RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeast

Gene SSN8, Length 972 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSN8	YNL025C	DBP3	P20447	523 aa	Known RBP	3.19	□□□□□ -1.9
SSN8	YNL025C	YJU2	P28320	278 aa	Predicted RBP	3.19	□□□□□ -1.9
SSN8	YNL025C	MEI5	P32489	222 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	RRP1	P35178	278 aa	Predicted RBP	3.19	□□□□□ -1.9
SSN8	YNL025C	KES1	P35844	434 aa	Known RBP	3.19	□□□□□ -1.9
SSN8	YNL025C	YKT6	P36015	200 aa	Known RBP	3.19	□□□□□ -1.9
SSN8	YNL025C	VID24	P38263	362 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	PIH1	P38768	344 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	YHR054C	P38780	354 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	SET5	P38890	526 aa	Known RBP	3.19	□□□□□ -1.9
SSN8	YNL025C	SMF1	P38925	575 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	LYS9	P38999	446 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	FUN12	P39730	1002 aa	Known RBP	3.19	□□□□□ -1.9
SSN8	YNL025C	EAF5	P39995	279 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	ALD5	P40047	520 aa	Known RBP	3.19	□□□□□ -1.9
SSN8	YNL025C	FMP10	P40098	244 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	LTP1	P40347	161 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	YJL070C	P40361	888 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	CAB2	P40506	365 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	VID28	P40547	921 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	NAS2	P40555	220 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	TAH11	P47112	604 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	HXT16	P47185	567 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	MRX6	P48564	524 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	PSP1	P50896	841 aa	Known RBP	3.19	□□□□□ -1.9
SSN8	YNL025C	IMA1	P53051	589 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	RRT6	P53117	311 aa	Predicted RBP	3.19	□□□□□ -1.9
SSN8	YNL025C	VPS73	P53142	486 aa	Known RBP	3.19	□□□□□ -1.9
SSN8	YNL025C	HOP2	P53187	214 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	EFM5	P53200	248 aa	Known RBP	3.19	□□□□□ -1.9
SSN8	YNL025C	YGR066C	P53242	292 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	YGR266W	P53326	701 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	YNR068C	P53754	272 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	NOP15	P53927	220 aa	Predicted RBP	3.19	□□□□□ -1.9
SSN8	YNL025C	DAK1	P54838	584 aa	Known RBP	3.19	□□□□□ -1.9
SSN8	YNL025C	NRG1	Q03125	231 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	YMR210W	Q03649	449 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	RCO1	Q04779	684 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	CRR1	Q05790	422 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	MDM36	Q06820	579 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	NOP6	Q07623	225 aa	Known RBP	3.19	□□□□□ -1.9
SSN8	YNL025C	AAD4	Q07747	329 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	THI21	Q08975	551 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	HOS1	Q12214	470 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	PSY3	Q12318	242 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	GPM3	Q12326	303 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	CTF3	Q12748	733 aa		3.19	□□□□□ -1.9
SSN8	YNL025C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
SSN8	YNL025C	SUI3	P09064	285 aa	Known RBP	3.18	□□□□□ -1.9
SSN8	YNL025C	BIK1	P11709	440 aa		3.18	□□□□□ -1.9
SSN8	YNL025C	GLN4	P13188	809 aa	Known RBP	3.18	□□□□□ -1.9
SSN8	YNL025C	YCK1	P23291	538 aa		3.18	□□□□□ -1.9
SSN8	YNL025C	MIH1	P23748	554 aa		3.18	□□□□□ -1.9
SSN8	YNL025C	IMG2	P25642	146 aa	Predicted RBP	3.18	□□□□□ -1.9
SSN8	YNL025C	HMX1	P32339	317 aa		3.18	□□□□□ -1.9
SSN8	YNL025C	DPH5	P32469	300 aa	Predicted RBP	3.18	□□□□□ -1.9
SSN8	YNL025C	MRE11	P32829	692 aa		3.18	□□□□□ -1.9
SSN8	YNL025C	LTV1	P34078	463 aa		3.18	□□□□□ -1.9
SSN8	YNL025C	SIC1	P38634	284 aa		3.18	□□□□□ -1.9
SSN8	YNL025C	TCD1	P38756	429 aa		3.18	□□□□□ -1.9
SSN8	YNL025C	ERC1	P38767	581 aa		3.18	□□□□□ -1.9
SSN8	YNL025C	KEL1	P38853	1164 aa	Known RBP	3.18	□□□□□ -1.9
SSN8	YNL025C	AIM10	P39965	576 aa	Known RBP	3.18	□□□□□ -1.9
SSN8	YNL025C	PFK26	P40433	827 aa	Known RBP	3.18	□□□□□ -1.9
SSN8	YNL025C	PKP1	P40530	394 aa		3.18	□□□□□ -1.9
SSN8	YNL025C	BST1	P43571	1029 aa		3.18	□□□□□ -1.9
SSN8	YNL025C	SSY5	P47002	699 aa		3.18	□□□□□ -1.9
SSN8	YNL025C	TRF5	P48561	642 aa	Known RBP	3.18	□□□□□ -1.9
SSN8	YNL025C	SHE4	P51534	789 aa		3.18	□□□□□ -1.9
SSN8	YNL025C	PAN2	P53010	1115 aa	Predicted RBP	3.18	□□□□□ -1.9
SSN8	YNL025C	MLC1	P53141	149 aa		3.18	□□□□□ -1.9
SSN8	YNL025C	MDR1	P53258	950 aa		3.18	□□□□□ -1.9
SSN8	YNL025C	PRO2	P54885	456 aa	Known RBP	3.18	□□□□□ -1.9
SSN8	YNL025C	YSA1	Q01976	231 aa		3.18	□□□□□ -1.9
SSN8	YNL025C	MRD1	Q06106	887 aa	Known RBP	3.18	□□□□□ -1.9
SSN8	YNL025C	KAP95	Q06142	861 aa	Known RBP	3.18	□□□□□ -1.9
SSN8	YNL025C	SKG3	Q06315	1026 aa		3.18	□□□□□ -1.9
SSN8	YNL025C	BMS1	Q08965	1183 aa	Known RBP	3.18	□□□□□ -1.9
SSN8	YNL025C	GET3	Q12154	354 aa	Known RBP	3.18	□□□□□ -1.9
SSN8	YNL025C	RPN5	Q12250	445 aa	Known RBP	3.18	□□□□□ -1.9
SSN8	YNL025C	ERG27	Q12452	347 aa	Known RBP	3.18	□□□□□ -1.9
SSN8	YNL025C	ADF1	Q2V2Q1	113 aa		3.18	□□□□□ -1.9
SSN8	YNL025C	NBL1	Q3E7Y6	73 aa		3.18	□□□□□ -1.9
SSN8	YNL025C	YBR182C-A	Q8TGU6	64 aa		3.18	□□□□□ -1.9
SSN8	YNL025C	YRF1-4	O13559	1382 aa		3.17	□□□□□ -1.9
SSN8	YNL025C	SUP35	P05453	685 aa	Known RBP	3.17	□□□□□ -1.9
SSN8	YNL025C	ADE3	P07245	946 aa	Known RBP	3.17	□□□□□ -1.9
SSN8	YNL025C	TUB1	P09733	447 aa	Known RBP	3.17	□□□□□ -1.9
SSN8	YNL025C	STE12	P13574	688 aa		3.17	□□□□□ -1.9
SSN8	YNL025C	APE1	P14904	514 aa		3.17	□□□□□ -1.9
SSN8	YNL025C	RIT1	P23796	513 aa		3.17	□□□□□ -1.9
SSN8	YNL025C	DMC1	P25453	334 aa		3.17	□□□□□ -1.9
SSN8	YNL025C	CWH43	P25618	953 aa		3.17	□□□□□ -1.9
SSN8	YNL025C	URA7	P28274	579 aa	Known RBP	3.17	□□□□□ -1.9
SSN8	YNL025C	MF(ALPHA)2	P32435	120 aa		3.17	□□□□□ -1.9
SSN8	YNL025C	HXT4	P32467	576 aa		3.17	□□□□□ -1.9
SSN8	YNL025C	HEL1	P36113	551 aa		3.17	□□□□□ -1.9
SSN8	YNL025C	YKR051W	P36142	418 aa		3.17	□□□□□ -1.9
SSN8	YNL025C	PCH2	P38126	564 aa		3.17	□□□□□ -1.9
SSN8	YNL025C	REG2	P38232	338 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms