RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTG3	YBL103C	FMP42	Q04991	504 aa		4.62	□□□□□ -1.67
RTG3	YBL103C	GPN2	Q08726	347 aa	Predicted RBP	4.62	□□□□□ -1.67
RTG3	YBL103C	APL5	Q08951	932 aa	Known RBP	4.62	□□□□□ -1.67
RTG3	YBL103C	PET111	P08468	800 aa		4.62	□□□□□ -1.67
RTG3	YBL103C	STE50	P25344	346 aa		4.62	□□□□□ -1.67
RTG3	YBL103C	NUP120	P35729	1037 aa		4.62	□□□□□ -1.67
RTG3	YBL103C	RPT2	P40327	437 aa	Known RBP	4.62	□□□□□ -1.67
RTG3	YBL103C	PSP1	P50896	841 aa	Known RBP	4.62	□□□□□ -1.67
RTG3	YBL103C	YGL260W	P53056	76 aa		4.62	□□□□□ -1.67
RTG3	YBL103C	CRN1	Q06440	651 aa		4.62	□□□□□ -1.67
RTG3	YBL103C	YOR111W	Q99210	232 aa		4.62	□□□□□ -1.67
RTG3	YBL103C	SPO16	P17122	198 aa		4.61	□□□□□ -1.67
RTG3	YBL103C	RKM3	P38222	552 aa		4.61	□□□□□ -1.67
RTG3	YBL103C	HOS2	P53096	452 aa	Predicted RBP	4.61	□□□□□ -1.67
RTG3	YBL103C	YLR281C	Q05863	155 aa		4.61	□□□□□ -1.67
RTG3	YBL103C	UTP21	Q06078	939 aa	Predicted RBP	4.61	□□□□□ -1.67
RTG3	YBL103C	PHO81	P17442	1178 aa		4.6	□□□□□ -1.67
RTG3	YBL103C	TKL1	P23254	680 aa	Known RBP	4.6	□□□□□ -1.67
RTG3	YBL103C	PPZ1	P26570	692 aa		4.6	□□□□□ -1.67
RTG3	YBL103C	LHS1	P36016	881 aa		4.6	□□□□□ -1.67
RTG3	YBL103C	RTT107	P38850	1070 aa		4.6	□□□□□ -1.67
RTG3	YBL103C	IML2	P47031	731 aa		4.6	□□□□□ -1.67
RTG3	YBL103C	YMR254C	Q04838	102 aa		4.6	□□□□□ -1.67
RTG3	YBL103C	COX17	Q12287	69 aa		4.6	□□□□□ -1.67
RTG3	YBL103C	EFM2	P38347	419 aa		4.59	□□□□□ -1.67
RTG3	YBL103C	PSF2	P40359	213 aa		4.59	□□□□□ -1.67
RTG3	YBL103C	YNL234W	P53857	426 aa		4.59	□□□□□ -1.67
RTG3	YBL103C	YMR317W	Q04893	1140 aa		4.59	□□□□□ -1.67
RTG3	YBL103C	YTH1	Q06102	208 aa	Predicted RBP	4.59	□□□□□ -1.67
RTG3	YBL103C	PCD1	Q12524	340 aa		4.59	□□□□□ -1.67
RTG3	YBL103C	MRX1	P40050	688 aa		4.58	□□□□□ -1.68
RTG3	YBL103C	SWP82	P43554	623 aa		4.58	□□□□□ -1.68
RTG3	YBL103C	MCP2	Q06567	569 aa		4.58	□□□□□ -1.68
RTG3	YBL103C	APA1	P16550	321 aa	Known RBP	4.57	□□□□□ -1.68
RTG3	YBL103C	HNM1	P19807	563 aa		4.57	□□□□□ -1.68
RTG3	YBL103C	SOF1	P33750	489 aa	Known RBP	4.57	□□□□□ -1.68
RTG3	YBL103C	NTR2	P36118	322 aa	Predicted RBP	4.57	□□□□□ -1.68
RTG3	YBL103C	ACA1	P39970	489 aa		4.57	□□□□□ -1.68
RTG3	YBL103C	CTK2	P46962	323 aa		4.57	□□□□□ -1.68
RTG3	YBL103C	COG1	P53079	417 aa		4.57	□□□□□ -1.68
RTG3	YBL103C	SGF73	P53165	657 aa		4.57	□□□□□ -1.68
RTG3	YBL103C	ARC35	P53731	342 aa	Known RBP	4.57	□□□□□ -1.68
RTG3	YBL103C	CSL4	P53859	292 aa	Predicted RBP	4.57	□□□□□ -1.68
RTG3	YBL103C	YNL181W	P53878	407 aa		4.57	□□□□□ -1.68
RTG3	YBL103C	SMA1	Q02651	245 aa		4.57	□□□□□ -1.68
RTG3	YBL103C	TMA16	Q08687	178 aa		4.57	□□□□□ -1.68
RTG3	YBL103C	MGR1	P25573	417 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	PDR3	P33200	976 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	FMP46	P36141	133 aa	Known RBP	4.56	□□□□□ -1.68
RTG3	YBL103C	MRPL36	P36531	177 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	AAP1	P37898	856 aa	Known RBP	4.56	□□□□□ -1.68
RTG3	YBL103C	NPR3	P38742	1146 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	BZZ1	P38822	633 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	CIA1	Q05583	330 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	PHO2	P07269	559 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	NUC1	P08466	329 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	TY2A-LR1	P0C2J4	438 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	TY2A-F	P0CX61	438 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	TY2A-GR2	P0CX62	438 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	RAP1	P11938	827 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	TY2A-C	P25383	438 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	YCL049C	P25577	312 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	HXT9	P40885	567 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	ASE1	P50275	885 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	YTP1	P53584	459 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
RTG3	YBL103C	TY2A-DR2	Q03483	438 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	ARP10	Q04549	284 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	TAH18	Q12181	623 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	TY2A-B	Q12260	438 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	TY2A-OR2	Q12293	438 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	TY2A-DR1	Q12392	438 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	TY2A-OR1	Q12439	438 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	TY2A-DR3	Q99303	438 aa		4.56	□□□□□ -1.68
RTG3	YBL103C	CDC23	P16522	626 aa		4.55	□□□□□ -1.68
RTG3	YBL103C	MSM1	P22438	575 aa		4.55	□□□□□ -1.68
RTG3	YBL103C	SAC1	P32368	623 aa	Known RBP	4.55	□□□□□ -1.68
RTG3	YBL103C	SEC31	P38968	1273 aa	Known RBP	4.55	□□□□□ -1.68
RTG3	YBL103C	ECM10	P39987	644 aa		4.55	□□□□□ -1.68
RTG3	YBL103C	RSM28	Q03430	361 aa		4.55	□□□□□ -1.68
RTG3	YBL103C	TPK1	P06244	397 aa		4.54	□□□□□ -1.68
RTG3	YBL103C	RAD24	P32641	659 aa		4.54	□□□□□ -1.68
RTG3	YBL103C	YPK3	P38070	525 aa		4.54	□□□□□ -1.68
RTG3	YBL103C	RFC1	P38630	861 aa	Known RBP	4.54	□□□□□ -1.68
RTG3	YBL103C	YFR020W	P43600	232 aa		4.54	□□□□□ -1.68
RTG3	YBL103C	PAP2	P53632	584 aa	Known RBP	4.54	□□□□□ -1.68
RTG3	YBL103C	EKI1	Q03764	534 aa		4.54	□□□□□ -1.68
RTG3	YBL103C	YOL057W	Q08225	711 aa		4.54	□□□□□ -1.68
RTG3	YBL103C	YMR230W-A	Q3E7B5	62 aa		4.54	□□□□□ -1.68
RTG3	YBL103C	EDE1	P34216	1381 aa		4.54	□□□□□ -1.68
RTG3	YBL103C	SEC1	P30619	724 aa	Known RBP	4.53	□□□□□ -1.68
RTG3	YBL103C	IFA38	P38286	347 aa		4.53	□□□□□ -1.68
RTG3	YBL103C	MRPL13	Q02204	264 aa		4.53	□□□□□ -1.68
RTG3	YBL103C	FCP1	Q03254	732 aa		4.53	□□□□□ -1.68
RTG3	YBL103C	GUK1	P15454	187 aa	Known RBP	4.52	□□□□□ -1.69
RTG3	YBL103C	SRB5	P32585	307 aa		4.52	□□□□□ -1.69
RTG3	YBL103C	ATG27	P46989	271 aa		4.52	□□□□□ -1.69
RTG3	YBL103C	MAK10	Q02197	733 aa		4.52	□□□□□ -1.69
RTG3	YBL103C	CTL1	Q03220	320 aa	Known RBP	4.52	□□□□□ -1.69
RTG3	YBL103C	TIP41	Q12199	356 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 58 ms