RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W MVP1P40959 511 aaKnown RBP5.18□□□□□ -1.58
SSO1YPL232W ROK1P45818 564 aaPredicted RBP5.18□□□□□ -1.58
SSO1YPL232W TY4A-JP47023 414 aa5.18□□□□□ -1.58
SSO1YPL232W TIM13P53299 105 aa5.18□□□□□ -1.58
SSO1YPL232W FRE4P53746 719 aa5.18□□□□□ -1.58
SSO1YPL232W YNL247WP53852 767 aaKnown RBP5.18□□□□□ -1.58
SSO1YPL232W RRN11Q04712 507 aa5.18□□□□□ -1.58
SSO1YPL232W TGL5Q12043 749 aa5.18□□□□□ -1.58
SSO1YPL232W APC11Q12157 165 aa5.18□□□□□ -1.58
SSO1YPL232W SEY1Q99287 776 aa5.18□□□□□ -1.58
SSO1YPL232W FAS1P07149 2051 aaKnown RBP5.18□□□□□ -1.58
SSO1YPL232W DCC1P25559 380 aa5.17□□□□□ -1.58
SSO1YPL232W HXT3P32466 567 aaKnown RBP5.17□□□□□ -1.58
SSO1YPL232W YBR259WP38338 688 aa5.17□□□□□ -1.58
SSO1YPL232W YHR033WP38690 423 aa5.17□□□□□ -1.58
SSO1YPL232W HXT8P40886 569 aa5.17□□□□□ -1.58
SSO1YPL232W NNF2P53253 936 aa5.17□□□□□ -1.58
SSO1YPL232W ARE2P53629 642 aaKnown RBP5.17□□□□□ -1.58
SSO1YPL232W HST1P53685 503 aa5.17□□□□□ -1.58
SSO1YPL232W LDB18Q07887 179 aa5.17□□□□□ -1.58
SSO1YPL232W CMR1Q12510 522 aaKnown RBP5.17□□□□□ -1.58
SSO1YPL232W RPL7AP05737 244 aaKnown RBP5.16□□□□□ -1.58
SSO1YPL232W CPA1P07258 411 aaKnown RBP5.16□□□□□ -1.58
SSO1YPL232W BCY1P07278 416 aaKnown RBP5.16□□□□□ -1.58
SSO1YPL232W ILS1P09436 1072 aaKnown RBP5.16□□□□□ -1.58
SSO1YPL232W RPC31P17890 251 aa5.16□□□□□ -1.58
SSO1YPL232W ACO1P19414 778 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
SSO1YPL232W URA4P20051 364 aa5.16□□□□□ -1.58
SSO1YPL232W CLN1P20437 546 aa5.16□□□□□ -1.58
SSO1YPL232W YCL042WP25572 119 aa5.16□□□□□ -1.58
SSO1YPL232W IMG1P25626 169 aa5.16□□□□□ -1.58
SSO1YPL232W DOM34P33309 386 aa5.16□□□□□ -1.58
SSO1YPL232W TFA2P36145 328 aa5.16□□□□□ -1.58
SSO1YPL232W BDH2P39713 417 aa5.16□□□□□ -1.58
SSO1YPL232W TES1P41903 349 aaKnown RBP5.16□□□□□ -1.58
SSO1YPL232W RGD2P43556 714 aa5.16□□□□□ -1.58
SSO1YPL232W RFX1P48743 811 aa5.16□□□□□ -1.58
SSO1YPL232W YGR127WP53275 312 aa5.16□□□□□ -1.58
SSO1YPL232W GND2P53319 492 aa5.16□□□□□ -1.58
SSO1YPL232W ADE12P80210 433 aaKnown RBP5.16□□□□□ -1.58
SSO1YPL232W ARX1Q03862 593 aaKnown RBP5.16□□□□□ -1.58
SSO1YPL232W YDR132CQ03900 495 aa5.16□□□□□ -1.58
SSO1YPL232W RSF1Q05043 376 aa5.16□□□□□ -1.58
SSO1YPL232W TPO1Q07824 586 aa5.16□□□□□ -1.58
SSO1YPL232W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
SSO1YPL232W RPL7BQ12213 244 aaKnown RBP5.16□□□□□ -1.58
SSO1YPL232W COX6P00427 148 aa5.15□□□□□ -1.59
SSO1YPL232W GFA1P14742 717 aaKnown RBP5.15□□□□□ -1.59
SSO1YPL232W HOP1P20050 605 aa5.15□□□□□ -1.59
SSO1YPL232W GSY2P27472 705 aa5.15□□□□□ -1.59
SSO1YPL232W YEL073CP39974 107 aa5.15□□□□□ -1.59
SSO1YPL232W KHA1P40309 873 aa5.15□□□□□ -1.59
SSO1YPL232W ALA1P40825 983 aaKnown RBP5.15□□□□□ -1.59
SSO1YPL232W MMM1P41800 426 aa5.15□□□□□ -1.59
SSO1YPL232W ELP2P42935 788 aa5.15□□□□□ -1.59
SSO1YPL232W SRP1Q02821 542 aaKnown RBP5.15□□□□□ -1.59
SSO1YPL232W ROT1Q03691 256 aa5.15□□□□□ -1.59
SSO1YPL232W RRP45Q05636 305 aaKnown RBP5.15□□□□□ -1.59
SSO1YPL232W DIN7Q12086 430 aa5.15□□□□□ -1.59
SSO1YPL232W YLR149CQ99296 730 aa5.15□□□□□ -1.59
SSO1YPL232W MDM35O60200 86 aa5.14□□□□□ -1.59
SSO1YPL232W CYT1P07143 309 aa5.14□□□□□ -1.59
SSO1YPL232W VPS34P22543 875 aa5.14□□□□□ -1.59
SSO1YPL232W MCM2P29469 868 aa5.14□□□□□ -1.59
SSO1YPL232W GCD11P32481 527 aaKnown RBP5.14□□□□□ -1.59
SSO1YPL232W PET127P32606 800 aa5.14□□□□□ -1.59
SSO1YPL232W NTR2P36118 322 aaPredicted RBP5.14□□□□□ -1.59
SSO1YPL232W MRPL15P36523 253 aa5.14□□□□□ -1.59
SSO1YPL232W SHM1P37292 490 aaPredicted RBP5.14□□□□□ -1.59
SSO1YPL232W NCL1P38205 684 aaKnown RBP5.14□□□□□ -1.59
SSO1YPL232W OTU2P38747 307 aaKnown RBP5.14□□□□□ -1.59
SSO1YPL232W PCL5P38794 229 aa5.14□□□□□ -1.59
SSO1YPL232W YHR210CP38893 341 aa5.14□□□□□ -1.59
SSO1YPL232W YIL086CP40503 102 aa5.14□□□□□ -1.59
SSO1YPL232W YJR030CP47101 745 aa5.14□□□□□ -1.59
SSO1YPL232W SAP4P53036 818 aa5.14□□□□□ -1.59
SSO1YPL232W CDC14Q00684 551 aa5.14□□□□□ -1.59
SSO1YPL232W MCA1Q08601 432 aa5.14□□□□□ -1.59
SSO1YPL232W BUD7Q08754 746 aa5.14□□□□□ -1.59
SSO1YPL232W SEC23P15303 768 aaKnown RBP5.13□□□□□ -1.59
SSO1YPL232W VAC17P25591 423 aa5.13□□□□□ -1.59
SSO1YPL232W YCR015CP25616 317 aa5.13□□□□□ -1.59
SSO1YPL232W MSH1P25846 959 aa5.13□□□□□ -1.59
SSO1YPL232W GDA1P32621 518 aa5.13□□□□□ -1.59
SSO1YPL232W FTH1P38310 465 aa5.13□□□□□ -1.59
SSO1YPL232W YHR182WP38870 785 aa5.13□□□□□ -1.59
SSO1YPL232W YJL107CP42947 387 aa5.13□□□□□ -1.59
SSO1YPL232W ZRG17P53735 605 aa5.13□□□□□ -1.59
SSO1YPL232W RSC4Q02206 625 aa5.13□□□□□ -1.59
SSO1YPL232W CCE1Q03702 353 aa5.13□□□□□ -1.59
SSO1YPL232W GSF2Q04697 403 aaKnown RBP5.13□□□□□ -1.59
SSO1YPL232W RCO1Q04779 684 aa5.13□□□□□ -1.59
SSO1YPL232W IVY1Q04934 453 aa5.13□□□□□ -1.59
SSO1YPL232W ESC2Q06340 456 aa5.13□□□□□ -1.59
SSO1YPL232W REH1Q06709 432 aa5.13□□□□□ -1.59
SSO1YPL232W AAD15Q08361 143 aa5.13□□□□□ -1.59
SSO1YPL232W TMA16Q08687 178 aa5.13□□□□□ -1.59
SSO1YPL232W RPS6AP0CX37 236 aaKnown RBP5.12□□□□□ -1.59
SSO1YPL232W RPS6BP0CX38 236 aaPredicted RBP5.12□□□□□ -1.59
SSO1YPL232W FUR1P18562 216 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms