RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C TEX1P53851 422 aaKnown RBP3.55□□□□□ -1.84
CDC40YDR364C TIM10P87108 93 aa3.55□□□□□ -1.84
CDC40YDR364C ARA2Q04212 335 aa3.55□□□□□ -1.84
CDC40YDR364C YKU80Q04437 629 aa3.55□□□□□ -1.84
CDC40YDR364C YPL150WQ12152 901 aa3.55□□□□□ -1.84
CDC40YDR364C GPR1Q12361 961 aa3.55□□□□□ -1.84
CDC40YDR364C HIF1Q12373 385 aa3.55□□□□□ -1.84
CDC40YDR364C VPS5Q92331 675 aa3.55□□□□□ -1.84
CDC40YDR364C PMD1P32634 1753 aa3.55□□□□□ -1.84
CDC40YDR364C HSP82P02829 709 aaKnown RBP3.54□□□□□ -1.84
CDC40YDR364C ADE3P07245 946 aaKnown RBP3.54□□□□□ -1.84
CDC40YDR364C FUM1P08417 488 aaKnown RBP3.54□□□□□ -1.84
CDC40YDR364C MET8P15807 274 aa3.54□□□□□ -1.84
CDC40YDR364C HPR1P17629 752 aaKnown RBP3.54□□□□□ -1.84
CDC40YDR364C ACO1P19414 778 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
CDC40YDR364C RDS1P25611 832 aa3.54□□□□□ -1.84
CDC40YDR364C DHR2P36009 735 aaPredicted RBP3.54□□□□□ -1.84
CDC40YDR364C SET3P36124 751 aa3.54□□□□□ -1.84
CDC40YDR364C YBR138CP38277 524 aa3.54□□□□□ -1.84
CDC40YDR364C MAD2P40958 196 aa3.54□□□□□ -1.84
CDC40YDR364C GPD2P41911 440 aaKnown RBP3.54□□□□□ -1.84
CDC40YDR364C CIR1P42940 261 aa3.54□□□□□ -1.84
CDC40YDR364C STB2P46679 850 aa3.54□□□□□ -1.84
CDC40YDR364C NET1P47035 1189 aa3.54□□□□□ -1.84
CDC40YDR364C PIL1P53252 339 aaKnown RBP3.54□□□□□ -1.84
CDC40YDR364C YNR071CP53757 342 aa3.54□□□□□ -1.84
CDC40YDR364C RPT6Q01939 405 aaKnown RBP3.54□□□□□ -1.84
CDC40YDR364C SNO4Q04902 237 aa3.54□□□□□ -1.84
CDC40YDR364C STP4Q07351 490 aa3.54□□□□□ -1.84
CDC40YDR364C HSP33Q08914 237 aaKnown RBP3.54□□□□□ -1.84
CDC40YDR364C HSP32Q08992 237 aa3.54□□□□□ -1.84
CDC40YDR364C RGT2Q12300 763 aa3.54□□□□□ -1.84
CDC40YDR364C YKL033W-AQ86ZR7 236 aa3.54□□□□□ -1.84
CDC40YDR364C FRS1P15624 595 aaKnown RBP3.53□□□□□ -1.84
CDC40YDR364C SIR1P21691 654 aa3.53□□□□□ -1.84
CDC40YDR364C PRE8P23639 250 aa3.53□□□□□ -1.84
CDC40YDR364C PET127P32606 800 aa3.53□□□□□ -1.84
CDC40YDR364C APT2P36973 181 aa3.53□□□□□ -1.84
CDC40YDR364C MAL33P38157 468 aa3.53□□□□□ -1.84
CDC40YDR364C CST26P38226 397 aa3.53□□□□□ -1.84
CDC40YDR364C RXT2P38255 430 aa3.53□□□□□ -1.84
CDC40YDR364C RIC1P40395 1056 aa3.53□□□□□ -1.84
CDC40YDR364C PRM2P40534 656 aa3.53□□□□□ -1.84
CDC40YDR364C PXA1P41909 870 aa3.53□□□□□ -1.84
CDC40YDR364C BPL1P48445 690 aaPredicted RBP3.53□□□□□ -1.84
CDC40YDR364C PRP31P49704 494 aaPredicted RBP3.53□□□□□ -1.84
CDC40YDR364C TAF4P50105 388 aa3.53□□□□□ -1.84
CDC40YDR364C RRT6P53117 311 aaPredicted RBP3.53□□□□□ -1.84
CDC40YDR364C ATG4P53867 494 aa3.53□□□□□ -1.84
CDC40YDR364C MYO5Q04439 1219 aaKnown RBP3.53□□□□□ -1.84
CDC40YDR364C ETT1Q08421 412 aaKnown RBP3.53□□□□□ -1.84
CDC40YDR364C PCL8Q08966 492 aa3.53□□□□□ -1.84
CDC40YDR364C DIN7Q12086 430 aa3.53□□□□□ -1.84
CDC40YDR364C GET3Q12154 354 aaKnown RBP3.53□□□□□ -1.84
CDC40YDR364C SCM3Q12334 223 aa3.53□□□□□ -1.84
CDC40YDR364C SKM1Q12469 655 aa3.53□□□□□ -1.84
CDC40YDR364C SEM1O94742 89 aa3.52□□□□□ -1.85
CDC40YDR364C URA3P03962 267 aa3.52□□□□□ -1.85
CDC40YDR364C TPK1P06244 397 aa3.52□□□□□ -1.85
CDC40YDR364C CBP1P07252 654 aa3.52□□□□□ -1.85
CDC40YDR364C FRS2P15625 503 aaKnown RBP3.52□□□□□ -1.85
CDC40YDR364C MBR1P23493 339 aa3.52□□□□□ -1.85
CDC40YDR364C SAS3P34218 831 aa3.52□□□□□ -1.85
CDC40YDR364C YBL028CP38202 106 aa3.52□□□□□ -1.85
CDC40YDR364C RKM3P38222 552 aa3.52□□□□□ -1.85
CDC40YDR364C NPR3P38742 1146 aa3.52□□□□□ -1.85
CDC40YDR364C YLF2P38746 405 aa3.52□□□□□ -1.85
CDC40YDR364C CCT3P39077 534 aaKnown RBP3.52□□□□□ -1.85
CDC40YDR364C PES4P39684 611 aa3.52□□□□□ -1.85
CDC40YDR364C ECM1P39715 212 aa3.52□□□□□ -1.85
CDC40YDR364C YNL195CP40168 261 aa3.52□□□□□ -1.85
CDC40YDR364C ACS1Q01574 713 aa3.52□□□□□ -1.85
CDC40YDR364C MEH1Q02205 184 aa3.52□□□□□ -1.85
CDC40YDR364C RCR2Q03446 210 aaKnown RBP3.52□□□□□ -1.85
CDC40YDR364C RCF1Q03713 159 aa3.52□□□□□ -1.85
CDC40YDR364C PPN1Q04119 674 aa3.52□□□□□ -1.85
CDC40YDR364C VBA4Q04602 768 aaKnown RBP3.52□□□□□ -1.85
CDC40YDR364C YDR341CQ05506 607 aaKnown RBP3.52□□□□□ -1.85
CDC40YDR364C AAD4Q07747 329 aa3.52□□□□□ -1.85
CDC40YDR364C SLK19Q08581 821 aaKnown RBP3.52□□□□□ -1.85
CDC40YDR364C COX17Q12287 69 aa3.52□□□□□ -1.85
CDC40YDR364C CEX1Q12453 761 aa3.52□□□□□ -1.85
CDC40YDR364C YLR278CQ05854 1341 aa3.52□□□□□ -1.85
CDC40YDR364C ERG20P08524 352 aaKnown RBP3.51□□□□□ -1.85
CDC40YDR364C SPO16P17122 198 aa3.51□□□□□ -1.85
CDC40YDR364C SRP54P20424 541 aaKnown RBP3.51□□□□□ -1.85
CDC40YDR364C SEC15P22224 910 aa3.51□□□□□ -1.85
CDC40YDR364C CWH43P25618 953 aa3.51□□□□□ -1.85
CDC40YDR364C DBF4P32325 704 aa3.51□□□□□ -1.85
CDC40YDR364C RGT1P32862 1170 aa3.51□□□□□ -1.85
CDC40YDR364C RPS0AP32905 252 aaKnown RBP3.51□□□□□ -1.85
CDC40YDR364C SRP72P38688 640 aaKnown RBP3.51□□□□□ -1.85
CDC40YDR364C TOM71P38825 639 aaKnown RBP3.51□□□□□ -1.85
CDC40YDR364C VPS45P38932 577 aa3.51□□□□□ -1.85
CDC40YDR364C YER130CP39959 443 aa3.51□□□□□ -1.85
CDC40YDR364C CAB2P40506 365 aa3.51□□□□□ -1.85
CDC40YDR364C PCI8P40512 444 aa3.51□□□□□ -1.85
CDC40YDR364C BUD8P41698 603 aa3.51□□□□□ -1.85
CDC40YDR364C YGR117CP53270 476 aa3.51□□□□□ -1.85
CDC40YDR364C BSC5P53755 489 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms