RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W HEK2P38199 381 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
SHC1YER096W DUN1P39009 513 aa7.85□□□□□ -1.15
SHC1YER096W MNN1P39106 762 aa7.85□□□□□ -1.15
SHC1YER096W DOT6P40059 670 aaKnown RBP7.85□□□□□ -1.15
SHC1YER096W RMD8P43620 662 aa7.85□□□□□ -1.15
SHC1YER096W FAR3P46671 204 aa7.85□□□□□ -1.15
SHC1YER096W NUP42P49686 430 aaKnown RBP7.85□□□□□ -1.15
SHC1YER096W EMC4P53073 190 aa7.85□□□□□ -1.15
SHC1YER096W AIM14P53109 570 aa7.85□□□□□ -1.15
SHC1YER096W NOP15P53927 220 aaPredicted RBP7.85□□□□□ -1.15
SHC1YER096W RSC4Q02206 625 aa7.85□□□□□ -1.15
SHC1YER096W VPS16Q03308 798 aa7.85□□□□□ -1.15
SHC1YER096W YDR131CQ03899 556 aa7.85□□□□□ -1.15
SHC1YER096W YHM2Q04013 314 aa7.85□□□□□ -1.15
SHC1YER096W RPN9Q04062 393 aaKnown RBP7.85□□□□□ -1.15
SHC1YER096W TAF11Q04226 346 aa7.85□□□□□ -1.15
SHC1YER096W YPL225WQ08971 146 aaKnown RBP7.85□□□□□ -1.15
SHC1YER096W MRH1Q12117 320 aaPredicted RBP7.85□□□□□ -1.15
SHC1YER096W PDH1Q12428 516 aaKnown RBP7.85□□□□□ -1.15
SHC1YER096W KEX2P13134 814 aa7.84□□□□□ -1.15
SHC1YER096W KIN3P22209 435 aa7.84□□□□□ -1.15
SHC1YER096W ARG1P22768 420 aa7.84□□□□□ -1.15
SHC1YER096W VRP1P37370 817 aa7.84□□□□□ -1.15
SHC1YER096W MED6P38782 295 aa7.84□□□□□ -1.15
SHC1YER096W TIM17P39515 158 aa7.84□□□□□ -1.15
SHC1YER096W YJR061WP40355 935 aa7.84□□□□□ -1.15
SHC1YER096W OYE3P41816 400 aaPredicted RBP7.84□□□□□ -1.15
SHC1YER096W AIM23P47015 356 aa7.84□□□□□ -1.15
SHC1YER096W AIF1P52923 378 aa7.84□□□□□ -1.15
SHC1YER096W TAF6P53040 516 aa7.84□□□□□ -1.15
SHC1YER096W ARP4P80428 489 aa7.84□□□□□ -1.15
SHC1YER096W YML119WQ03208 357 aa7.84□□□□□ -1.15
SHC1YER096W YMR155WQ03795 547 aa7.84□□□□□ -1.15
SHC1YER096W YLR177WQ06251 628 aa7.84□□□□□ -1.15
SHC1YER096W ENT4Q07872 247 aa7.84□□□□□ -1.15
SHC1YER096W YPT6Q99260 215 aa7.84□□□□□ -1.15
SHC1YER096W PRP4P20053 465 aaKnown RBP7.83□□□□□ -1.16
SHC1YER096W PYC2P32327 1180 aaKnown RBP7.83□□□□□ -1.16
SHC1YER096W ERP5P38819 212 aa7.83□□□□□ -1.16
SHC1YER096W YHR182WP38870 785 aa7.83□□□□□ -1.16
SHC1YER096W RGI2P40188 164 aa7.83□□□□□ -1.16
SHC1YER096W TMA22P47089 198 aaPredicted RBP7.83□□□□□ -1.16
SHC1YER096W PRM1P53835 661 aa7.83□□□□□ -1.16
SHC1YER096W YDR338CQ05497 695 aa7.83□□□□□ -1.16
SHC1YER096W CRN1Q06440 651 aa7.83□□□□□ -1.16
SHC1YER096W MCP2Q06567 569 aa7.83□□□□□ -1.16
SHC1YER096W TRE2Q08693 809 aa7.83□□□□□ -1.16
SHC1YER096W NUS1Q12063 375 aa7.83□□□□□ -1.16
SHC1YER096W UBX3Q12229 455 aa7.83□□□□□ -1.16
SHC1YER096W YPL247CQ12523 523 aa7.83□□□□□ -1.16
SHC1YER096W YOL087CQ99247 1116 aa7.83□□□□□ -1.16
SHC1YER096W YPR089WO13585 888 aa7.83□□□□□ -1.16
SHC1YER096W SEC53P07283 254 aaKnown RBP7.83□□□□□ -1.16
SHC1YER096W CLB1P24868 471 aa7.83□□□□□ -1.16
SHC1YER096W VAC17P25591 423 aa7.83□□□□□ -1.16
SHC1YER096W GUT2P32191 649 aa7.83□□□□□ -1.16
SHC1YER096W LRG1P35688 1017 aa7.83□□□□□ -1.16
SHC1YER096W ASK1P35734 292 aa7.83□□□□□ -1.16
SHC1YER096W LDB7P38210 180 aa7.83□□□□□ -1.16
SHC1YER096W RFC3P38629 340 aa7.83□□□□□ -1.16
SHC1YER096W MNT2P53059 558 aa7.83□□□□□ -1.16
SHC1YER096W YTP1P53584 459 aa7.83□□□□□ -1.16
SHC1YER096W RCF2P53721 224 aa7.83□□□□□ -1.16
SHC1YER096W FRE4P53746 719 aa7.83□□□□□ -1.16
SHC1YER096W EFM6P53970 246 aa7.83□□□□□ -1.16
SHC1YER096W TVP15Q03860 143 aa7.83□□□□□ -1.16
SHC1YER096W YPR114WQ06107 315 aa7.83□□□□□ -1.16
SHC1YER096W YOR238WQ08634 303 aa7.83□□□□□ -1.16
SHC1YER096W EMC1P25574 760 aa7.82□□□□□ -1.16
SHC1YER096W CTF13P35203 478 aa7.82□□□□□ -1.16
SHC1YER096W SRP72P38688 640 aaKnown RBP7.82□□□□□ -1.16
SHC1YER096W STN1P38960 494 aa7.82□□□□□ -1.16
SHC1YER096W YNL143CP53908 130 aa7.82□□□□□ -1.16
SHC1YER096W ORC3P54790 616 aa7.82□□□□□ -1.16
SHC1YER096W RAD3P06839 778 aa7.81□□□□□ -1.16
SHC1YER096W PMA2P19657 947 aa7.81□□□□□ -1.16
SHC1YER096W NPP1P25353 742 aa7.81□□□□□ -1.16
SHC1YER096W SNT1P25357 1226 aa7.81□□□□□ -1.16
SHC1YER096W RPC19P28000 142 aaKnown RBP7.81□□□□□ -1.16
SHC1YER096W MVD1P32377 396 aaKnown RBP7.81□□□□□ -1.16
SHC1YER096W TOM20P35180 183 aa7.81□□□□□ -1.16
SHC1YER096W MUP3P38734 546 aa7.81□□□□□ -1.16
SHC1YER096W ACO2P39533 789 aa7.81□□□□□ -1.16
SHC1YER096W ALG8P40351 577 aa7.81□□□□□ -1.16
SHC1YER096W IST1P53843 298 aaPredicted RBP7.81□□□□□ -1.16
SHC1YER096W YNL058CP53947 316 aa7.81□□□□□ -1.16
SHC1YER096W SPP2Q02521 185 aa7.81□□□□□ -1.16
SHC1YER096W YPL109CQ02981 657 aa7.81□□□□□ -1.16
SHC1YER096W YDR109CQ04585 715 aa7.81□□□□□ -1.16
SHC1YER096W ADY3Q07732 790 aa7.81□□□□□ -1.16
SHC1YER096W OSW1Q08692 278 aa7.81□□□□□ -1.16
SHC1YER096W ICT1Q12385 394 aa7.81□□□□□ -1.16
SHC1YER096W RPS14AP06367 137 aaKnown RBP7.8□□□□□ -1.16
SHC1YER096W RHO2P06781 192 aa7.8□□□□□ -1.16
SHC1YER096W PMR1P13586 950 aa7.8□□□□□ -1.16
SHC1YER096W BET2P20133 325 aa7.8□□□□□ -1.16
SHC1YER096W TRX2P22803 104 aaKnown RBP7.8□□□□□ -1.16
SHC1YER096W SGF29P25554 259 aa7.8□□□□□ -1.16
SHC1YER096W YJU3P28321 313 aa7.8□□□□□ -1.16
SHC1YER096W SFP1P32432 683 aa7.8□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms