RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W HCR1Q05775 265 aaKnown RBP1.24□□□□□ -2.21
PRP39YML046W ERG1P32476 496 aaKnown RBP1.23□□□□□ -2.21
PRP39YML046W SER1P33330 395 aaKnown RBP1.23□□□□□ -2.21
PRP39YML046W COS10P52924 374 aa1.23□□□□□ -2.21
PRP39YML046W SET6Q12529 373 aa1.23□□□□□ -2.21
PRP39YML046W HSL1P34244 1518 aa1.23□□□□□ -2.21
PRP39YML046W GID7P25569 745 aa1.22□□□□□ -2.21
PRP39YML046W RPS7AP26786 190 aaKnown RBP1.22□□□□□ -2.21
PRP39YML046W YDR109CQ04585 715 aa1.22□□□□□ -2.21
PRP39YML046W RTK1Q12100 620 aaPredicted RBP1.22□□□□□ -2.21
PRP39YML046W MDS3P53094 1487 aa1.22□□□□□ -2.21
PRP39YML046W STE50P25344 346 aa1.22□□□□□ -2.21
PRP39YML046W AGP2P38090 596 aa1.22□□□□□ -2.21
PRP39YML046W RRP3P38712 501 aaKnown RBP1.22□□□□□ -2.21
PRP39YML046W GUF1P46943 645 aa1.22□□□□□ -2.21
PRP39YML046W TEL1P38110 2787 aa1.21□□□□□ -2.22
PRP39YML046W SWR1Q05471 1514 aa1.21□□□□□ -2.22
PRP39YML046W RPL8AP17076 256 aaKnown RBP1.21□□□□□ -2.22
PRP39YML046W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
PRP39YML046W EMP65P40085 556 aa1.21□□□□□ -2.22
PRP39YML046W MAD2P40958 196 aa1.21□□□□□ -2.22
PRP39YML046W YFR016CP43597 1233 aaKnown RBP1.21□□□□□ -2.22
PRP39YML046W IKS1P47042 667 aa1.21□□□□□ -2.22
PRP39YML046W YGR079WP53249 370 aa1.21□□□□□ -2.22
PRP39YML046W YLR152CP54072 576 aa1.21□□□□□ -2.22
PRP39YML046W ATG21Q02887 496 aa1.21□□□□□ -2.22
PRP39YML046W CWC2Q12046 339 aaPredicted RBP1.21□□□□□ -2.22
PRP39YML046W YPR027CQ12079 277 aa1.21□□□□□ -2.22
PRP39YML046W STV1P37296 890 aa1.2□□□□□ -2.22
PRP39YML046W ERG7P38604 731 aa1.2□□□□□ -2.22
PRP39YML046W PHM8P40025 321 aa1.2□□□□□ -2.22
PRP39YML046W RPT2P40327 437 aaKnown RBP1.2□□□□□ -2.22
PRP39YML046W AAD4Q07747 329 aa1.2□□□□□ -2.22
PRP39YML046W CHD1P32657 1468 aa1.2□□□□□ -2.22
PRP39YML046W ATS1P31386 333 aa1.2□□□□□ -2.22
PRP39YML046W SSP120P39931 234 aaKnown RBP1.2□□□□□ -2.22
PRP39YML046W EAF5P39995 279 aa1.2□□□□□ -2.22
PRP39YML046W HXT9P40885 567 aa1.2□□□□□ -2.22
PRP39YML046W IDP2P41939 412 aa1.2□□□□□ -2.22
PRP39YML046W RTT101P47050 842 aa1.2□□□□□ -2.22
PRP39YML046W ERP1Q05359 219 aaKnown RBP1.2□□□□□ -2.22
PRP39YML046W RPB8P20436 146 aa1.19□□□□□ -2.22
PRP39YML046W POL31P46957 487 aa1.19□□□□□ -2.22
PRP39YML046W BTN2P53286 410 aa1.19□□□□□ -2.22
PRP39YML046W THI73Q07904 523 aa1.19□□□□□ -2.22
PRP39YML046W RFC1P38630 861 aaKnown RBP1.18□□□□□ -2.22
PRP39YML046W RPR2P40571 144 aa1.18□□□□□ -2.22
PRP39YML046W ESF2P53743 316 aaKnown RBP1.18□□□□□ -2.22
PRP39YML046W YNL034WP53963 612 aa1.18□□□□□ -2.22
PRP39YML046W YVH1Q02256 364 aaKnown RBP1.18□□□□□ -2.22
PRP39YML046W PFA5Q03289 374 aa1.18□□□□□ -2.22
PRP39YML046W STP3Q05937 343 aa1.18□□□□□ -2.22
PRP39YML046W RGI2P40188 164 aa1.18□□□□□ -2.22
PRP39YML046W MAK10Q02197 733 aa1.18□□□□□ -2.22
PRP39YML046W RPM2Q02773 1202 aa1.18□□□□□ -2.22
PRP39YML046W SKY1Q03656 742 aa1.18□□□□□ -2.22
PRP39YML046W GRC3Q07845 632 aa1.18□□□□□ -2.22
PRP39YML046W YEH2Q07950 538 aa1.18□□□□□ -2.22
PRP39YML046W NOP14Q99207 810 aaKnown RBP1.18□□□□□ -2.22
PRP39YML046W TAO3P40468 2376 aa1.17□□□□□ -2.22
PRP39YML046W MTF1P14908 341 aaKnown RBP1.17□□□□□ -2.22
PRP39YML046W ADE16P54113 591 aaKnown RBP1.17□□□□□ -2.22
PRP39YML046W VPS64Q03944 604 aa1.17□□□□□ -2.22
PRP39YML046W YDL218WQ07629 317 aa1.17□□□□□ -2.22
PRP39YML046W STL1P39932 569 aa1.16□□□□□ -2.22
PRP39YML046W MSY1P48527 492 aa1.16□□□□□ -2.22
PRP39YML046W TDA7P53882 636 aaPredicted RBP1.16□□□□□ -2.22
PRP39YML046W TRI1Q05024 226 aa1.16□□□□□ -2.22
PRP39YML046W DBP10Q12389 995 aaKnown RBP1.16□□□□□ -2.22
PRP39YML046W ADR1P07248 1323 aa1.16□□□□□ -2.22
PRP39YML046W NUP145P49687 1317 aa1.16□□□□□ -2.22
PRP39YML046W PCT1P13259 424 aa1.16□□□□□ -2.22
PRP39YML046W YCL021W-AQ96VH3 125 aa1.16□□□□□ -2.22
PRP39YML046W BNI1P41832 1953 aa1.15□□□□□ -2.23
PRP39YML046W DAL3P32459 195 aa1.15□□□□□ -2.23
PRP39YML046W NDC1P32500 655 aa1.15□□□□□ -2.23
PRP39YML046W YME1P32795 747 aa1.15□□□□□ -2.23
PRP39YML046W SPC34P36131 295 aa1.15□□□□□ -2.23
PRP39YML046W ADE17P38009 592 aaKnown RBP1.15□□□□□ -2.23
PRP39YML046W YER130CP39959 443 aa1.15□□□□□ -2.23
PRP39YML046W PMT3P47190 753 aa1.15□□□□□ -2.23
PRP39YML046W UME1Q03010 460 aa1.15□□□□□ -2.23
PRP39YML046W AIM6Q07716 390 aa1.15□□□□□ -2.23
PRP39YML046W RRP12Q12754 1228 aaKnown RBP1.15□□□□□ -2.23
PRP39YML046W YOR093CQ12275 1648 aa1.15□□□□□ -2.23
PRP39YML046W CHO1P08456 276 aa1.14□□□□□ -2.23
PRP39YML046W ISY1P21374 235 aaPredicted RBP1.14□□□□□ -2.23
PRP39YML046W TKL1P23254 680 aaKnown RBP1.14□□□□□ -2.23
PRP39YML046W RMP1Q12530 201 aa1.14□□□□□ -2.23
PRP39YML046W PMR1P13586 950 aa1.14□□□□□ -2.23
PRP39YML046W HOL1P53389 586 aa1.14□□□□□ -2.23
PRP39YML046W NUP100Q02629 959 aa1.14□□□□□ -2.23
PRP39YML046W GTB1Q04924 702 aa1.14□□□□□ -2.23
PRP39YML046W YOR387CQ08910 206 aa1.14□□□□□ -2.23
PRP39YML046W BAG7Q12128 409 aa1.14□□□□□ -2.23
PRP39YML046W RVB2Q12464 471 aaKnown RBP1.14□□□□□ -2.23
PRP39YML046W BI3Q9ZZW7 517 aa1.14□□□□□ -2.23
PRP39YML046W ACH1P32316 526 aa1.13□□□□□ -2.23
PRP39YML046W SAC1P32368 623 aaKnown RBP1.13□□□□□ -2.23
PRP39YML046W SPC110P32380 944 aa1.13□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms