RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W SRP54P20424 541 aaKnown RBP4.45□□□□□ -1.7
SEC28YIL076W STE50P25344 346 aa4.45□□□□□ -1.7
SEC28YIL076W NUP120P35729 1037 aa4.45□□□□□ -1.7
SEC28YIL076W RKM3P38222 552 aa4.45□□□□□ -1.7
SEC28YIL076W EFM2P38347 419 aa4.45□□□□□ -1.7
SEC28YIL076W FAF1P40546 346 aaPredicted RBP4.45□□□□□ -1.7
SEC28YIL076W FMP42Q04991 504 aa4.45□□□□□ -1.7
SEC28YIL076W APL5Q08951 932 aaKnown RBP4.45□□□□□ -1.7
SEC28YIL076W PET111P08468 800 aa4.44□□□□□ -1.7
SEC28YIL076W SPO16P17122 198 aa4.44□□□□□ -1.7
SEC28YIL076W PHO81P17442 1178 aa4.44□□□□□ -1.7
SEC28YIL076W LEU5P38702 357 aa4.44□□□□□ -1.7
SEC28YIL076W RTT107P38850 1070 aa4.44□□□□□ -1.7
SEC28YIL076W IML2P47031 731 aa4.44□□□□□ -1.7
SEC28YIL076W HOS2P53096 452 aaPredicted RBP4.44□□□□□ -1.7
SEC28YIL076W UTP21Q06078 939 aaPredicted RBP4.44□□□□□ -1.7
SEC28YIL076W CRN1Q06440 651 aa4.44□□□□□ -1.7
SEC28YIL076W PPZ1P26570 692 aa4.43□□□□□ -1.7
SEC28YIL076W LHS1P36016 881 aa4.43□□□□□ -1.7
SEC28YIL076W PSP1P50896 841 aaKnown RBP4.43□□□□□ -1.7
SEC28YIL076W YGL260WP53056 76 aa4.43□□□□□ -1.7
SEC28YIL076W YMR254CQ04838 102 aa4.43□□□□□ -1.7
SEC28YIL076W MCP2Q06567 569 aa4.43□□□□□ -1.7
SEC28YIL076W NTR2P36118 322 aaPredicted RBP4.42□□□□□ -1.7
SEC28YIL076W MRX1P40050 688 aa4.42□□□□□ -1.7
SEC28YIL076W RPT2P40327 437 aaKnown RBP4.42□□□□□ -1.7
SEC28YIL076W YNL181WP53878 407 aa4.42□□□□□ -1.7
SEC28YIL076W YMR317WQ04893 1140 aa4.42□□□□□ -1.7
SEC28YIL076W YTH1Q06102 208 aaPredicted RBP4.42□□□□□ -1.7
SEC28YIL076W COX17Q12287 69 aa4.42□□□□□ -1.7
SEC28YIL076W TKL1P23254 680 aaKnown RBP4.41□□□□□ -1.7
SEC28YIL076W BZZ1P38822 633 aa4.41□□□□□ -1.7
SEC28YIL076W SWP82P43554 623 aa4.41□□□□□ -1.7
SEC28YIL076W CTK2P46962 323 aa4.41□□□□□ -1.7
SEC28YIL076W SGF73P53165 657 aa4.41□□□□□ -1.7
SEC28YIL076W YNL234WP53857 426 aa4.41□□□□□ -1.7
SEC28YIL076W CSL4P53859 292 aaPredicted RBP4.41□□□□□ -1.7
SEC28YIL076W PCD1Q12524 340 aa4.41□□□□□ -1.7
SEC28YIL076W PHO2P07269 559 aa4.4□□□□□ -1.71
SEC28YIL076W TY2A-LR1P0C2J4 438 aa4.4□□□□□ -1.71
SEC28YIL076W TY2A-FP0CX61 438 aa4.4□□□□□ -1.71
SEC28YIL076W TY2A-GR2P0CX62 438 aa4.4□□□□□ -1.71
SEC28YIL076W RAP1P11938 827 aa4.4□□□□□ -1.71
SEC28YIL076W HNM1P19807 563 aa4.4□□□□□ -1.71
SEC28YIL076W TY2A-CP25383 438 aa4.4□□□□□ -1.71
SEC28YIL076W MGR1P25573 417 aa4.4□□□□□ -1.71
SEC28YIL076W YCL049CP25577 312 aa4.4□□□□□ -1.71
SEC28YIL076W SOF1P33750 489 aaKnown RBP4.4□□□□□ -1.71
SEC28YIL076W MRPL36P36531 177 aa4.4□□□□□ -1.71
SEC28YIL076W AAP1P37898 856 aaKnown RBP4.4□□□□□ -1.71
SEC28YIL076W PSF2P40359 213 aa4.4□□□□□ -1.71
SEC28YIL076W ASE1P50275 885 aa4.4□□□□□ -1.71
SEC28YIL076W ARC35P53731 342 aaKnown RBP4.4□□□□□ -1.71
SEC28YIL076W TY2A-DR2Q03483 438 aa4.4□□□□□ -1.71
SEC28YIL076W TY2A-BQ12260 438 aa4.4□□□□□ -1.71
SEC28YIL076W TY2A-OR2Q12293 438 aa4.4□□□□□ -1.71
SEC28YIL076W TY2A-DR1Q12392 438 aa4.4□□□□□ -1.71
SEC28YIL076W TY2A-OR1Q12439 438 aa4.4□□□□□ -1.71
SEC28YIL076W TY2A-DR3Q99303 438 aa4.4□□□□□ -1.71
SEC28YIL076W APA1P16550 321 aaKnown RBP4.39□□□□□ -1.71
SEC28YIL076W PDR3P33200 976 aa4.39□□□□□ -1.71
SEC28YIL076W FMP46P36141 133 aaKnown RBP4.39□□□□□ -1.71
SEC28YIL076W RFC1P38630 861 aaKnown RBP4.39□□□□□ -1.71
SEC28YIL076W NPR3P38742 1146 aa4.39□□□□□ -1.71
SEC28YIL076W ACA1P39970 489 aa4.39□□□□□ -1.71
SEC28YIL076W ECM10P39987 644 aa4.39□□□□□ -1.71
SEC28YIL076W COG1P53079 417 aa4.39□□□□□ -1.71
SEC28YIL076W YTP1P53584 459 aa4.39□□□□□ -1.71
SEC28YIL076W PAP2P53632 584 aaKnown RBP4.39□□□□□ -1.71
SEC28YIL076W TMA16Q08687 178 aa4.39□□□□□ -1.71
SEC28YIL076W TAH18Q12181 623 aa4.39□□□□□ -1.71
SEC28YIL076W EDE1P34216 1381 aa4.39□□□□□ -1.71
SEC28YIL076W TPK1P06244 397 aa4.38□□□□□ -1.71
SEC28YIL076W CDC23P16522 626 aa4.38□□□□□ -1.71
SEC28YIL076W MSM1P22438 575 aa4.38□□□□□ -1.71
SEC28YIL076W SAC1P32368 623 aaKnown RBP4.38□□□□□ -1.71
SEC28YIL076W SEC31P38968 1273 aaKnown RBP4.38□□□□□ -1.71
SEC28YIL076W HXT9P40885 567 aa4.38□□□□□ -1.71
SEC28YIL076W RSM28Q03430 361 aa4.38□□□□□ -1.71
SEC28YIL076W ARP10Q04549 284 aa4.38□□□□□ -1.71
SEC28YIL076W CIA1Q05583 330 aa4.38□□□□□ -1.71
SEC28YIL076W CLB2P24869 491 aa4.37□□□□□ -1.71
SEC28YIL076W RAD24P32641 659 aa4.37□□□□□ -1.71
SEC28YIL076W YPK3P38070 525 aa4.37□□□□□ -1.71
SEC28YIL076W YFR020WP43600 232 aa4.37□□□□□ -1.71
SEC28YIL076W GIS2P53849 153 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
SEC28YIL076W SMA1Q02651 245 aa4.37□□□□□ -1.71
SEC28YIL076W CTL1Q03220 320 aaKnown RBP4.37□□□□□ -1.71
SEC28YIL076W FCP1Q03254 732 aa4.37□□□□□ -1.71
SEC28YIL076W EKI1Q03764 534 aa4.37□□□□□ -1.71
SEC28YIL076W YOL057WQ08225 711 aa4.37□□□□□ -1.71
SEC28YIL076W YMR230W-AQ3E7B5 62 aa4.37□□□□□ -1.71
SEC28YIL076W NUC1P08466 329 aa4.36□□□□□ -1.71
SEC28YIL076W SEC1P30619 724 aaKnown RBP4.36□□□□□ -1.71
SEC28YIL076W SRB5P32585 307 aa4.36□□□□□ -1.71
SEC28YIL076W STV1P37296 890 aa4.36□□□□□ -1.71
SEC28YIL076W IFA38P38286 347 aa4.36□□□□□ -1.71
SEC28YIL076W MAK10Q02197 733 aa4.36□□□□□ -1.71
SEC28YIL076W MRPL13Q02204 264 aa4.36□□□□□ -1.71
SEC28YIL076W MTF2P10849 440 aa4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms