RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	MAF1	P41910	395 aa		5.88	□□□□□ -1.47
SNF11	YDR073W	CTR1	P49573	406 aa		5.88	□□□□□ -1.47
SNF11	YDR073W	UBC11	P52492	156 aa		5.88	□□□□□ -1.47
SNF11	YDR073W	MRPL22	P53881	309 aa		5.88	□□□□□ -1.47
SNF11	YDR073W	ERG5	P54781	538 aa		5.88	□□□□□ -1.47
SNF11	YDR073W	DAK1	P54838	584 aa	Known RBP	5.88	□□□□□ -1.47
SNF11	YDR073W	USA1	Q03714	838 aa		5.88	□□□□□ -1.47
SNF11	YDR073W	MRD1	Q06106	887 aa	Known RBP	5.88	□□□□□ -1.47
SNF11	YDR073W	YSH1	Q06224	779 aa	Predicted RBP	5.88	□□□□□ -1.47
SNF11	YDR073W	FMP45	Q07651	309 aa		5.88	□□□□□ -1.47
SNF11	YDR073W	PRS5	Q12265	496 aa	Known RBP	5.88	□□□□□ -1.47
SNF11	YDR073W	AVL9	Q12500	764 aa		5.88	□□□□□ -1.47
SNF11	YDR073W	GAL80	P04387	435 aa		5.87	□□□□□ -1.47
SNF11	YDR073W	ARD1	P07347	238 aa	Predicted RBP	5.87	□□□□□ -1.47
SNF11	YDR073W	ABF1	P14164	731 aa		5.87	□□□□□ -1.47
SNF11	YDR073W	EST1	P17214	699 aa	Predicted RBP	5.87	□□□□□ -1.47
SNF11	YDR073W	FUB1	P25659	250 aa		5.87	□□□□□ -1.47
SNF11	YDR073W	URA7	P28274	579 aa	Known RBP	5.87	□□□□□ -1.47
SNF11	YDR073W	SWH1	P35845	1188 aa		5.87	□□□□□ -1.47
SNF11	YDR073W	FTH1	P38310	465 aa		5.87	□□□□□ -1.47
SNF11	YDR073W	RPS0B	P46654	252 aa	Known RBP	5.87	□□□□□ -1.47
SNF11	YDR073W	CTK2	P46962	323 aa		5.87	□□□□□ -1.47
SNF11	YDR073W	CUL3	P53202	744 aa		5.87	□□□□□ -1.47
SNF11	YDR073W	YAT1	P80235	687 aa		5.87	□□□□□ -1.47
SNF11	YDR073W	INA17	Q02888	182 aa		5.87	□□□□□ -1.47
SNF11	YDR073W	ROY1	Q04847	553 aa		5.87	□□□□□ -1.47
SNF11	YDR073W	RSF1	Q05043	376 aa		5.87	□□□□□ -1.47
SNF11	YDR073W	CRN1	Q06440	651 aa		5.87	□□□□□ -1.47
SNF11	YDR073W	ESC8	Q08119	714 aa		5.87	□□□□□ -1.47
SNF11	YDR073W	GPN2	Q08726	347 aa	Predicted RBP	5.87	□□□□□ -1.47
SNF11	YDR073W	YPL216W	Q08964	1102 aa		5.87	□□□□□ -1.47
SNF11	YDR073W	GPM3	Q12326	303 aa		5.87	□□□□□ -1.47
SNF11	YDR073W	YKL033W-A	Q86ZR7	236 aa		5.87	□□□□□ -1.47
SNF11	YDR073W	CPR2	P23285	205 aa		5.86	□□□□□ -1.47
SNF11	YDR073W	SYN8	P31377	255 aa		5.86	□□□□□ -1.47
SNF11	YDR073W	PDB1	P32473	366 aa	Known RBP	5.86	□□□□□ -1.47
SNF11	YDR073W	PHO11	P35842	467 aa		5.86	□□□□□ -1.47
SNF11	YDR073W	CMC1	P36064	111 aa		5.86	□□□□□ -1.47
SNF11	YDR073W	YKR073C	P36153	106 aa		5.86	□□□□□ -1.47
SNF11	YDR073W	PHO12	P38693	467 aa		5.86	□□□□□ -1.47
SNF11	YDR073W	YNG2	P38806	282 aa	Known RBP	5.86	□□□□□ -1.47
SNF11	YDR073W	CCT6	P39079	546 aa		5.86	□□□□□ -1.47
SNF11	YDR073W	UBX6	P47049	396 aa		5.86	□□□□□ -1.47
SNF11	YDR073W	PET130	P47065	347 aa		5.86	□□□□□ -1.47
SNF11	YDR073W	MSE1	P48525	536 aa		5.86	□□□□□ -1.47
SNF11	YDR073W	FHN1	P53279	174 aa		5.86	□□□□□ -1.47
SNF11	YDR073W	SPC98	P53540	846 aa		5.86	□□□□□ -1.47
SNF11	YDR073W	MAK10	Q02197	733 aa		5.86	□□□□□ -1.47
SNF11	YDR073W	YPL107W	Q02873	248 aa		5.86	□□□□□ -1.47
SNF11	YDR073W	YDR132C	Q03900	495 aa		5.86	□□□□□ -1.47
SNF11	YDR073W	VTI1	Q04338	217 aa		5.86	□□□□□ -1.47
SNF11	YDR073W	RQC1	Q05468	723 aa	Known RBP	5.86	□□□□□ -1.47
SNF11	YDR073W	YDL086W	Q07505	273 aa		5.86	□□□□□ -1.47
SNF11	YDR073W	FMP40	Q08968	688 aa	Predicted RBP	5.86	□□□□□ -1.47
SNF11	YDR073W	SPE3	Q12074	293 aa	Known RBP	5.86	□□□□□ -1.47
SNF11	YDR073W	YML133C	Q03099	1374 aa		5.85	□□□□□ -1.47
SNF11	YDR073W	YLL067C	Q07888	1374 aa		5.85	□□□□□ -1.47
SNF11	YDR073W	YLL066C	Q99208	1374 aa		5.85	□□□□□ -1.47
SNF11	YDR073W	TRP4	P07285	380 aa	Predicted RBP	5.85	□□□□□ -1.47
SNF11	YDR073W	THR1	P17423	357 aa	Known RBP	5.85	□□□□□ -1.47
SNF11	YDR073W	CDC5	P32562	705 aa		5.85	□□□□□ -1.47
SNF11	YDR073W	SMI1	P32566	505 aa		5.85	□□□□□ -1.47
SNF11	YDR073W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	5.85	□□□□□ -1.47	RIP-Chip
SNF11	YDR073W	SEF1	P34228	1148 aa		5.85	□□□□□ -1.47
SNF11	YDR073W	CCL1	P37366	393 aa		5.85	□□□□□ -1.47
SNF11	YDR073W	TCB2	P48231	1178 aa		5.85	□□□□□ -1.47
SNF11	YDR073W	TWF1	P53250	332 aa		5.85	□□□□□ -1.47
SNF11	YDR073W	IRC13	Q08630	104 aa		5.85	□□□□□ -1.47
SNF11	YDR073W	GLK1	P17709	500 aa	Known RBP	5.84	□□□□□ -1.47
SNF11	YDR073W	ERV1	P27882	189 aa		5.84	□□□□□ -1.47
SNF11	YDR073W	PMT1	P33775	817 aa		5.84	□□□□□ -1.47
SNF11	YDR073W	LAS1	P36146	502 aa	Predicted RBP	5.84	□□□□□ -1.47
SNF11	YDR073W	BUR6	P40096	142 aa		5.84	□□□□□ -1.47
SNF11	YDR073W	EFM4	P40516	257 aa		5.84	□□□□□ -1.47
SNF11	YDR073W	FYV8	P46949	817 aa	Known RBP	5.84	□□□□□ -1.47
SNF11	YDR073W	IRC8	P47046	822 aa		5.84	□□□□□ -1.47
SNF11	YDR073W	RPS7B	P48164	190 aa	Known RBP	5.84	□□□□□ -1.47
SNF11	YDR073W	MNP1	P53163	194 aa	Predicted RBP	5.84	□□□□□ -1.47
SNF11	YDR073W	BOP3	P53958	396 aa		5.84	□□□□□ -1.47
SNF11	YDR073W	ARX1	Q03862	593 aa	Known RBP	5.84	□□□□□ -1.47
SNF11	YDR073W	ARG7	Q04728	441 aa		5.84	□□□□□ -1.47
SNF11	YDR073W	MRI1	Q06489	411 aa	Known RBP	5.84	□□□□□ -1.47
SNF11	YDR073W	SWA2	Q06677	668 aa		5.84	□□□□□ -1.47
SNF11	YDR073W	LUC7	Q07508	261 aa	Predicted RBP	5.84	□□□□□ -1.47
SNF11	YDR073W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	5.84	□□□□□ -1.47	not detected
SNF11	YDR073W	CTF3	Q12748	733 aa		5.84	□□□□□ -1.47
SNF11	YDR073W	CLC1	P17891	233 aa		5.83	□□□□□ -1.48
SNF11	YDR073W	LOT5	P34234	306 aa		5.83	□□□□□ -1.48
SNF11	YDR073W	TCD2	P36101	447 aa	Known RBP	5.83	□□□□□ -1.48
SNF11	YDR073W	RPF2	P36160	344 aa	Known RBP	5.83	□□□□□ -1.48
SNF11	YDR073W	APL3	P38065	1025 aa		5.83	□□□□□ -1.48
SNF11	YDR073W	YHR054C	P38780	354 aa		5.83	□□□□□ -1.48
SNF11	YDR073W	TIF4631	P39935	952 aa	Known RBP	5.83	□□□□□ -1.48
SNF11	YDR073W	FMP52	P40008	231 aa		5.83	□□□□□ -1.48
SNF11	YDR073W	HXT14	P42833	540 aa		5.83	□□□□□ -1.48
SNF11	YDR073W	CAK1	P43568	368 aa	Predicted RBP	5.83	□□□□□ -1.48
SNF11	YDR073W	DLD2	P46681	530 aa	Known RBP	5.83	□□□□□ -1.48
SNF11	YDR073W	YJL163C	P46996	555 aa		5.83	□□□□□ -1.48
SNF11	YDR073W	DIP5	P53388	608 aa		5.83	□□□□□ -1.48
SNF11	YDR073W	DCP2	P53550	970 aa	Known RBP	5.83	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 73.2 ms