RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W NPR2P39923 615 aa3.74□□□□□ -1.81
PRE1YER012W DOT5P40553 215 aa3.74□□□□□ -1.81
PRE1YER012W RPN11P43588 306 aaKnown RBP3.74□□□□□ -1.81
PRE1YER012W LYS4P49367 693 aaPredicted RBP3.74□□□□□ -1.81
PRE1YER012W VPS64Q03944 604 aa3.74□□□□□ -1.81
PRE1YER012W ECM16Q04217 1267 aaKnown RBP3.74□□□□□ -1.81
PRE1YER012W YLR112WQ12130 139 aa3.74□□□□□ -1.81
PRE1YER012W YML133CQ03099 1374 aa3.74□□□□□ -1.81
PRE1YER012W YLL067CQ07888 1374 aa3.74□□□□□ -1.81
PRE1YER012W YLL066CQ99208 1374 aa3.74□□□□□ -1.81
PRE1YER012W YFL068WP0CX99 160 aa3.73□□□□□ -1.81
PRE1YER012W YLL066W-AP0CY00 160 aa3.73□□□□□ -1.81
PRE1YER012W YLL067W-AP0CY01 160 aa3.73□□□□□ -1.81
PRE1YER012W NIC96P34077 839 aa3.73□□□□□ -1.81
PRE1YER012W SWD1P39706 426 aa3.73□□□□□ -1.81
PRE1YER012W CDC1P40986 491 aa3.73□□□□□ -1.81
PRE1YER012W PDR8Q06149 701 aa3.73□□□□□ -1.81
PRE1YER012W ADE6P38972 1358 aaKnown RBP3.73□□□□□ -1.81
PRE1YER012W APC1P53886 1748 aa3.73□□□□□ -1.81
PRE1YER012W SAW1P39735 261 aa3.72□□□□□ -1.81
PRE1YER012W YGL260WP53056 76 aa3.72□□□□□ -1.81
PRE1YER012W YGR079WP53249 370 aa3.72□□□□□ -1.81
PRE1YER012W IZH1Q03419 316 aa3.72□□□□□ -1.81
PRE1YER012W YTH1Q06102 208 aaPredicted RBP3.72□□□□□ -1.81
PRE1YER012W AIM6Q07716 390 aa3.72□□□□□ -1.81
PRE1YER012W PSK1P31374 1356 aa3.72□□□□□ -1.81
PRE1YER012W LAC1P28496 418 aa3.71□□□□□ -1.82
PRE1YER012W VPS41P38959 992 aa3.71□□□□□ -1.82
PRE1YER012W YGL081WP53156 320 aa3.71□□□□□ -1.82
PRE1YER012W GRS2Q06817 618 aa3.71□□□□□ -1.82
PRE1YER012W AAD4Q07747 329 aa3.71□□□□□ -1.82
PRE1YER012W YER145C-AA0A023PYF4 145 aa3.7□□□□□ -1.82
PRE1YER012W PDE1P22434 369 aa3.7□□□□□ -1.82
PRE1YER012W YCR006CP25350 157 aa3.7□□□□□ -1.82
PRE1YER012W PAF1P38351 445 aa3.7□□□□□ -1.82
PRE1YER012W HOS2P53096 452 aaPredicted RBP3.7□□□□□ -1.82
PRE1YER012W RIM15P43565 1770 aa3.7□□□□□ -1.82
PRE1YER012W SNF2P22082 1703 aa3.7□□□□□ -1.82
PRE1YER012W OCT1P35999 772 aa3.69□□□□□ -1.82
PRE1YER012W SAD1P43589 448 aa3.69□□□□□ -1.82
PRE1YER012W VPS25P47142 202 aa3.69□□□□□ -1.82
PRE1YER012W ASK10P48361 1146 aa3.69□□□□□ -1.82
PRE1YER012W CEG1Q01159 459 aaPredicted RBP3.69□□□□□ -1.82
PRE1YER012W CRD1Q07560 283 aa3.69□□□□□ -1.82
PRE1YER012W MCH4Q08268 501 aa3.69□□□□□ -1.82
PRE1YER012W FRE3Q08905 711 aa3.69□□□□□ -1.82
PRE1YER012W RPS24AP0CX31 135 aaKnown RBP3.68□□□□□ -1.82
PRE1YER012W RPS24BP0CX32 135 aaKnown RBP3.68□□□□□ -1.82
PRE1YER012W SDS22P36047 338 aa3.68□□□□□ -1.82
PRE1YER012W FUN12P39730 1002 aaKnown RBP3.68□□□□□ -1.82
PRE1YER012W QRI7P43122 407 aa3.68□□□□□ -1.82
PRE1YER012W PUS4P48567 403 aaKnown RBP3.68□□□□□ -1.82
PRE1YER012W FOL1P53848 824 aa3.68□□□□□ -1.82
PRE1YER012W BET4Q00618 327 aa3.68□□□□□ -1.82
PRE1YER012W YDR109CQ04585 715 aa3.68□□□□□ -1.82
PRE1YER012W SPE2P21182 396 aa3.67□□□□□ -1.82
PRE1YER012W MNN2P38069 597 aa3.67□□□□□ -1.82
PRE1YER012W YLF2P38746 405 aa3.67□□□□□ -1.82
PRE1YER012W YND1P40009 630 aa3.67□□□□□ -1.82
PRE1YER012W UBX6P47049 396 aa3.67□□□□□ -1.82
PRE1YER012W MAD3P47074 515 aa3.67□□□□□ -1.82
PRE1YER012W TAM41P53230 385 aa3.67□□□□□ -1.82
PRE1YER012W DOS2P54858 310 aa3.67□□□□□ -1.82
PRE1YER012W SLM3Q12093 417 aa3.67□□□□□ -1.82
PRE1YER012W YBR255C-AQ3E776 120 aa3.67□□□□□ -1.82
PRE1YER012W YOR111WQ99210 232 aa3.67□□□□□ -1.82
PRE1YER012W RSF2P46974 1380 aa3.66□□□□□ -1.82
PRE1YER012W PHO2P07269 559 aa3.66□□□□□ -1.82
PRE1YER012W FMP46P36141 133 aaKnown RBP3.66□□□□□ -1.82
PRE1YER012W ESL2P36168 1195 aa3.66□□□□□ -1.82
PRE1YER012W ASG1P40467 964 aa3.66□□□□□ -1.82
PRE1YER012W CNM67P53865 581 aaKnown RBP3.66□□□□□ -1.82
PRE1YER012W ESBP6P53918 673 aa3.66□□□□□ -1.82
PRE1YER012W IOC4Q04213 475 aa3.66□□□□□ -1.82
PRE1YER012W YMR317WQ04893 1140 aa3.66□□□□□ -1.82
PRE1YER012W PIG1Q06216 648 aa3.66□□□□□ -1.82
PRE1YER012W YLR419WQ06698 1435 aaKnown RBP3.66□□□□□ -1.82
PRE1YER012W YRF1-4O13559 1382 aa3.65□□□□□ -1.82
PRE1YER012W GPA1P08539 472 aa3.65□□□□□ -1.83
PRE1YER012W PPZ1P26570 692 aa3.65□□□□□ -1.83
PRE1YER012W SWC3P31376 625 aa3.65□□□□□ -1.83
PRE1YER012W HES1P35843 434 aa3.65□□□□□ -1.83
PRE1YER012W TPA1P40032 644 aaKnown RBP3.65□□□□□ -1.83
PRE1YER012W VRG4P40107 337 aa3.65□□□□□ -1.83
PRE1YER012W EAF7P53911 425 aaKnown RBP3.65□□□□□ -1.83
PRE1YER012W STP3Q05937 343 aa3.65□□□□□ -1.83
PRE1YER012W YMR230W-AQ3E7B5 62 aa3.65□□□□□ -1.83
PRE1YER012W SWI4P25302 1093 aaKnown RBP3.64□□□□□ -1.83
PRE1YER012W FRD1P32614 470 aaKnown RBP3.64□□□□□ -1.83
PRE1YER012W SCW10Q04951 389 aa3.64□□□□□ -1.83
PRE1YER012W AUS1Q08409 1394 aa3.63□□□□□ -1.83
PRE1YER012W MLP1Q02455 1875 aaKnown RBP3.63□□□□□ -1.83
PRE1YER012W NOP1P15646 327 aaKnown RBP3.63□□□□□ -1.83
PRE1YER012W URK1P27515 501 aa3.63□□□□□ -1.83
PRE1YER012W STT3P39007 718 aaKnown RBP3.63□□□□□ -1.83
PRE1YER012W PCL6P40038 420 aa3.63□□□□□ -1.83
PRE1YER012W ADE16P54113 591 aaKnown RBP3.63□□□□□ -1.83
PRE1YER012W FMP42Q04991 504 aa3.63□□□□□ -1.83
PRE1YER012W ARP9Q05123 467 aa3.63□□□□□ -1.83
PRE1YER012W POS5Q06892 414 aa3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms