RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C EPT1P22140 391 aa11.66□□□□□ -0.54
YKR040CYKR040C CIN8P27895 1000 aa11.66□□□□□ -0.54
YKR040CYKR040C RRP1P35178 278 aaPredicted RBP11.66□□□□□ -0.54
YKR040CYKR040C RPC37P36121 282 aa11.66□□□□□ -0.54
YKR040CYKR040C TGL2P54857 326 aa11.66□□□□□ -0.54
YKR040CYKR040C NOP6Q07623 225 aaKnown RBP11.66□□□□□ -0.54
YKR040CYKR040C RPN8Q08723 338 aaKnown RBP11.66□□□□□ -0.54
YKR040CYKR040C ERG20P08524 352 aaKnown RBP11.65□□□□□ -0.54
YKR040CYKR040C RPL40AP0CH08 128 aaKnown RBP11.65□□□□□ -0.54
YKR040CYKR040C RPL40BP0CH09 128 aaKnown RBP11.65□□□□□ -0.54
YKR040CYKR040C INO1P11986 533 aa11.65□□□□□ -0.54
YKR040CYKR040C SNT1P25357 1226 aa11.65□□□□□ -0.54
YKR040CYKR040C GND1P38720 489 aaKnown RBP11.65□□□□□ -0.54
YKR040CYKR040C PCL5P38794 229 aa11.65□□□□□ -0.54
YKR040CYKR040C ACO2P39533 789 aa11.65□□□□□ -0.54
YKR040CYKR040C ALG8P40351 577 aa11.65□□□□□ -0.54
YKR040CYKR040C IRR1P40541 1150 aa11.65□□□□□ -0.54
YKR040CYKR040C FRE4P53746 719 aa11.65□□□□□ -0.54
YKR040CYKR040C PET117Q02771 107 aa11.65□□□□□ -0.54
YKR040CYKR040C YDR109CQ04585 715 aa11.65□□□□□ -0.54
YKR040CYKR040C ARG7Q04728 441 aa11.65□□□□□ -0.54
YKR040CYKR040C ADE13Q05911 482 aaKnown RBP11.65□□□□□ -0.54
YKR040CYKR040C BUD7Q08754 746 aa11.65□□□□□ -0.54
YKR040CYKR040C ACC1Q00955 2233 aaKnown RBP11.64□□□□□ -0.55
YKR040CYKR040C INH1P01097 85 aa11.64□□□□□ -0.55
YKR040CYKR040C TEF1P02994 458 aaKnown RBP11.64□□□□□ -0.55
YKR040CYKR040C RPO26P20435 155 aa11.64□□□□□ -0.55
YKR040CYKR040C MRPL9P31334 269 aa11.64□□□□□ -0.55
YKR040CYKR040C STB6P36085 766 aa11.64□□□□□ -0.55
YKR040CYKR040C UTH1P36135 365 aa11.64□□□□□ -0.55
YKR040CYKR040C LDB7P38210 180 aa11.64□□□□□ -0.55
YKR040CYKR040C TIM17P39515 158 aa11.64□□□□□ -0.55
YKR040CYKR040C MEF2P39677 819 aa11.64□□□□□ -0.55
YKR040CYKR040C YPS6P40583 537 aa11.64□□□□□ -0.55
YKR040CYKR040C PEX8P53248 589 aa11.64□□□□□ -0.55
YKR040CYKR040C SWS2P53937 143 aa11.64□□□□□ -0.55
YKR040CYKR040C HRK1Q08732 759 aaKnown RBP11.64□□□□□ -0.55
YKR040CYKR040C RTT10Q08924 1013 aa11.64□□□□□ -0.55
YKR040CYKR040C TFB4Q12004 338 aa11.64□□□□□ -0.55
YKR040CYKR040C NSP1P14907 823 aaKnown RBP11.63□□□□□ -0.55
YKR040CYKR040C AMD1P15274 810 aaKnown RBP11.63□□□□□ -0.55
YKR040CYKR040C HEM15P16622 393 aa11.63□□□□□ -0.55
YKR040CYKR040C ATP12P22135 325 aa11.63□□□□□ -0.55
YKR040CYKR040C BEM1P29366 551 aa11.63□□□□□ -0.55
YKR040CYKR040C IML3P38265 245 aa11.63□□□□□ -0.55
YKR040CYKR040C SPP381P38282 291 aaPredicted RBP11.63□□□□□ -0.55
YKR040CYKR040C GTS1P40956 396 aa11.63□□□□□ -0.55
YKR040CYKR040C CEP3P40969 608 aa11.63□□□□□ -0.55
YKR040CYKR040C YGL108CP53139 140 aa11.63□□□□□ -0.55
YKR040CYKR040C TFB2Q02939 513 aa11.63□□□□□ -0.55
YKR040CYKR040C TRM82Q03774 444 aa11.63□□□□□ -0.55
YKR040CYKR040C EMI1Q04406 187 aa11.63□□□□□ -0.55
YKR040CYKR040C SRO7Q12038 1033 aa11.63□□□□□ -0.55
YKR040CYKR040C SMF3Q12078 473 aaPredicted RBP11.63□□□□□ -0.55
YKR040CYKR040C RTK1Q12100 620 aaPredicted RBP11.63□□□□□ -0.55
YKR040CYKR040C CPA1P07258 411 aaKnown RBP11.62□□□□□ -0.55
YKR040CYKR040C RPB2P08518 1224 aaKnown RBP11.62□□□□□ -0.55
YKR040CYKR040C ILS1P09436 1072 aaKnown RBP11.62□□□□□ -0.55
YKR040CYKR040C VAN1P23642 535 aa11.62□□□□□ -0.55
YKR040CYKR040C ERG6P25087 383 aaKnown RBP11.62□□□□□ -0.55
YKR040CYKR040C KAR4P25583 335 aa11.62□□□□□ -0.55
YKR040CYKR040C RFA2P26754 273 aaKnown RBP11.62□□□□□ -0.55
YKR040CYKR040C GUT2P32191 649 aa11.62□□□□□ -0.55
YKR040CYKR040C PRP18P33411 251 aaPredicted RBP11.62□□□□□ -0.55
YKR040CYKR040C DBP8P38719 431 aa11.62□□□□□ -0.55
YKR040CYKR040C CYC2P38909 366 aa11.62□□□□□ -0.55
YKR040CYKR040C IME4P41833 600 aa11.62□□□□□ -0.55
YKR040CYKR040C YFR018CP43599 363 aa11.62□□□□□ -0.55
YKR040CYKR040C NUT2Q06213 157 aa11.62□□□□□ -0.55
YKR040CYKR040C OPT2Q06593 877 aa11.62□□□□□ -0.55
YKR040CYKR040C YLL032CQ07834 825 aaKnown RBP RIP-Chip data11.62□□□□□ -0.55not detected
YKR040CYKR040C RMD5Q12508 421 aa11.62□□□□□ -0.55
YKR040CYKR040C AMS1P22855 1083 aa11.61□□□□□ -0.55
YKR040CYKR040C PHO84P25297 587 aaKnown RBP11.61□□□□□ -0.55
YKR040CYKR040C GDA1P32621 518 aa11.61□□□□□ -0.55
YKR040CYKR040C TOM20P35180 183 aa11.61□□□□□ -0.55
YKR040CYKR040C CCT6P39079 546 aa11.61□□□□□ -0.55
YKR040CYKR040C YIL108WP40483 696 aaKnown RBP11.61□□□□□ -0.55
YKR040CYKR040C ALA1P40825 983 aaKnown RBP11.61□□□□□ -0.55
YKR040CYKR040C ARH1P48360 493 aa11.61□□□□□ -0.55
YKR040CYKR040C HOS3Q02959 697 aaKnown RBP11.61□□□□□ -0.55
YKR040CYKR040C ARX1Q03862 593 aaKnown RBP11.61□□□□□ -0.55
YKR040CYKR040C PNP1Q05788 311 aa11.61□□□□□ -0.55
YKR040CYKR040C TRM8Q12009 286 aa11.61□□□□□ -0.55
YKR040CYKR040C VPS68Q12016 184 aa11.61□□□□□ -0.55
YKR040CYKR040C YPR089WO13585 888 aa11.6□□□□□ -0.55
YKR040CYKR040C SEM1O94742 89 aa11.6□□□□□ -0.55
YKR040CYKR040C TUB1P09733 447 aaKnown RBP11.6□□□□□ -0.55
YKR040CYKR040C GPA2P10823 449 aa11.6□□□□□ -0.55
YKR040CYKR040C GLN4P13188 809 aaKnown RBP11.6□□□□□ -0.55
YKR040CYKR040C HSP26P15992 214 aaKnown RBP RIP-Chip data11.6□□□□□ -0.55not detected
YKR040CYKR040C SNF5P18480 905 aa11.6□□□□□ -0.55
YKR040CYKR040C GMH1P36125 273 aa11.6□□□□□ -0.55
YKR040CYKR040C MUM2P38236 366 aa11.6□□□□□ -0.55
YKR040CYKR040C SUN4P53616 420 aa11.6□□□□□ -0.55
YKR040CYKR040C CCE1Q03702 353 aa11.6□□□□□ -0.55
YKR040CYKR040C CDC123Q05791 360 aa11.6□□□□□ -0.55
YKR040CYKR040C VTA1Q06263 330 aa11.6□□□□□ -0.55
YKR040CYKR040C RAD1P06777 1100 aa11.59□□□□□ -0.55
YKR040CYKR040C SBP1P10080 294 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 5,963 RNA–protein pairs in 201.2 ms