RNA–Protein interactions for RNA: YDL115C

IWR1, Transcript of RNA polymerase II transport factor, conserved from yeast to humans, yeast

Gene IWR1, Length 1,062 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IWR1	YDL115C	YIL054W	P40524	105 aa		5.22	□□□□□ -1.57
IWR1	YDL115C	COG6	P53959	839 aa		5.22	□□□□□ -1.57
IWR1	YDL115C	YNL040W	P53960	456 aa	Predicted RBP	5.22	□□□□□ -1.57
IWR1	YDL115C	SHR3	Q02774	210 aa		5.22	□□□□□ -1.57
IWR1	YDL115C	SNU56	Q03782	492 aa	Known RBP	5.22	□□□□□ -1.57
IWR1	YDL115C	TAF9	Q05027	157 aa		5.22	□□□□□ -1.57
IWR1	YDL115C	KAP95	Q06142	861 aa	Known RBP	5.22	□□□□□ -1.57
IWR1	YDL115C	EAF1	Q06337	982 aa		5.22	□□□□□ -1.57
IWR1	YDL115C	VHS3	Q08438	674 aa		5.22	□□□□□ -1.57
IWR1	YDL115C	THI21	Q08975	551 aa		5.22	□□□□□ -1.57
IWR1	YDL115C	FAP7	Q12055	197 aa	Predicted RBP	5.22	□□□□□ -1.57
IWR1	YDL115C	YOR022C	Q12204	715 aa		5.22	□□□□□ -1.57
IWR1	YDL115C	EMP46	Q12396	444 aa		5.22	□□□□□ -1.57
IWR1	YDL115C	KCS1	Q12494	1050 aa		5.22	□□□□□ -1.57
IWR1	YDL115C	YDR524C-B	Q3E6R4	66 aa		5.22	□□□□□ -1.57
IWR1	YDL115C	MOT1	P32333	1867 aa		5.22	□□□□□ -1.57
IWR1	YDL115C	RIF1	P29539	1916 aa		5.21	□□□□□ -1.57
IWR1	YDL115C	ARE1	P25628	610 aa		5.21	□□□□□ -1.58
IWR1	YDL115C	MEI4	P29467	408 aa		5.21	□□□□□ -1.58
IWR1	YDL115C	PMI40	P29952	429 aa	Known RBP	5.21	□□□□□ -1.58
IWR1	YDL115C	ECM32	P32644	1121 aa	Known RBP	5.21	□□□□□ -1.58
IWR1	YDL115C	MRP4	P32902	394 aa		5.21	□□□□□ -1.58
IWR1	YDL115C	YHR020W	P38708	688 aa	Known RBP	5.21	□□□□□ -1.58
IWR1	YDL115C	GGA2	P38817	585 aa	Known RBP	5.21	□□□□□ -1.58
IWR1	YDL115C	TVP23	P38962	199 aa		5.21	□□□□□ -1.58
IWR1	YDL115C	RSP5	P39940	809 aa	Known RBP	5.21	□□□□□ -1.58
IWR1	YDL115C	DSN1	P40568	576 aa		5.21	□□□□□ -1.58
IWR1	YDL115C	YNL320W	P42840	284 aa		5.21	□□□□□ -1.58
IWR1	YDL115C	ATG36	P46983	293 aa		5.21	□□□□□ -1.58
IWR1	YDL115C	MNN11	P46985	422 aa	Known RBP	5.21	□□□□□ -1.58
IWR1	YDL115C	STB4	P50104	949 aa		5.21	□□□□□ -1.58
IWR1	YDL115C	PHO23	P50947	330 aa		5.21	□□□□□ -1.58
IWR1	YDL115C	EXG2	P52911	562 aa		5.21	□□□□□ -1.58
IWR1	YDL115C	RTA1	P53047	317 aa		5.21	□□□□□ -1.58
IWR1	YDL115C	RAI1	P53063	387 aa	Known RBP	5.21	□□□□□ -1.58
IWR1	YDL115C	PUS2	P53167	370 aa		5.21	□□□□□ -1.58
IWR1	YDL115C	SPC98	P53540	846 aa		5.21	□□□□□ -1.58
IWR1	YDL115C	COP1	P53622	1201 aa	Known RBP	5.21	□□□□□ -1.58
IWR1	YDL115C	DOS2	P54858	310 aa		5.21	□□□□□ -1.58
IWR1	YDL115C	STP1	Q00947	519 aa		5.21	□□□□□ -1.58
IWR1	YDL115C	SND1	Q04007	877 aa		5.21	□□□□□ -1.58
IWR1	YDL115C	YDR018C	Q12185	396 aa		5.21	□□□□□ -1.58
IWR1	YDL115C	PKH2	Q12236	1081 aa	Known RBP	5.21	□□□□□ -1.58
IWR1	YDL115C	YML002W	P0CF17	737 aa		5.2	□□□□□ -1.58
IWR1	YDL115C	MSD1	P15179	658 aa	Known RBP	5.2	□□□□□ -1.58
IWR1	YDL115C	SAT4	P25333	603 aa	Known RBP	5.2	□□□□□ -1.58
IWR1	YDL115C	ILV6	P25605	309 aa	Known RBP	5.2	□□□□□ -1.58
IWR1	YDL115C	POT1	P27796	417 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
IWR1	YDL115C	CAP1	P28495	268 aa	Known RBP	5.2	□□□□□ -1.58
IWR1	YDL115C	VPH1	P32563	840 aa	Known RBP	5.2	□□□□□ -1.58
IWR1	YDL115C	TKL2	P33315	681 aa		5.2	□□□□□ -1.58
IWR1	YDL115C	PEX5	P35056	612 aa		5.2	□□□□□ -1.58
IWR1	YDL115C	RRP14	P36080	434 aa	Known RBP	5.2	□□□□□ -1.58
IWR1	YDL115C	AGP2	P38090	596 aa		5.2	□□□□□ -1.58
IWR1	YDL115C	APN2	P38207	520 aa		5.2	□□□□□ -1.58
IWR1	YDL115C	YHR202W	P38887	602 aa		5.2	□□□□□ -1.58
IWR1	YDL115C	REV7	P38927	245 aa		5.2	□□□□□ -1.58
IWR1	YDL115C	VPS41	P38959	992 aa		5.2	□□□□□ -1.58
IWR1	YDL115C	ERP2	P39704	215 aa		5.2	□□□□□ -1.58
IWR1	YDL115C	ALR2	P43553	858 aa		5.2	□□□□□ -1.58
IWR1	YDL115C	TRS85	P46944	698 aa		5.2	□□□□□ -1.58
IWR1	YDL115C	POL31	P46957	487 aa		5.2	□□□□□ -1.58
IWR1	YDL115C	NMD5	P46970	1048 aa		5.2	□□□□□ -1.58
IWR1	YDL115C	PEX31	P53203	462 aa		5.2	□□□□□ -1.58
IWR1	YDL115C	UTP8	P53276	713 aa	Known RBP	5.2	□□□□□ -1.58
IWR1	YDL115C	KTR5	P53966	522 aa	Predicted RBP	5.2	□□□□□ -1.58
IWR1	YDL115C	YMR027W	Q04371	470 aa		5.2	□□□□□ -1.58
IWR1	YDL115C	AAD4	Q07747	329 aa		5.2	□□□□□ -1.58
IWR1	YDL115C	GPM2	Q12008	311 aa		5.2	□□□□□ -1.58
IWR1	YDL115C	VPS54	Q12071	889 aa		5.2	□□□□□ -1.58
IWR1	YDL115C	NPC2	Q12408	173 aa		5.2	□□□□□ -1.58
IWR1	YDL115C	CMD1	P06787	147 aa	Known RBP	5.19	□□□□□ -1.58
IWR1	YDL115C	PEP5	P12868	1029 aa		5.19	□□□□□ -1.58
IWR1	YDL115C	EST1	P17214	699 aa	Predicted RBP	5.19	□□□□□ -1.58
IWR1	YDL115C	GAL11	P19659	1081 aa		5.19	□□□□□ -1.58
IWR1	YDL115C	KAR4	P25583	335 aa		5.19	□□□□□ -1.58
IWR1	YDL115C	MGT1	P26188	188 aa		5.19	□□□□□ -1.58
IWR1	YDL115C	DEP1	P31385	405 aa		5.19	□□□□□ -1.58
IWR1	YDL115C	RAD5	P32849	1169 aa	Predicted RBP	5.19	□□□□□ -1.58
IWR1	YDL115C	HSL7	P38274	827 aa		5.19	□□□□□ -1.58
IWR1	YDL115C	DIA4	P38705	446 aa	Predicted RBP	5.19	□□□□□ -1.58
IWR1	YDL115C	CKB2	P38930	258 aa		5.19	□□□□□ -1.58
IWR1	YDL115C	FLC2	P39719	783 aa		5.19	□□□□□ -1.58
IWR1	YDL115C	SAW1	P39735	261 aa		5.19	□□□□□ -1.58
IWR1	YDL115C	MMF1	P40185	145 aa	Known RBP	5.19	□□□□□ -1.58
IWR1	YDL115C	CTK3	P46963	296 aa	Predicted RBP	5.19	□□□□□ -1.58
IWR1	YDL115C	YJR079W	P47126	109 aa		5.19	□□□□□ -1.58
IWR1	YDL115C	YGR283C	P53336	341 aa	Predicted RBP	5.19	□□□□□ -1.58
IWR1	YDL115C	MRS2	Q01926	470 aa		5.19	□□□□□ -1.58
IWR1	YDL115C	DIS3	Q08162	1001 aa	Known RBP	5.19	□□□□□ -1.58
IWR1	YDL115C	PUS9	Q12069	462 aa		5.19	□□□□□ -1.58
IWR1	YDL115C	SPE3	Q12074	293 aa	Known RBP	5.19	□□□□□ -1.58
IWR1	YDL115C	NBP2	Q12163	236 aa		5.19	□□□□□ -1.58
IWR1	YDL115C	YLL056C	Q12177	298 aa		5.19	□□□□□ -1.58
IWR1	YDL115C	ATP1	P07251	545 aa	Known RBP	5.18	□□□□□ -1.58
IWR1	YDL115C	CDC24	P11433	854 aa	Predicted RBP	5.18	□□□□□ -1.58
IWR1	YDL115C	OAF3	P36023	863 aa		5.18	□□□□□ -1.58
IWR1	YDL115C	SPC42	P36094	363 aa		5.18	□□□□□ -1.58
IWR1	YDL115C	PRM9	P39551	298 aa		5.18	□□□□□ -1.58
IWR1	YDL115C	SCC4	P40090	624 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms