RNA–Protein interactions for RNA: YAL016W

TPD3, Transcript of Regulatory subunit A of the heterotrimeric PP2A complex, yeastyeast

Gene TPD3, Length 1,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPD3YAL016W VMA16P23968 213 aa3.93□□□□□ -1.78
TPD3YAL016W LOT5P34234 306 aa3.93□□□□□ -1.78
TPD3YAL016W TCD2P36101 447 aaKnown RBP3.93□□□□□ -1.78
TPD3YAL016W RPF2P36160 344 aaKnown RBP3.93□□□□□ -1.78
TPD3YAL016W YNG2P38806 282 aaKnown RBP3.93□□□□□ -1.78
TPD3YAL016W PMT6P42934 759 aa3.93□□□□□ -1.78
TPD3YAL016W TCB2P48231 1178 aa3.93□□□□□ -1.78
TPD3YAL016W IMD4P50094 524 aaKnown RBP3.93□□□□□ -1.78
TPD3YAL016W YLR040CQ07988 224 aa3.93□□□□□ -1.78
TPD3YAL016W BAG7Q12128 409 aa3.93□□□□□ -1.78
TPD3YAL016W NFI1Q12216 726 aa3.93□□□□□ -1.78
TPD3YAL016W RLM1Q12224 676 aa3.93□□□□□ -1.78
TPD3YAL016W LCB4Q12246 624 aa3.93□□□□□ -1.78
TPD3YAL016W AVL9Q12500 764 aa3.93□□□□□ -1.78
TPD3YAL016W PMA1P05030 918 aaKnown RBP3.93□□□□□ -1.78
TPD3YAL016W CHO2P05374 869 aaKnown RBP3.93□□□□□ -1.78
TPD3YAL016W MDH1P17505 334 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
TPD3YAL016W LAC1P28496 418 aa3.93□□□□□ -1.78
TPD3YAL016W PAP1P29468 568 aaKnown RBP3.93□□□□□ -1.78
TPD3YAL016W WBP1P33767 430 aaKnown RBP3.93□□□□□ -1.78
TPD3YAL016W POP2P39008 433 aa3.93□□□□□ -1.78
TPD3YAL016W MAM1P40065 302 aa3.93□□□□□ -1.78
TPD3YAL016W EFM4P40516 257 aa3.93□□□□□ -1.78
TPD3YAL016W VID30P53076 958 aa3.93□□□□□ -1.78
TPD3YAL016W ATG4P53867 494 aa3.93□□□□□ -1.78
TPD3YAL016W RNT1Q02555 471 aa3.93□□□□□ -1.78
TPD3YAL016W GPM3Q12326 303 aa3.93□□□□□ -1.78
TPD3YAL016W KGD1P20967 1014 aaKnown RBP3.92□□□□□ -1.78
TPD3YAL016W RNR3P21672 869 aaKnown RBP3.92□□□□□ -1.78
TPD3YAL016W HRR25P29295 494 aaKnown RBP3.92□□□□□ -1.78
TPD3YAL016W SYN8P31377 255 aa3.92□□□□□ -1.78
TPD3YAL016W TIF3P34167 436 aaKnown RBP3.92□□□□□ -1.78
TPD3YAL016W CMC1P36064 111 aa3.92□□□□□ -1.78
TPD3YAL016W DCP2P53550 970 aaKnown RBP3.92□□□□□ -1.78
TPD3YAL016W IPI3P53877 555 aa3.92□□□□□ -1.78
TPD3YAL016W MAK10Q02197 733 aa3.92□□□□□ -1.78
TPD3YAL016W RSM28Q03430 361 aa3.92□□□□□ -1.78
TPD3YAL016W PRP42Q03776 544 aaKnown RBP3.92□□□□□ -1.78
TPD3YAL016W RQC1Q05468 723 aaKnown RBP3.92□□□□□ -1.78
TPD3YAL016W CRT10Q08226 957 aa3.92□□□□□ -1.78
TPD3YAL016W FMP40Q08968 688 aaPredicted RBP3.92□□□□□ -1.78
TPD3YAL016W NTO1Q12311 748 aa3.92□□□□□ -1.78
TPD3YAL016W FRE6Q12473 712 aa3.92□□□□□ -1.78
TPD3YAL016W PPR1P07272 904 aaPredicted RBP3.91□□□□□ -1.78
TPD3YAL016W MRP13P12686 339 aa3.91□□□□□ -1.78
TPD3YAL016W PRP6P19735 899 aaPredicted RBP3.91□□□□□ -1.78
TPD3YAL016W REC107P21651 314 aa3.91□□□□□ -1.78
TPD3YAL016W MGM1P32266 881 aa3.91□□□□□ -1.78
TPD3YAL016W SEF1P34228 1148 aa3.91□□□□□ -1.78
TPD3YAL016W CAB3P36076 571 aa3.91□□□□□ -1.78
TPD3YAL016W AAP1P37898 856 aaKnown RBP3.91□□□□□ -1.78
TPD3YAL016W OTU2P38747 307 aaKnown RBP3.91□□□□□ -1.78
TPD3YAL016W SAP1P39955 897 aaKnown RBP3.91□□□□□ -1.78
TPD3YAL016W TWF1P53250 332 aa3.91□□□□□ -1.78
TPD3YAL016W YDR179W-AQ03983 463 aa3.91□□□□□ -1.78
TPD3YAL016W PCL8Q08966 492 aa3.91□□□□□ -1.78
TPD3YAL016W YLR358CO13565 187 aa3.91□□□□□ -1.78
TPD3YAL016W MF(ALPHA)1P01149 165 aa3.91□□□□□ -1.78
TPD3YAL016W RPL3P14126 387 aaKnown RBP3.91□□□□□ -1.78
TPD3YAL016W PDA1P16387 420 aaKnown RBP3.91□□□□□ -1.78
TPD3YAL016W RRP43P25359 394 aaPredicted RBP3.91□□□□□ -1.78
TPD3YAL016W MRE11P32829 692 aa3.91□□□□□ -1.78
TPD3YAL016W SUL1P38359 859 aa3.91□□□□□ -1.78
TPD3YAL016W SEC31P38968 1273 aaKnown RBP3.91□□□□□ -1.78
TPD3YAL016W VMA13P41807 478 aaKnown RBP3.91□□□□□ -1.78
TPD3YAL016W MPP10P47083 593 aaKnown RBP3.91□□□□□ -1.78
TPD3YAL016W RSF1Q05043 376 aa3.91□□□□□ -1.78
TPD3YAL016W RBS1Q05672 457 aaKnown RBP3.91□□□□□ -1.78
TPD3YAL016W YDL073WQ07454 984 aa3.91□□□□□ -1.78
TPD3YAL016W YOL159CQ08300 171 aa3.91□□□□□ -1.78
TPD3YAL016W BMS1Q08965 1183 aaKnown RBP3.91□□□□□ -1.78
TPD3YAL016W SPE3Q12074 293 aaKnown RBP3.91□□□□□ -1.78
TPD3YAL016W YML133CQ03099 1374 aa3.91□□□□□ -1.78
TPD3YAL016W YLL067CQ07888 1374 aa3.91□□□□□ -1.78
TPD3YAL016W YLL066CQ99208 1374 aa3.91□□□□□ -1.78
TPD3YAL016W TPK2P06245 380 aa3.9□□□□□ -1.78
TPD3YAL016W CPR2P23285 205 aa3.9□□□□□ -1.78
TPD3YAL016W BUD14P27637 709 aa3.9□□□□□ -1.78
TPD3YAL016W BRF1P29056 596 aa3.9□□□□□ -1.78
TPD3YAL016W PUP2P32379 260 aa3.9□□□□□ -1.78
TPD3YAL016W TFB1P32776 642 aa3.9□□□□□ -1.78
TPD3YAL016W CBR1P38626 284 aaKnown RBP3.9□□□□□ -1.78
TPD3YAL016W ALG5P40350 334 aa3.9□□□□□ -1.78
TPD3YAL016W HXT14P42833 540 aa3.9□□□□□ -1.78
TPD3YAL016W BUD27P43573 796 aaKnown RBP RIP-Chip data3.9□□□□□ -1.78not detected
TPD3YAL016W YFR020WP43600 232 aa3.9□□□□□ -1.78
TPD3YAL016W SAE2P46946 345 aa3.9□□□□□ -1.78
TPD3YAL016W DIA3P52290 468 aa3.9□□□□□ -1.78
TPD3YAL016W CUL3P53202 744 aa3.9□□□□□ -1.78
TPD3YAL016W COG2P53271 262 aa3.9□□□□□ -1.78
TPD3YAL016W YPL107WQ02873 248 aa3.9□□□□□ -1.78
TPD3YAL016W RAD33Q04231 177 aa3.9□□□□□ -1.78
TPD3YAL016W ARG7Q04728 441 aa3.9□□□□□ -1.78
TPD3YAL016W AIM39Q08223 395 aa3.9□□□□□ -1.78
TPD3YAL016W YPL191CQ08930 360 aa3.9□□□□□ -1.78
TPD3YAL016W KEL3Q08979 651 aaPredicted RBP3.9□□□□□ -1.78
TPD3YAL016W ATG9Q12142 997 aa3.9□□□□□ -1.78
TPD3YAL016W HXK2P04807 486 aaKnown RBP3.89□□□□□ -1.79
TPD3YAL016W HXT3P32466 567 aaKnown RBP3.89□□□□□ -1.79
TPD3YAL016W SSE2P32590 693 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms