RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W SQS1P53866 767 aaKnown RBP2.3□□□□□ -2.04
MCD1YDL003W PTA1Q01329 785 aaPredicted RBP2.3□□□□□ -2.04
MCD1YDL003W GTB1Q04924 702 aa2.3□□□□□ -2.04
MCD1YDL003W SCW10Q04951 389 aa2.3□□□□□ -2.04
MCD1YDL003W NNT1Q05874 261 aa2.3□□□□□ -2.04
MCD1YDL003W YLR287CQ05881 355 aa2.3□□□□□ -2.04
MCD1YDL003W OPY2Q06810 360 aa2.3□□□□□ -2.04
MCD1YDL003W SYO1Q07395 620 aa2.3□□□□□ -2.04
MCD1YDL003W NOP6Q07623 225 aaKnown RBP2.3□□□□□ -2.04
MCD1YDL003W GPN2Q08726 347 aaPredicted RBP2.3□□□□□ -2.04
MCD1YDL003W RKM1Q08961 583 aaPredicted RBP2.3□□□□□ -2.04
MCD1YDL003W TAF10Q12030 206 aa2.3□□□□□ -2.04
MCD1YDL003W SCM3Q12334 223 aa2.3□□□□□ -2.04
MCD1YDL003W ADE3P07245 946 aaKnown RBP2.29□□□□□ -2.04
MCD1YDL003W LPD1P09624 499 aaKnown RBP2.29□□□□□ -2.04
MCD1YDL003W MTF2P10849 440 aa2.29□□□□□ -2.04
MCD1YDL003W RSR1P13856 272 aa2.29□□□□□ -2.04
MCD1YDL003W MSS116P15424 664 aaKnown RBP2.29□□□□□ -2.04
MCD1YDL003W VMA2P16140 517 aaKnown RBP2.29□□□□□ -2.04
MCD1YDL003W VPS1P21576 704 aaKnown RBP2.29□□□□□ -2.04
MCD1YDL003W MRPL25P23369 157 aa2.29□□□□□ -2.04
MCD1YDL003W DPB2P24482 689 aaPredicted RBP2.29□□□□□ -2.04
MCD1YDL003W MRE11P32829 692 aa2.29□□□□□ -2.04
MCD1YDL003W YKR015CP36111 568 aa2.29□□□□□ -2.04
MCD1YDL003W DBP7P36120 742 aaKnown RBP2.29□□□□□ -2.04
MCD1YDL003W UBP13P38187 747 aa2.29□□□□□ -2.04
MCD1YDL003W UTP18P40362 594 aaPredicted RBP2.29□□□□□ -2.04
MCD1YDL003W SPO22P40511 975 aa2.29□□□□□ -2.04
MCD1YDL003W BFA1P47113 574 aa2.29□□□□□ -2.04
MCD1YDL003W OCA1P50946 238 aaPredicted RBP2.29□□□□□ -2.04
MCD1YDL003W RRP46P53256 223 aaPredicted RBP2.29□□□□□ -2.04
MCD1YDL003W CWC25P53854 179 aaKnown RBP2.29□□□□□ -2.04
MCD1YDL003W IPI3P53877 555 aa2.29□□□□□ -2.04
MCD1YDL003W TMA20P89886 181 aaPredicted RBP2.29□□□□□ -2.04
MCD1YDL003W FCP1Q03254 732 aa2.29□□□□□ -2.04
MCD1YDL003W CSI1Q04368 295 aa2.29□□□□□ -2.04
MCD1YDL003W SSQ1Q05931 657 aaPredicted RBP2.29□□□□□ -2.04
MCD1YDL003W YLH47Q06493 454 aa2.29□□□□□ -2.04
MCD1YDL003W BSP1Q06604 576 aa2.29□□□□□ -2.04
MCD1YDL003W CSR1Q06705 408 aaKnown RBP2.29□□□□□ -2.04
MCD1YDL003W NDD1Q08887 554 aa2.29□□□□□ -2.04
MCD1YDL003W RIO1Q12196 484 aaKnown RBP2.29□□□□□ -2.04
MCD1YDL003W HTZ1Q12692 134 aaKnown RBP2.29□□□□□ -2.04
MCD1YDL003W ADE6P38972 1358 aaKnown RBP2.29□□□□□ -2.04
MCD1YDL003W LTE1P07866 1435 aa2.29□□□□□ -2.04
MCD1YDL003W MLP1Q02455 1875 aaKnown RBP2.29□□□□□ -2.04
MCD1YDL003W CMD1P06787 147 aaKnown RBP2.28□□□□□ -2.04
MCD1YDL003W ADH4P10127 382 aa2.28□□□□□ -2.04
MCD1YDL003W PHO13P19881 312 aa2.28□□□□□ -2.04
MCD1YDL003W IME1P21190 360 aa2.28□□□□□ -2.04
MCD1YDL003W CNE1P27825 502 aa2.28□□□□□ -2.04
MCD1YDL003W PAP1P29468 568 aaKnown RBP2.28□□□□□ -2.04
MCD1YDL003W VMA22P38784 181 aa2.28□□□□□ -2.04
MCD1YDL003W SMF1P38925 575 aa2.28□□□□□ -2.04
MCD1YDL003W SMC2P38989 1170 aaKnown RBP2.28□□□□□ -2.04
MCD1YDL003W CCT2P39076 527 aaKnown RBP2.28□□□□□ -2.04
MCD1YDL003W YHB1P39676 399 aaKnown RBP2.28□□□□□ -2.04
MCD1YDL003W MAM1P40065 302 aa2.28□□□□□ -2.04
MCD1YDL003W YIL024CP40543 189 aa2.28□□□□□ -2.04
MCD1YDL003W BST1P43571 1029 aa2.28□□□□□ -2.04
MCD1YDL003W MDV1P47025 714 aa2.28□□□□□ -2.04
MCD1YDL003W TMA22P47089 198 aaPredicted RBP2.28□□□□□ -2.04
MCD1YDL003W YJR039WP47107 1121 aa2.28□□□□□ -2.04
MCD1YDL003W HAM1P47119 197 aaKnown RBP2.28□□□□□ -2.04
MCD1YDL003W SRB7P47822 140 aa2.28□□□□□ -2.04
MCD1YDL003W IMD4P50094 524 aaKnown RBP2.28□□□□□ -2.04
MCD1YDL003W MPS2P53159 387 aa2.28□□□□□ -2.04
MCD1YDL003W MDR1P53258 950 aa2.28□□□□□ -2.04
MCD1YDL003W DCP2P53550 970 aaKnown RBP2.28□□□□□ -2.04
MCD1YDL003W FYV6P53913 173 aa2.28□□□□□ -2.04
MCD1YDL003W SRL4Q03085 281 aa2.28□□□□□ -2.04
MCD1YDL003W MMT1Q03218 510 aa2.28□□□□□ -2.04
MCD1YDL003W YMR210WQ03649 449 aa2.28□□□□□ -2.04
MCD1YDL003W SYF1Q04048 859 aaPredicted RBP2.28□□□□□ -2.04
MCD1YDL003W SNA4Q07549 140 aa2.28□□□□□ -2.04
MCD1YDL003W DNL4Q08387 944 aaPredicted RBP2.28□□□□□ -2.04
MCD1YDL003W APC5Q08683 685 aa2.28□□□□□ -2.04
MCD1YDL003W RSA1Q08932 381 aa2.28□□□□□ -2.04
MCD1YDL003W CDC53Q12018 815 aaKnown RBP2.28□□□□□ -2.04
MCD1YDL003W RRP6Q12149 733 aaKnown RBP2.28□□□□□ -2.04
MCD1YDL003W TIP41Q12199 356 aa2.28□□□□□ -2.04
MCD1YDL003W RDL1Q12305 139 aaKnown RBP2.28□□□□□ -2.04
MCD1YDL003W MDM12Q92328 271 aa2.28□□□□□ -2.04
MCD1YDL003W SNT2P53127 1403 aa2.28□□□□□ -2.04
MCD1YDL003W CDC25P04821 1589 aa2.28□□□□□ -2.04
MCD1YDL003W CDC31P06704 161 aaKnown RBP2.28□□□□□ -2.05
MCD1YDL003W HMG1P12683 1054 aa2.28□□□□□ -2.05
MCD1YDL003W CKI1P20485 582 aa2.28□□□□□ -2.05
MCD1YDL003W UBA1P22515 1024 aaKnown RBP2.28□□□□□ -2.05
MCD1YDL003W RPS5P26783 225 aaKnown RBP2.28□□□□□ -2.05
MCD1YDL003W SEC65P29478 273 aa2.28□□□□□ -2.05
MCD1YDL003W ACP1P32463 125 aa2.28□□□□□ -2.05
MCD1YDL003W GRX4P32642 244 aa2.28□□□□□ -2.05
MCD1YDL003W BMH2P34730 273 aaKnown RBP2.28□□□□□ -2.05
MCD1YDL003W OAF3P36023 863 aa2.28□□□□□ -2.05
MCD1YDL003W VPS51P36116 164 aa2.28□□□□□ -2.05
MCD1YDL003W ADE17P38009 592 aaKnown RBP2.28□□□□□ -2.05
MCD1YDL003W MAL33P38157 468 aa2.28□□□□□ -2.05
MCD1YDL003W FCY21P40039 528 aa2.28□□□□□ -2.05
MCD1YDL003W GCD10P41814 478 aa2.28□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 36.8 ms