RNA–Protein interactions for RNA: YGL006W

PMC1, Transcript of Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions, yeast

Gene PMC1, Length 3,522 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMC1	YGL006W	UPF3	P48412	387 aa	Known RBP	4.24	□□□□□ -1.73
PMC1	YGL006W	RPL4B	P49626	362 aa	Known RBP	4.24	□□□□□ -1.73
PMC1	YGL006W	LIF1	P53150	421 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	COP1	P53622	1201 aa	Known RBP	4.24	□□□□□ -1.73
PMC1	YGL006W	RPL6A	Q02326	176 aa	Known RBP	4.24	□□□□□ -1.73
PMC1	YGL006W	FMP30	Q02883	468 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	MAK3	Q03503	176 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	FMP45	Q07651	309 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	THI21	Q08975	551 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	ARG81	P05085	880 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	MSS18	P08593	268 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	ATP7	P30902	174 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	MRS6	P32864	603 aa	Known RBP	4.24	□□□□□ -1.73
PMC1	YGL006W	UBP11	P36026	717 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	SEA4	P38164	1038 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	RIM11	P38615	370 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	GLG2	P47011	380 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	YJL045W	P47052	634 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	YGR053C	P53234	283 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	GLO2	Q05584	274 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	PDR8	Q06149	701 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	TRE2	Q08693	809 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
PMC1	YGL006W	HFI1	Q12060	488 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	YLL056C	Q12177	298 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	HSH49	Q99181	213 aa	Predicted RBP	4.24	□□□□□ -1.73
PMC1	YGL006W	KSS1	P14681	368 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	NMT1	P14743	455 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	MAP2	P38174	421 aa	Known RBP	4.24	□□□□□ -1.73
PMC1	YGL006W	ATG12	P38316	186 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	YHR112C	P38716	378 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	YHR131C	P38835	850 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	CYC2	P38909	366 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	EAF5	P39995	279 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	FCY21	P40039	528 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	ALD5	P40047	520 aa	Known RBP	4.24	□□□□□ -1.73
PMC1	YGL006W	SKP2	P42843	763 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	LYS4	P49367	693 aa	Predicted RBP	4.24	□□□□□ -1.73
PMC1	YGL006W	IMD3	P50095	523 aa	Known RBP	4.24	□□□□□ -1.73
PMC1	YGL006W	ZRG17	P53735	605 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	SWP1	Q02795	286 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	HSP31	Q04432	237 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	FMP42	Q04991	504 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	ENT2	Q05785	613 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	MDM36	Q06820	579 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	YDL114W	Q07530	308 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	CUE5	Q08412	411 aa	Known RBP	4.24	□□□□□ -1.73
PMC1	YGL006W	ZPS1	Q12512	249 aa		4.24	□□□□□ -1.73
PMC1	YGL006W	FAS2	P19097	1887 aa	Known RBP	4.23	□□□□□ -1.73
PMC1	YGL006W	ASF2	P32448	525 aa	Predicted RBP	4.23	□□□□□ -1.73
PMC1	YGL006W	UTR2	P32623	467 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	RGT1	P32862	1170 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	GLG1	P36143	616 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	UTP30	P36144	274 aa	Known RBP	4.23	□□□□□ -1.73
PMC1	YGL006W	PIM1	P36775	1133 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	CTP1	P38152	299 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	OTU2	P38747	307 aa	Known RBP	4.23	□□□□□ -1.73
PMC1	YGL006W	SNZ3	P43545	298 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	RTT102	P53330	157 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	SNZ2	P53824	298 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	GRX5	Q02784	150 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	TRM12	Q04235	462 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	KAP95	Q06142	861 aa	Known RBP	4.23	□□□□□ -1.73
PMC1	YGL006W	RTT10	Q08924	1013 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	PCL8	Q08966	492 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	VPS54	Q12071	889 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	AI5_BETA	Q9ZZX0	354 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
PMC1	YGL006W	YCR015C	P25616	317 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	BEM1	P29366	551 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	PRP19	P32523	503 aa	Known RBP	4.23	□□□□□ -1.73
PMC1	YGL006W	CDC5	P32562	705 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	WHI3	P34761	661 aa	Known RBP	4.23	□□□□□ -1.73
PMC1	YGL006W	YPK3	P38070	525 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	GRS1	P38088	690 aa	Known RBP	4.23	□□□□□ -1.73
PMC1	YGL006W	GUA1	P38625	525 aa	Known RBP	4.23	□□□□□ -1.73
PMC1	YGL006W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
PMC1	YGL006W	VHR2	P40041	505 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	JLP2	P40206	208 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	GCD10	P41814	478 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	GUF1	P46943	645 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	BIO3	P50277	480 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	PSP1	P50896	841 aa	Known RBP	4.23	□□□□□ -1.73
PMC1	YGL006W	BCH1	Q05029	724 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	PHM6	Q05637	104 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	ACK1	Q07622	623 aa	Predicted RBP	4.23	□□□□□ -1.73
PMC1	YGL006W	TPO1	Q07824	586 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	AIM39	Q08223	395 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	YIG1	Q08956	461 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	MED2	Q12124	431 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	TY3A-G	Q12173	290 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	TY3A-I	Q99219	290 aa		4.23	□□□□□ -1.73
PMC1	YGL006W	GAL10	P04397	699 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	PDE2	P06776	526 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	TCP1	P12612	559 aa	Known RBP	4.22	□□□□□ -1.73
PMC1	YGL006W	SYN8	P31377	255 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	ARO7	P32178	256 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	TMT1	P32643	299 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	SRB2	P34162	210 aa		4.22	□□□□□ -1.73
PMC1	YGL006W	PHO88	P38264	188 aa	Predicted RBP	4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms