RNA–Protein interactions for RNA: YDR486C

VPS60, Transcript of Protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS60, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS60YDR486C YGL140CP53120 1219 aa10.78□□□□□ -0.68
VPS60YDR486C VAC7P53950 1165 aa10.78□□□□□ -0.68
VPS60YDR486C MRS2Q01926 470 aa10.78□□□□□ -0.68
VPS60YDR486C YLR177WQ06251 628 aa10.78□□□□□ -0.68
VPS60YDR486C MPD2Q99316 277 aa10.78□□□□□ -0.68
VPS60YDR486C YMR085WP0CF18 432 aa10.77□□□□□ -0.69
VPS60YDR486C IRS4P36115 615 aaKnown RBP10.77□□□□□ -0.69
VPS60YDR486C YIR007WP40566 764 aa10.77□□□□□ -0.69
VPS60YDR486C RSM7P47150 247 aa10.77□□□□□ -0.69
VPS60YDR486C YJR124CP47159 448 aa10.77□□□□□ -0.69
VPS60YDR486C ATH1P48016 1211 aa10.77□□□□□ -0.69
VPS60YDR486C YNL143CP53908 130 aa10.77□□□□□ -0.69
VPS60YDR486C MAP1Q01662 387 aaKnown RBP RIP-Chip data10.77□□□□□ -0.69not detected
VPS60YDR486C TAF11Q04226 346 aa10.77□□□□□ -0.69
VPS60YDR486C NSE1Q07913 336 aa10.77□□□□□ -0.69
VPS60YDR486C SPE4Q12455 300 aa10.77□□□□□ -0.69
VPS60YDR486C STE2D6VTK4 431 aa10.76□□□□□ -0.69
VPS60YDR486C CDC10P25342 322 aaKnown RBP10.76□□□□□ -0.69
VPS60YDR486C YCR099CP25657 155 aa10.76□□□□□ -0.69
VPS60YDR486C GUT2P32191 649 aa10.76□□□□□ -0.69
VPS60YDR486C PHA2P32452 334 aa10.76□□□□□ -0.69
VPS60YDR486C LDB7P38210 180 aa10.76□□□□□ -0.69
VPS60YDR486C GDT1P38301 280 aaPredicted RBP10.76□□□□□ -0.69
VPS60YDR486C PHO89P38361 574 aa10.76□□□□□ -0.69
VPS60YDR486C YHR182WP38870 785 aa10.76□□□□□ -0.69
VPS60YDR486C ACO2P39533 789 aa10.76□□□□□ -0.69
VPS60YDR486C OSW5P40219 148 aa10.76□□□□□ -0.69
VPS60YDR486C ALG8P40351 577 aa10.76□□□□□ -0.69
VPS60YDR486C SEC28P40509 296 aaKnown RBP10.76□□□□□ -0.69
VPS60YDR486C GLG2P47011 380 aa10.76□□□□□ -0.69
VPS60YDR486C SPC105P53148 917 aa10.76□□□□□ -0.69
VPS60YDR486C YOR338WQ99326 363 aa10.76□□□□□ -0.69
VPS60YDR486C FRT1Q99332 602 aa10.76□□□□□ -0.69
VPS60YDR486C PYC2P32327 1180 aaKnown RBP10.75□□□□□ -0.69
VPS60YDR486C YSC84P32793 468 aa10.75□□□□□ -0.69
VPS60YDR486C RIM2P38127 377 aa10.75□□□□□ -0.69
VPS60YDR486C YJR061WP40355 935 aa10.75□□□□□ -0.69
VPS60YDR486C RCF2P53721 224 aa10.75□□□□□ -0.69
VPS60YDR486C YNR061CP53747 219 aa10.75□□□□□ -0.69
VPS60YDR486C HRK1Q08732 759 aaKnown RBP10.75□□□□□ -0.69
VPS60YDR486C NUS1Q12063 375 aa10.75□□□□□ -0.69
VPS60YDR486C CHS5Q12114 671 aaKnown RBP10.75□□□□□ -0.69
VPS60YDR486C SPS1P08458 490 aa10.74□□□□□ -0.69
VPS60YDR486C MPH2P0CD99 609 aa10.74□□□□□ -0.69
VPS60YDR486C FUS1P11710 512 aa10.74□□□□□ -0.69
VPS60YDR486C PHO3P24031 467 aa10.74□□□□□ -0.69
VPS60YDR486C MRPL9P31334 269 aa10.74□□□□□ -0.69
VPS60YDR486C SRP72P38688 640 aaKnown RBP10.74□□□□□ -0.69
VPS60YDR486C HAT2P39984 401 aa10.74□□□□□ -0.69
VPS60YDR486C GTS1P40956 396 aa10.74□□□□□ -0.69
VPS60YDR486C FAR3P46671 204 aa10.74□□□□□ -0.69
VPS60YDR486C NMA2P53204 395 aa10.74□□□□□ -0.69
VPS60YDR486C YNL058CP53947 316 aa10.74□□□□□ -0.69
VPS60YDR486C YDR131CQ03899 556 aa10.74□□□□□ -0.69
VPS60YDR486C CSN9Q03981 162 aa10.74□□□□□ -0.69
VPS60YDR486C BRF1P29056 596 aa10.73□□□□□ -0.69
VPS60YDR486C YSW1P38280 609 aa10.73□□□□□ -0.69
VPS60YDR486C YDR089WP38966 869 aa10.73□□□□□ -0.69
VPS60YDR486C MGS1P40151 587 aa10.73□□□□□ -0.69
VPS60YDR486C SER33P40510 469 aa10.73□□□□□ -0.69
VPS60YDR486C TAF6P53040 516 aa10.73□□□□□ -0.69
VPS60YDR486C IST1P53843 298 aaPredicted RBP10.73□□□□□ -0.69
VPS60YDR486C ARP4P80428 489 aa10.73□□□□□ -0.69
VPS60YDR486C PEX13P80667 386 aa10.73□□□□□ -0.69
VPS60YDR486C SPP2Q02521 185 aa10.73□□□□□ -0.69
VPS60YDR486C PPN1Q04119 674 aa10.73□□□□□ -0.69
VPS60YDR486C SHE9Q04172 456 aa10.73□□□□□ -0.69
VPS60YDR486C NUT2Q06213 157 aa10.73□□□□□ -0.69
VPS60YDR486C IRC10Q08118 586 aa10.73□□□□□ -0.69
VPS60YDR486C APC9Q12107 265 aa10.73□□□□□ -0.69
VPS60YDR486C UBR1P19812 1950 aa10.73□□□□□ -0.69
VPS60YDR486C TRX2P22803 104 aaKnown RBP10.72□□□□□ -0.69
VPS60YDR486C RRN3P36070 627 aa10.72□□□□□ -0.69
VPS60YDR486C YBR259WP38338 688 aa10.72□□□□□ -0.69
VPS60YDR486C RPH1P39956 796 aa10.72□□□□□ -0.69
VPS60YDR486C FRE4P53746 719 aa10.72□□□□□ -0.69
VPS60YDR486C YMR178WQ03219 274 aaKnown RBP10.72□□□□□ -0.69
VPS60YDR486C YMR155WQ03795 547 aa10.72□□□□□ -0.69
VPS60YDR486C HPT1Q04178 221 aaKnown RBP10.72□□□□□ -0.69
VPS60YDR486C MRH1Q12117 320 aaPredicted RBP10.72□□□□□ -0.69
VPS60YDR486C CET1O13297 549 aaPredicted RBP10.71□□□□□ -0.69
VPS60YDR486C RPS9AO13516 197 aaKnown RBP10.71□□□□□ -0.69
VPS60YDR486C ABF1P14164 731 aa10.71□□□□□ -0.69
VPS60YDR486C BAS1P22035 811 aa10.71□□□□□ -0.69
VPS60YDR486C UBA1P22515 1024 aaKnown RBP10.71□□□□□ -0.69
VPS60YDR486C HEM3P28789 327 aa10.71□□□□□ -0.69
VPS60YDR486C MF(ALPHA)2P32435 120 aa10.71□□□□□ -0.69
VPS60YDR486C ASK1P35734 292 aa10.71□□□□□ -0.69
VPS60YDR486C LRP1P38801 184 aaKnown RBP10.71□□□□□ -0.69
VPS60YDR486C TIM17P39515 158 aa10.71□□□□□ -0.69
VPS60YDR486C MRX1P40050 688 aa10.71□□□□□ -0.69
VPS60YDR486C IME4P41833 600 aa10.71□□□□□ -0.69
VPS60YDR486C LSB3P43603 459 aaKnown RBP10.71□□□□□ -0.69
VPS60YDR486C SET2P46995 733 aaKnown RBP10.71□□□□□ -0.69
VPS60YDR486C PET130P47065 347 aa10.71□□□□□ -0.69
VPS60YDR486C MAD3P47074 515 aa10.71□□□□□ -0.69
VPS60YDR486C BOL2P53082 120 aa10.71□□□□□ -0.69
VPS60YDR486C COG7P53195 279 aa10.71□□□□□ -0.69
VPS60YDR486C YML119WQ03208 357 aa10.71□□□□□ -0.69
VPS60YDR486C CRN1Q06440 651 aa10.71□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 64.9 ms