RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDF1	YLR399C	YHR020W	P38708	688 aa	Known RBP	12.33	□□□□□ -0.44
BDF1	YLR399C	CCT8	P47079	568 aa	Known RBP	12.33	□□□□□ -0.44
BDF1	YLR399C	YOL159C	Q08300	171 aa		12.33	□□□□□ -0.44
BDF1	YLR399C	YRR1	Q12172	810 aa		12.33	□□□□□ -0.44
BDF1	YLR399C	MED11	Q99278	115 aa		12.33	□□□□□ -0.44
BDF1	YLR399C	LEU1	P07264	779 aa	Known RBP	12.33	□□□□□ -0.44
BDF1	YLR399C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	12.33	□□□□□ -0.44	not detected
BDF1	YLR399C	KGD2	P19262	463 aa	Predicted RBP	12.33	□□□□□ -0.44
BDF1	YLR399C	CSM1	P25651	190 aa		12.33	□□□□□ -0.44
BDF1	YLR399C	PRR1	P28708	518 aa		12.33	□□□□□ -0.44
BDF1	YLR399C	PIM1	P36775	1133 aa		12.33	□□□□□ -0.44
BDF1	YLR399C	CRP1	P38845	465 aa	Known RBP	12.33	□□□□□ -0.44
BDF1	YLR399C	FET5	P43561	622 aa		12.33	□□□□□ -0.44
BDF1	YLR399C	RBG2	P53295	368 aa	Known RBP	12.33	□□□□□ -0.44
BDF1	YLR399C	CSN9	Q03981	162 aa		12.33	□□□□□ -0.44
BDF1	YLR399C	ESA1	Q08649	445 aa		12.33	□□□□□ -0.44
BDF1	YLR399C	NSL1	Q12143	216 aa		12.33	□□□□□ -0.44
BDF1	YLR399C	CCP1	P00431	361 aa		12.32	□□□□□ -0.44
BDF1	YLR399C	TOP3	P13099	656 aa		12.32	□□□□□ -0.44
BDF1	YLR399C	SIT4	P20604	311 aa		12.32	□□□□□ -0.44
BDF1	YLR399C	RGT1	P32862	1170 aa		12.32	□□□□□ -0.44
BDF1	YLR399C	YLF2	P38746	405 aa		12.32	□□□□□ -0.44
BDF1	YLR399C	OTU2	P38747	307 aa	Known RBP	12.32	□□□□□ -0.44
BDF1	YLR399C	CEM1	P39525	442 aa		12.32	□□□□□ -0.44
BDF1	YLR399C	PRM2	P40534	656 aa		12.32	□□□□□ -0.44
BDF1	YLR399C	GLG2	P47011	380 aa		12.32	□□□□□ -0.44
BDF1	YLR399C	MDE1	P47095	244 aa		12.32	□□□□□ -0.44
BDF1	YLR399C	CWC25	P53854	179 aa	Known RBP	12.32	□□□□□ -0.44
BDF1	YLR399C	DOT1	Q04089	582 aa	Known RBP	12.32	□□□□□ -0.44
BDF1	YLR399C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	12.32	□□□□□ -0.44	not detected
BDF1	YLR399C	YLL056C	Q12177	298 aa		12.32	□□□□□ -0.44
BDF1	YLR399C	DCP1	Q12517	231 aa	Predicted RBP	12.32	□□□□□ -0.44
BDF1	YLR399C	UGA1	P17649	471 aa		12.31	□□□□□ -0.44
BDF1	YLR399C	CCA1	P21269	546 aa		12.31	□□□□□ -0.44
BDF1	YLR399C	YKU70	P32807	602 aa		12.31	□□□□□ -0.44
BDF1	YLR399C	SLX1	P38324	304 aa		12.31	□□□□□ -0.44
BDF1	YLR399C	VMA13	P41807	478 aa	Known RBP	12.31	□□□□□ -0.44
BDF1	YLR399C	YJL181W	P46987	611 aa		12.31	□□□□□ -0.44
BDF1	YLR399C	ZAP1	P47043	880 aa		12.31	□□□□□ -0.44
BDF1	YLR399C	AIF1	P52923	378 aa		12.31	□□□□□ -0.44
BDF1	YLR399C	YOL036W	Q08206	761 aa		12.31	□□□□□ -0.44
BDF1	YLR399C	SGT1	Q08446	395 aa		12.31	□□□□□ -0.44
BDF1	YLR399C	REC8	Q12188	680 aa		12.31	□□□□□ -0.44
BDF1	YLR399C	CMR1	Q12510	522 aa	Known RBP	12.31	□□□□□ -0.44
BDF1	YLR399C	TPK1	P06244	397 aa		12.31	□□□□□ -0.44
BDF1	YLR399C	NSP1	P14907	823 aa	Known RBP	12.31	□□□□□ -0.44
BDF1	YLR399C	ASK1	P35734	292 aa		12.31	□□□□□ -0.44
BDF1	YLR399C	STB6	P36085	766 aa		12.31	□□□□□ -0.44
BDF1	YLR399C	YBL028C	P38202	106 aa		12.31	□□□□□ -0.44
BDF1	YLR399C	THO1	P40040	218 aa	Known RBP	12.31	□□□□□ -0.44
BDF1	YLR399C	BUD32	P53323	261 aa		12.31	□□□□□ -0.44
BDF1	YLR399C	YNL095C	P53932	642 aa		12.31	□□□□□ -0.44
BDF1	YLR399C	ECM9	Q02202	377 aa		12.31	□□□□□ -0.44
BDF1	YLR399C	SSA1	P10591	642 aa	Known RBP	12.3	□□□□□ -0.44
BDF1	YLR399C	NMT1	P14743	455 aa		12.3	□□□□□ -0.44
BDF1	YLR399C	GRX2	P17695	143 aa	Known RBP	12.3	□□□□□ -0.44
BDF1	YLR399C	DBF2	P22204	572 aa		12.3	□□□□□ -0.44
BDF1	YLR399C	FRE1	P32791	686 aa		12.3	□□□□□ -0.44
BDF1	YLR399C	YHR219W	P38900	624 aa		12.3	□□□□□ -0.44
BDF1	YLR399C	VMA7	P39111	118 aa		12.3	□□□□□ -0.44
BDF1	YLR399C	ALB1	P47019	175 aa	Predicted RBP	12.3	□□□□□ -0.44
BDF1	YLR399C	SLD3	P53135	668 aa		12.3	□□□□□ -0.44
BDF1	YLR399C	KIN1	P13185	1064 aa		12.3	□□□□□ -0.44
BDF1	YLR399C	SPC34	P36131	295 aa		12.3	□□□□□ -0.44
BDF1	YLR399C	ECM13	P38195	257 aa		12.3	□□□□□ -0.44
BDF1	YLR399C	YBL029W	P38201	376 aa		12.3	□□□□□ -0.44
BDF1	YLR399C	IST2	P38250	946 aa		12.3	□□□□□ -0.44
BDF1	YLR399C	RPN11	P43588	306 aa	Known RBP	12.3	□□□□□ -0.44
BDF1	YLR399C	ISU1	Q03020	165 aa		12.3	□□□□□ -0.44
BDF1	YLR399C	COX20	Q04935	205 aa		12.3	□□□□□ -0.44
BDF1	YLR399C	MDM36	Q06820	579 aa		12.3	□□□□□ -0.44
BDF1	YLR399C	ACK1	Q07622	623 aa	Predicted RBP	12.3	□□□□□ -0.44
BDF1	YLR399C	VPS54	Q12071	889 aa		12.3	□□□□□ -0.44
BDF1	YLR399C	RAD59	Q12223	238 aa		12.3	□□□□□ -0.44
BDF1	YLR399C	GIS3	Q12418	502 aa		12.3	□□□□□ -0.44
BDF1	YLR399C	GSC2	P40989	1895 aa		12.29	□□□□□ -0.44
BDF1	YLR399C	ERR1	P0CX10	437 aa		12.29	□□□□□ -0.44
BDF1	YLR399C	ERR2	P0CX11	437 aa		12.29	□□□□□ -0.44
BDF1	YLR399C	TOM20	P35180	183 aa		12.29	□□□□□ -0.44
BDF1	YLR399C	YBR241C	P38142	488 aa		12.29	□□□□□ -0.44
BDF1	YLR399C	UTP18	P40362	594 aa	Predicted RBP	12.29	□□□□□ -0.44
BDF1	YLR399C	ERR3	P42222	437 aa		12.29	□□□□□ -0.44
BDF1	YLR399C	LIF1	P53150	421 aa		12.29	□□□□□ -0.44
BDF1	YLR399C	MRPL50	P53724	139 aa		12.29	□□□□□ -0.44
BDF1	YLR399C	YLR326W	Q06170	240 aa	Known RBP	12.29	□□□□□ -0.44
BDF1	YLR399C	COT1	P32798	439 aa		12.28	□□□□□ -0.44
BDF1	YLR399C	SRP101	P32916	621 aa		12.28	□□□□□ -0.44
BDF1	YLR399C	YAT2	P40017	923 aa		12.28	□□□□□ -0.44
BDF1	YLR399C	YJR098C	P47139	656 aa		12.28	□□□□□ -0.44
BDF1	YLR399C	ASN1	P49089	572 aa	Known RBP	12.28	□□□□□ -0.44
BDF1	YLR399C	MUS81	Q04149	632 aa	Predicted RBP	12.28	□□□□□ -0.44
BDF1	YLR399C	PHO4	P07270	312 aa	Known RBP	12.28	□□□□□ -0.44
BDF1	YLR399C	ART10	P18634	518 aa	Known RBP	12.28	□□□□□ -0.44
BDF1	YLR399C	COX11	P19516	300 aa	Known RBP	12.28	□□□□□ -0.44
BDF1	YLR399C	DMC1	P25453	334 aa		12.28	□□□□□ -0.44
BDF1	YLR399C	PTC6	P25646	442 aa		12.28	□□□□□ -0.44
BDF1	YLR399C	CCT6	P39079	546 aa		12.28	□□□□□ -0.44
BDF1	YLR399C	SER3	P40054	469 aa		12.28	□□□□□ -0.44
BDF1	YLR399C	ASG7	P46993	209 aa		12.28	□□□□□ -0.44
BDF1	YLR399C	ARP10	Q04549	284 aa		12.28	□□□□□ -0.44

Retrieved 100 of 5,963 RNA–protein pairs in 68.9 ms