RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 FLC1Q08967 793 aa-0.63□□□□□ -2.51
snR53snR53 YLR049CQ12110 428 aa-0.63□□□□□ -2.51
snR53snR53 HHF1P02309 103 aaKnown RBP-0.64□□□□□ -2.51
snR53snR53 YCK1P23291 538 aa-0.64□□□□□ -2.51
snR53snR53 SHP1P34223 423 aa-0.64□□□□□ -2.51
snR53snR53 TUL1P36096 758 aa-0.64□□□□□ -2.51
snR53snR53 DSS1P39112 969 aa-0.64□□□□□ -2.51
snR53snR53 FPR4Q06205 392 aaPredicted RBP-0.64□□□□□ -2.51
snR53snR53 FMP45Q07651 309 aa-0.64□□□□□ -2.51
snR53snR53 ERV2Q12284 196 aa-0.64□□□□□ -2.51
snR53snR53 MRP2P10663 115 aaPredicted RBP-0.65□□□□□ -2.51
snR53snR53 GSY1P23337 708 aa-0.65□□□□□ -2.51
snR53snR53 CDC60P26637 1090 aaKnown RBP-0.65□□□□□ -2.51
snR53snR53 STV1P37296 890 aa-0.65□□□□□ -2.51
snR53snR53 YHR020WP38708 688 aaKnown RBP-0.65□□□□□ -2.51
snR53snR53 TMA108P40462 946 aa-0.65□□□□□ -2.51
snR53snR53 IRC15Q02733 499 aa-0.65□□□□□ -2.51
snR53snR53 VHS1Q03785 461 aa-0.65□□□□□ -2.51
snR53snR53 RBA50Q04418 439 aa-0.65□□□□□ -2.51
snR53snR53 YLR455WQ06188 304 aa-0.65□□□□□ -2.51
snR53snR53 TY1B-AO13527 1196 aaKnown RBP-0.66□□□□□ -2.52
snR53snR53 MRC1P25588 1096 aa-0.66□□□□□ -2.52
snR53snR53 PCM1P38628 557 aaKnown RBP-0.66□□□□□ -2.52
snR53snR53 INP53Q12271 1107 aa-0.66□□□□□ -2.52
snR53snR53 ARP6Q12509 438 aa-0.66□□□□□ -2.52
snR53snR53 SUI3P09064 285 aaKnown RBP-0.67□□□□□ -2.52
snR53snR53 MAS2P11914 482 aa-0.67□□□□□ -2.52
snR53snR53 RPB8P20436 146 aa-0.67□□□□□ -2.52
snR53snR53 LAC1P28496 418 aa-0.67□□□□□ -2.52
snR53snR53 SAC6P32599 642 aaKnown RBP-0.67□□□□□ -2.52
snR53snR53 BUD16P39988 312 aa-0.67□□□□□ -2.52
snR53snR53 RGI2P40188 164 aa-0.67□□□□□ -2.52
snR53snR53 NPA3P47122 385 aa-0.67□□□□□ -2.52
snR53snR53 YRB30P53107 440 aaPredicted RBP-0.67□□□□□ -2.52
snR53snR53 MDM12Q92328 271 aa-0.67□□□□□ -2.52
snR53snR53 ACH1P32316 526 aa-0.68□□□□□ -2.52
snR53snR53 NMD2P38798 1089 aaKnown RBP-0.68□□□□□ -2.52
snR53snR53 YIL067CP40514 678 aa-0.68□□□□□ -2.52
snR53snR53 MDR1P53258 950 aa-0.68□□□□□ -2.52
snR53snR53 NUP100Q02629 959 aa-0.68□□□□□ -2.52
snR53snR53 YDL218WQ07629 317 aa-0.68□□□□□ -2.52
snR53snR53 CDC45Q08032 650 aa-0.68□□□□□ -2.52
snR53snR53 PCL2P25693 308 aa-0.69□□□□□ -2.52
snR53snR53 MF(ALPHA)2P32435 120 aa-0.69□□□□□ -2.52
snR53snR53 YME2P32843 850 aa-0.69□□□□□ -2.52
snR53snR53 PTK1P36002 662 aaPredicted RBP-0.69□□□□□ -2.52
snR53snR53 SPC34P36131 295 aa-0.69□□□□□ -2.52
snR53snR53 RFC1P38630 861 aaKnown RBP-0.69□□□□□ -2.52
snR53snR53 IDS2P46958 469 aa-0.69□□□□□ -2.52
snR53snR53 WRS1Q12109 432 aaKnown RBP-0.69□□□□□ -2.52
snR53snR53 SPO7P18410 259 aa-0.7□□□□□ -2.52
snR53snR53 MEF1P25039 761 aa-0.7□□□□□ -2.52
snR53snR53 STE50P25344 346 aa-0.7□□□□□ -2.52
snR53snR53 CBF2P32504 956 aa-0.7□□□□□ -2.52
snR53snR53 PMU1P36069 295 aa-0.7□□□□□ -2.52
snR53snR53 PHD1P36093 366 aa-0.7□□□□□ -2.52
snR53snR53 TIM17P39515 158 aa-0.7□□□□□ -2.52
snR53snR53 SEO1P39709 593 aa-0.7□□□□□ -2.52
snR53snR53 PEA2P40091 420 aa-0.7□□□□□ -2.52
snR53snR53 RRN11Q04712 507 aa-0.7□□□□□ -2.52
snR53snR53 ENT4Q07872 247 aa-0.7□□□□□ -2.52
snR53snR53 COX1P00401 534 aa-0.71□□□□□ -2.52
snR53snR53 SFL1P20134 766 aa-0.71□□□□□ -2.52
snR53snR53 SEC65P29478 273 aa-0.71□□□□□ -2.52
snR53snR53 SIP2P34164 415 aaKnown RBP-0.71□□□□□ -2.52
snR53snR53 NPR2P39923 615 aa-0.71□□□□□ -2.52
snR53snR53 VID28P40547 921 aa-0.71□□□□□ -2.52
snR53snR53 REE1P40893 198 aa-0.71□□□□□ -2.52
snR53snR53 NBP1P52919 319 aaPredicted RBP-0.71□□□□□ -2.52
snR53snR53 YNL034WP53963 612 aa-0.71□□□□□ -2.52
snR53snR53 MSS11Q03825 758 aa-0.71□□□□□ -2.52
snR53snR53 AIM32Q04689 311 aa-0.71□□□□□ -2.52
snR53snR53 CRF1Q04930 467 aa-0.71□□□□□ -2.52
snR53snR53 CDC26P14724 124 aa-0.72□□□□□ -2.52
snR53snR53 MCM4P30665 933 aaKnown RBP-0.72□□□□□ -2.52
snR53snR53 PIM1P36775 1133 aa-0.72□□□□□ -2.52
snR53snR53 DUG2P38149 878 aa-0.72□□□□□ -2.52
snR53snR53 PEF1P53238 335 aa-0.72□□□□□ -2.52
snR53snR53 PFA5Q03289 374 aa-0.72□□□□□ -2.52
snR53snR53 ATR1P13090 542 aa-0.73□□□□□ -2.53
snR53snR53 CPR1P14832 162 aaKnown RBP-0.73□□□□□ -2.53
snR53snR53 AEP2P22136 580 aa-0.73□□□□□ -2.53
snR53snR53 DGR2P32330 852 aa-0.73□□□□□ -2.53
snR53snR53 YNK1P36010 153 aaKnown RBP-0.73□□□□□ -2.53
snR53snR53 MRPS9P38120 278 aa-0.73□□□□□ -2.53
snR53snR53 TDA3P38758 523 aa-0.73□□□□□ -2.53
snR53snR53 RET2P43621 546 aa-0.73□□□□□ -2.53
snR53snR53 YGL082WP53155 381 aa-0.73□□□□□ -2.53
snR53snR53 YDR109CQ04585 715 aa-0.73□□□□□ -2.53
snR53snR53 SSF2Q12153 453 aaPredicted RBP-0.73□□□□□ -2.53
snR53snR53 RPS21BQ3E754 87 aaKnown RBP-0.73□□□□□ -2.53
snR53snR53 NAM2P11325 894 aa-0.74□□□□□ -2.53
snR53snR53 PET123P17558 318 aa-0.74□□□□□ -2.53
snR53snR53 PRE2P30656 287 aaKnown RBP-0.74□□□□□ -2.53
snR53snR53 EMP65P40085 556 aa-0.74□□□□□ -2.53
snR53snR53 FLC3P53121 802 aa-0.74□□□□□ -2.53
snR53snR53 BSC5P53755 489 aa-0.74□□□□□ -2.53
snR53snR53 SEC62P21825 274 aa-0.75□□□□□ -2.53
snR53snR53 TKL1P23254 680 aaKnown RBP-0.75□□□□□ -2.53
snR53snR53 FUN12P39730 1002 aaKnown RBP-0.75□□□□□ -2.53
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms