RNA–Protein interactions for RNA: YER161C

SPT2, Transcript of Protein involved in negative regulation of transcription, yeast

Gene SPT2, Length 1,002 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT2	YER161C	RPN2	P32565	945 aa	Known RBP	3.56	□□□□□ -1.84
SPT2	YER161C	SMI1	P32566	505 aa		3.56	□□□□□ -1.84
SPT2	YER161C	FTH1	P38310	465 aa		3.56	□□□□□ -1.84
SPT2	YER161C	ECM1	P39715	212 aa		3.56	□□□□□ -1.84
SPT2	YER161C	FLC2	P39719	783 aa		3.56	□□□□□ -1.84
SPT2	YER161C	AFG3	P39925	761 aa		3.56	□□□□□ -1.84
SPT2	YER161C	YEL020C	P39994	560 aa		3.56	□□□□□ -1.84
SPT2	YER161C	JHD1	P40034	492 aa		3.56	□□□□□ -1.84
SPT2	YER161C	DJP1	P40564	432 aa		3.56	□□□□□ -1.84
SPT2	YER161C	BIT61	P47041	543 aa		3.56	□□□□□ -1.84
SPT2	YER161C	MDE1	P47095	244 aa		3.56	□□□□□ -1.84
SPT2	YER161C	TAM41	P53230	385 aa		3.56	□□□□□ -1.84
SPT2	YER161C	NCS2	P53923	493 aa	Predicted RBP	3.56	□□□□□ -1.84
SPT2	YER161C	YPL108W	Q02872	168 aa	Predicted RBP	3.56	□□□□□ -1.84
SPT2	YER161C	CTK1	Q03957	528 aa	Known RBP	3.56	□□□□□ -1.84
SPT2	YER161C	AIM41	Q12032	185 aa		3.56	□□□□□ -1.84
SPT2	YER161C	RIM20	Q12033	661 aa		3.56	□□□□□ -1.84
SPT2	YER161C	NUS1	Q12063	375 aa		3.56	□□□□□ -1.84
SPT2	YER161C	ERG27	Q12452	347 aa	Known RBP	3.56	□□□□□ -1.84
SPT2	YER161C	ESP1	Q03018	1630 aa		3.55	□□□□□ -1.84
SPT2	YER161C	BPT1	P14772	1559 aa		3.55	□□□□□ -1.84
SPT2	YER161C	RPB2	P08518	1224 aa	Known RBP	3.55	□□□□□ -1.84
SPT2	YER161C	VMA2	P16140	517 aa	Known RBP	3.55	□□□□□ -1.84
SPT2	YER161C	TUP1	P16649	713 aa		3.55	□□□□□ -1.84
SPT2	YER161C	CLB1	P24868	471 aa		3.55	□□□□□ -1.84
SPT2	YER161C	KIN82	P25341	720 aa		3.55	□□□□□ -1.84
SPT2	YER161C	RRP7	P25368	297 aa	Predicted RBP	3.55	□□□□□ -1.84
SPT2	YER161C	PRP45	P28004	379 aa	Predicted RBP	3.55	□□□□□ -1.84
SPT2	YER161C	PRE2	P30656	287 aa	Known RBP	3.55	□□□□□ -1.84
SPT2	YER161C	MGM1	P32266	881 aa		3.55	□□□□□ -1.84
SPT2	YER161C	CRG1	P38892	291 aa	RIP-Chip data	3.55	□□□□□ -1.84	not detected
SPT2	YER161C	FTR1	P40088	404 aa		3.55	□□□□□ -1.84
SPT2	YER161C	SPO1	P53541	631 aa		3.55	□□□□□ -1.84
SPT2	YER161C	RCO1	Q04779	684 aa		3.55	□□□□□ -1.84
SPT2	YER161C	THI22	Q06490	572 aa		3.55	□□□□□ -1.84
SPT2	YER161C	PNO1	Q99216	274 aa	Known RBP	3.55	□□□□□ -1.84
SPT2	YER161C	PWP1	P21304	576 aa	Known RBP	3.54	□□□□□ -1.84
SPT2	YER161C	REC107	P21651	314 aa		3.54	□□□□□ -1.84
SPT2	YER161C	CAP1	P28495	268 aa	Known RBP	3.54	□□□□□ -1.84
SPT2	YER161C	UBP11	P36026	717 aa		3.54	□□□□□ -1.84
SPT2	YER161C	GLG1	P36143	616 aa		3.54	□□□□□ -1.84
SPT2	YER161C	LAS1	P36146	502 aa	Predicted RBP	3.54	□□□□□ -1.84
SPT2	YER161C	MAL33	P38157	468 aa		3.54	□□□□□ -1.84
SPT2	YER161C	CDS1	P38221	457 aa		3.54	□□□□□ -1.84
SPT2	YER161C	BDH2	P39713	417 aa		3.54	□□□□□ -1.84
SPT2	YER161C	YEL057C	P39983	233 aa		3.54	□□□□□ -1.84
SPT2	YER161C	ARB1	P40024	610 aa	Known RBP	3.54	□□□□□ -1.84
SPT2	YER161C	GID8	P40208	455 aa		3.54	□□□□□ -1.84
SPT2	YER161C	CTR1	P49573	406 aa		3.54	□□□□□ -1.84
SPT2	YER161C	MCM21	Q06675	368 aa		3.54	□□□□□ -1.84
SPT2	YER161C	RIX7	Q07844	837 aa	Known RBP	3.54	□□□□□ -1.84
SPT2	YER161C	DIA2	Q08496	732 aa	Predicted RBP	3.54	□□□□□ -1.84
SPT2	YER161C	TCO89	Q08921	799 aa		3.54	□□□□□ -1.84
SPT2	YER161C	REX3	Q12090	404 aa		3.54	□□□□□ -1.84
SPT2	YER161C	NMD4	Q12129	218 aa		3.54	□□□□□ -1.84
SPT2	YER161C	GRX6	Q12438	231 aa		3.54	□□□□□ -1.84
SPT2	YER161C	RPC40	P07703	335 aa	Known RBP	3.53	□□□□□ -1.84
SPT2	YER161C	APE1	P14904	514 aa		3.53	□□□□□ -1.84
SPT2	YER161C	PAP1	P29468	568 aa	Known RBP	3.53	□□□□□ -1.84
SPT2	YER161C	TFB1	P32776	642 aa		3.53	□□□□□ -1.84
SPT2	YER161C	SMF1	P38925	575 aa		3.53	□□□□□ -1.84
SPT2	YER161C	RGI2	P40188	164 aa		3.53	□□□□□ -1.84
SPT2	YER161C	ARG2	P40360	574 aa		3.53	□□□□□ -1.84
SPT2	YER161C	YIL161W	P40449	235 aa	Known RBP	3.53	□□□□□ -1.84
SPT2	YER161C	EFM4	P40516	257 aa		3.53	□□□□□ -1.84
SPT2	YER161C	MAF1	P41910	395 aa		3.53	□□□□□ -1.84
SPT2	YER161C	IDS2	P46958	469 aa		3.53	□□□□□ -1.84
SPT2	YER161C	NOP9	P47077	666 aa	Known RBP	3.53	□□□□□ -1.84
SPT2	YER161C	YDL183C	P48569	320 aa		3.53	□□□□□ -1.84
SPT2	YER161C	ASE1	P50275	885 aa		3.53	□□□□□ -1.84
SPT2	YER161C	OCA1	P50946	238 aa	Predicted RBP	3.53	□□□□□ -1.84
SPT2	YER161C	VPS4	P52917	437 aa		3.53	□□□□□ -1.84
SPT2	YER161C	CUL3	P53202	744 aa		3.53	□□□□□ -1.84
SPT2	YER161C	PIL1	P53252	339 aa	Known RBP	3.53	□□□□□ -1.84
SPT2	YER161C	NNF2	P53253	936 aa		3.53	□□□□□ -1.84
SPT2	YER161C	CSL4	P53859	292 aa	Predicted RBP	3.53	□□□□□ -1.84
SPT2	YER161C	ATG4	P53867	494 aa		3.53	□□□□□ -1.84
SPT2	YER161C	BNI5	P53890	448 aa	Known RBP	3.53	□□□□□ -1.84
SPT2	YER161C	EOS1	P53938	366 aa		3.53	□□□□□ -1.84
SPT2	YER161C	ADA2	Q02336	434 aa		3.53	□□□□□ -1.84
SPT2	YER161C	YPL107W	Q02873	248 aa		3.53	□□□□□ -1.84
SPT2	YER161C	HMO1	Q03973	246 aa	Known RBP	3.53	□□□□□ -1.84
SPT2	YER161C	RSF1	Q05043	376 aa		3.53	□□□□□ -1.84
SPT2	YER161C	YLR456W	Q06199	204 aa		3.53	□□□□□ -1.84
SPT2	YER161C	RRP9	Q06506	573 aa	Known RBP	3.53	□□□□□ -1.84
SPT2	YER161C	VAM6	Q07468	1049 aa		3.53	□□□□□ -1.84
SPT2	YER161C	FMP45	Q07651	309 aa		3.53	□□□□□ -1.84
SPT2	YER161C	AIM6	Q07716	390 aa		3.53	□□□□□ -1.84
SPT2	YER161C	KEL3	Q08979	651 aa	Predicted RBP	3.53	□□□□□ -1.84
SPT2	YER161C	GPM3	Q12326	303 aa		3.53	□□□□□ -1.84
SPT2	YER161C	POM34	Q12445	299 aa		3.53	□□□□□ -1.84
SPT2	YER161C	AFI1	Q99222	893 aa		3.53	□□□□□ -1.84
SPT2	YER161C	MYO2	P19524	1574 aa	Known RBP	3.53	□□□□□ -1.84
SPT2	YER161C	BIK1	P11709	440 aa		3.52	□□□□□ -1.85
SPT2	YER161C	KAR3	P17119	729 aa		3.52	□□□□□ -1.85
SPT2	YER161C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.52	□□□□□ -1.85	not detected
SPT2	YER161C	YCR051W	P25631	222 aa		3.52	□□□□□ -1.85
SPT2	YER161C	UBP13	P38187	747 aa		3.52	□□□□□ -1.85
SPT2	YER161C	COS111	P38308	924 aa		3.52	□□□□□ -1.85
SPT2	YER161C	PCL7	P40186	285 aa		3.52	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms