RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C CYK3Q07533 885 aa3.69□□□□□ -1.82
WHI3YNL197C HUA2Q12134 243 aa3.69□□□□□ -1.82
WHI3YNL197C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
WHI3YNL197C SUT2Q12286 268 aa3.69□□□□□ -1.82
WHI3YNL197C POL4P25615 582 aa3.69□□□□□ -1.82
WHI3YNL197C MRPL9P31334 269 aa3.69□□□□□ -1.82
WHI3YNL197C YMC1P32331 307 aa3.69□□□□□ -1.82
WHI3YNL197C AUR1P36107 401 aaPredicted RBP3.69□□□□□ -1.82
WHI3YNL197C KTR3P38130 404 aaPredicted RBP3.69□□□□□ -1.82
WHI3YNL197C SRO77P38163 1010 aa3.69□□□□□ -1.82
WHI3YNL197C RTS1P38903 757 aa3.69□□□□□ -1.82
WHI3YNL197C YEL057CP39983 233 aa3.69□□□□□ -1.82
WHI3YNL197C YLR287CQ05881 355 aa3.69□□□□□ -1.82
WHI3YNL197C AHA1Q12449 350 aaKnown RBP3.69□□□□□ -1.82
WHI3YNL197C HSH49Q99181 213 aaPredicted RBP3.69□□□□□ -1.82
WHI3YNL197C MET17P06106 444 aa3.68□□□□□ -1.82
WHI3YNL197C CKA1P15790 372 aa3.68□□□□□ -1.82
WHI3YNL197C ROX1P25042 368 aa3.68□□□□□ -1.82
WHI3YNL197C AAD3P25612 363 aa3.68□□□□□ -1.82
WHI3YNL197C YBL029WP38201 376 aa3.68□□□□□ -1.82
WHI3YNL197C LSM5P40089 93 aaKnown RBP3.68□□□□□ -1.82
WHI3YNL197C YRB30P53107 440 aaPredicted RBP3.68□□□□□ -1.82
WHI3YNL197C YBR085C-AO43137 85 aa3.67□□□□□ -1.82
WHI3YNL197C CBS1P14066 229 aa3.67□□□□□ -1.82
WHI3YNL197C PWP1P21304 576 aaKnown RBP3.67□□□□□ -1.82
WHI3YNL197C PGS1P25578 521 aa3.67□□□□□ -1.82
WHI3YNL197C PDB1P32473 366 aaKnown RBP3.67□□□□□ -1.82
WHI3YNL197C MNN2P38069 597 aa3.67□□□□□ -1.82
WHI3YNL197C MAL33P38157 468 aa3.67□□□□□ -1.82
WHI3YNL197C RGI2P40188 164 aa3.67□□□□□ -1.82
WHI3YNL197C RPN11P43588 306 aaKnown RBP3.67□□□□□ -1.82
WHI3YNL197C UBX6P47049 396 aa3.67□□□□□ -1.82
WHI3YNL197C GLO1P50107 326 aa3.67□□□□□ -1.82
WHI3YNL197C DCP2P53550 970 aaKnown RBP3.67□□□□□ -1.82
WHI3YNL197C ATG9Q12142 997 aa3.67□□□□□ -1.82
WHI3YNL197C RTC1Q08281 1341 aa3.67□□□□□ -1.82
WHI3YNL197C MAK32P23060 363 aa3.67□□□□□ -1.82
WHI3YNL197C PRE8P23639 250 aa3.67□□□□□ -1.82
WHI3YNL197C DMC1P25453 334 aa3.67□□□□□ -1.82
WHI3YNL197C UGP1P32861 499 aaKnown RBP3.67□□□□□ -1.82
WHI3YNL197C YNG2P38806 282 aaKnown RBP3.67□□□□□ -1.82
WHI3YNL197C SEC31P38968 1273 aaKnown RBP3.67□□□□□ -1.82
WHI3YNL197C CDC1P40986 491 aa3.67□□□□□ -1.82
WHI3YNL197C SAE2P46946 345 aa3.67□□□□□ -1.82
WHI3YNL197C LCL3P53153 274 aa3.67□□□□□ -1.82
WHI3YNL197C FCP1Q03254 732 aa3.67□□□□□ -1.82
WHI3YNL197C RSM28Q03430 361 aa3.67□□□□□ -1.82
WHI3YNL197C RPC11Q04307 110 aaPredicted RBP3.67□□□□□ -1.82
WHI3YNL197C ARP9Q05123 467 aa3.67□□□□□ -1.82
WHI3YNL197C YOL159CQ08300 171 aa3.67□□□□□ -1.82
WHI3YNL197C RCN2Q12044 265 aa3.67□□□□□ -1.82
WHI3YNL197C YPT6Q99260 215 aa3.67□□□□□ -1.82
WHI3YNL197C PET111P08468 800 aa3.66□□□□□ -1.82
WHI3YNL197C SAT4P25333 603 aaKnown RBP3.66□□□□□ -1.82
WHI3YNL197C PTC6P25646 442 aa3.66□□□□□ -1.82
WHI3YNL197C ECM10P39987 644 aa3.66□□□□□ -1.82
WHI3YNL197C MRK1P50873 501 aa3.66□□□□□ -1.82
WHI3YNL197C YPR003CP53394 754 aa3.66□□□□□ -1.82
WHI3YNL197C SPC19Q03954 165 aa3.66□□□□□ -1.82
WHI3YNL197C SYF1Q04048 859 aaPredicted RBP3.66□□□□□ -1.82
WHI3YNL197C RTT109Q07794 436 aa3.66□□□□□ -1.82
WHI3YNL197C YEH1Q07804 573 aa3.66□□□□□ -1.82
WHI3YNL197C LEA1Q08963 238 aaPredicted RBP3.66□□□□□ -1.82
WHI3YNL197C RRG1Q12167 365 aaPredicted RBP3.66□□□□□ -1.82
WHI3YNL197C GRX6Q12438 231 aa3.66□□□□□ -1.82
WHI3YNL197C RED1P14291 827 aa3.65□□□□□ -1.82
WHI3YNL197C GSY2P27472 705 aa3.65□□□□□ -1.82
WHI3YNL197C YEL020CP39994 560 aa3.65□□□□□ -1.82
WHI3YNL197C SGN1P40561 250 aaKnown RBP RIP-Chip data3.65□□□□□ -1.82not detected
WHI3YNL197C OPT1P40897 799 aa3.65□□□□□ -1.82
WHI3YNL197C YML037CQ03703 340 aa3.65□□□□□ -1.82
WHI3YNL197C SPN1Q06505 410 aaPredicted RBP3.65□□□□□ -1.82
WHI3YNL197C TCO89Q08921 799 aa3.65□□□□□ -1.82
WHI3YNL197C ULA1Q12059 462 aa3.65□□□□□ -1.82
WHI3YNL197C GET3Q12154 354 aaKnown RBP3.65□□□□□ -1.82
WHI3YNL197C YMR084WA2P2R3 262 aa3.65□□□□□ -1.83
WHI3YNL197C ARD1P07347 238 aaPredicted RBP3.65□□□□□ -1.83
WHI3YNL197C AQY1P0CD91 305 aa3.65□□□□□ -1.83
WHI3YNL197C LCB1P25045 558 aaKnown RBP3.65□□□□□ -1.83
WHI3YNL197C OCA4P25366 362 aa3.65□□□□□ -1.83
WHI3YNL197C ERV46P39727 415 aa3.65□□□□□ -1.83
WHI3YNL197C MET28P40573 187 aa3.65□□□□□ -1.83
WHI3YNL197C ARF3P40994 183 aaRIP-Chip data3.65□□□□□ -1.83not detected
WHI3YNL197C CIR1P42940 261 aa3.65□□□□□ -1.83
WHI3YNL197C JJJ1P53863 590 aa3.65□□□□□ -1.83
WHI3YNL197C BUD7Q08754 746 aa3.65□□□□□ -1.83
WHI3YNL197C RTN2Q12443 393 aa3.65□□□□□ -1.83
WHI3YNL197C CDC43P18898 376 aa3.64□□□□□ -1.83
WHI3YNL197C RPC53P25441 422 aa3.64□□□□□ -1.83
WHI3YNL197C CDC15P27636 974 aa3.64□□□□□ -1.83
WHI3YNL197C ORC2P32833 620 aa3.64□□□□□ -1.83
WHI3YNL197C UTP9P38882 575 aaKnown RBP3.64□□□□□ -1.83
WHI3YNL197C PAC2P39937 518 aa3.64□□□□□ -1.83
WHI3YNL197C YFR020WP43600 232 aa3.64□□□□□ -1.83
WHI3YNL197C STR3P53101 465 aaKnown RBP3.64□□□□□ -1.83
WHI3YNL197C MDG1P53885 366 aa3.64□□□□□ -1.83
WHI3YNL197C IRC10Q08118 586 aa3.64□□□□□ -1.83
WHI3YNL197C LYS21Q12122 440 aaKnown RBP3.64□□□□□ -1.83
WHI3YNL197C CHO1P08456 276 aa3.63□□□□□ -1.83
WHI3YNL197C KRS1P15180 591 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 129.8 ms