P53137	624 aa	Known RBP	5.17	□□□□□ -1.58
ECM1	YAL059W	ATG4	P53867	494 aa		5.17	□□□□□ -1.58
ECM1	YAL059W	NUS1	Q12063	375 aa		5.17	□□□□□ -1.58
ECM1	YAL059W	YJR112W-A	Q3E743	109 aa		5.17	□□□□□ -1.58
ECM1	YAL059W	ERG8	P24521	451 aa		5.16	□□□□□ -1.58
ECM1	YAL059W	DMC1	P25453	334 aa		5.16	□□□□□ -1.58
ECM1	YAL059W	ALY1	P36117	915 aa		5.16	□□□□□ -1.58
ECM1	YAL059W	YSW1	P38280	609 aa		5.16	□□□□□ -1.58
ECM1	YAL059W	DED81	P38707	554 aa	Known RBP	5.16	□□□□□ -1.58
ECM1	YAL059W	YJL206C	P39529	758 aa		5.16	□□□□□ -1.58
ECM1	YAL059W	YER034W	P40022	185 aa	Known RBP	5.16	□□□□□ -1.58
ECM1	YAL059W	MET28	P40573	187 aa		5.16	□□□□□ -1.58
ECM1	YAL059W	PXA1	P41909	870 aa		5.16	□□□□□ -1.58
ECM1	YAL059W	ZAP1	P47043	880 aa		5.16	□□□□□ -1.58
ECM1	YAL059W	MPS3	P47069	682 aa		5.16	□□□□□ -1.58
ECM1	YAL059W	RAD17	P48581	401 aa		5.16	□□□□□ -1.58
ECM1	YAL059W	TAF4	P50105	388 aa		5.16	□□□□□ -1.58
ECM1	YAL059W	ALT2	P52892	507 aa		5.16	□□□□□ -1.58
ECM1	YAL059W	PEF1	P53238	335 aa		5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 63.6 ms