RNA–Protein interactions for RNA: YOR373W

NUD1, Transcript of Component of the spindle pole body outer plaque, yeast

Gene NUD1, Length 2,556 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUD1	YOR373W	RPC25	P35718	212 aa		5.7	□□□□□ -1.5
NUD1	YOR373W	YBR238C	P38330	731 aa	Known RBP	5.7	□□□□□ -1.5
NUD1	YOR373W	BIT2	P38346	545 aa		5.7	□□□□□ -1.5
NUD1	YOR373W	PEX18	P38855	283 aa		5.7	□□□□□ -1.5
NUD1	YOR373W	RTT101	P47050	842 aa		5.7	□□□□□ -1.5
NUD1	YOR373W	YML082W	Q04533	649 aa	Known RBP	5.7	□□□□□ -1.5
NUD1	YOR373W	TAF9	Q05027	157 aa		5.7	□□□□□ -1.5
NUD1	YOR373W	HRD3	Q05787	833 aa		5.7	□□□□□ -1.5
NUD1	YOR373W	ECM38	Q05902	660 aa	Predicted RBP	5.7	□□□□□ -1.5
NUD1	YOR373W	GRX8	Q05926	109 aa		5.7	□□□□□ -1.5
NUD1	YOR373W	RCL1	Q08096	367 aa	Predicted RBP	5.7	□□□□□ -1.5
NUD1	YOR373W	FUS1	P11710	512 aa		5.7	□□□□□ -1.5
NUD1	YOR373W	RPB4	P20433	221 aa	Predicted RBP	5.7	□□□□□ -1.5
NUD1	YOR373W	SGF29	P25554	259 aa		5.7	□□□□□ -1.5
NUD1	YOR373W	FUN30	P31380	1131 aa		5.7	□□□□□ -1.5
NUD1	YOR373W	YKL097C	P34245	136 aa		5.7	□□□□□ -1.5
NUD1	YOR373W	AVT2	P39981	480 aa		5.7	□□□□□ -1.5
NUD1	YOR373W	CHS6	P40955	746 aa		5.7	□□□□□ -1.5
NUD1	YOR373W	COP1	P53622	1201 aa	Known RBP	5.7	□□□□□ -1.5
NUD1	YOR373W	GPD1	Q00055	391 aa	Known RBP	5.7	□□□□□ -1.5
NUD1	YOR373W	YLR345W	Q06137	509 aa		5.7	□□□□□ -1.5
NUD1	YOR373W	SVS1	Q12254	260 aa		5.7	□□□□□ -1.5
NUD1	YOR373W	HBN1	Q96VH4	193 aa		5.7	□□□□□ -1.5
NUD1	YOR373W	RPB2	P08518	1224 aa	Known RBP	5.69	□□□□□ -1.5
NUD1	YOR373W	SEC23	P15303	768 aa	Known RBP	5.69	□□□□□ -1.5
NUD1	YOR373W	TUP1	P16649	713 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	RAM1	P22007	431 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	MIH1	P23748	554 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	DBF4	P32325	704 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	ERG3	P32353	365 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	SMC1	P32908	1225 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	XRS2	P33301	854 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	SGE1	P33335	543 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	MRPL10	P36520	322 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	ECM2	P38241	364 aa	Known RBP	5.69	□□□□□ -1.5
NUD1	YOR373W	DPH1	P40487	425 aa	Known RBP	5.69	□□□□□ -1.5
NUD1	YOR373W	SNZ3	P43545	298 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	SNZ2	P53824	298 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	YNL247W	P53852	767 aa	Known RBP	5.69	□□□□□ -1.5
NUD1	YOR373W	MTD1	Q02046	320 aa	Known RBP	5.69	□□□□□ -1.5
NUD1	YOR373W	RTN1	Q04947	295 aa	Known RBP	5.69	□□□□□ -1.5
NUD1	YOR373W	BLS1	Q06071	122 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	HDA3	Q06623	655 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	NFI1	Q12216	726 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	CCH1	P50077	2039 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	CET1	O13297	549 aa	Predicted RBP	5.69	□□□□□ -1.5
NUD1	YOR373W	SEM1	O94742	89 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	TOP3	P13099	656 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	LRE1	P25579	583 aa	Known RBP	5.69	□□□□□ -1.5
NUD1	YOR373W	PRP19	P32523	503 aa	Known RBP	5.69	□□□□□ -1.5
NUD1	YOR373W	LYS9	P38999	446 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	HEM14	P40012	539 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	YJL068C	P40363	299 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	CDC1	P40986	491 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	GZF3	P42944	551 aa	Known RBP	5.69	□□□□□ -1.5
NUD1	YOR373W	MOT3	P54785	490 aa	Known RBP	5.69	□□□□□ -1.5
NUD1	YOR373W	DPB4	Q04603	196 aa	Known RBP	5.69	□□□□□ -1.5
NUD1	YOR373W	PMT7	Q06644	662 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	AIM39	Q08223	395 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	VHS3	Q08438	674 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	YOL114C	Q12322	202 aa		5.69	□□□□□ -1.5
NUD1	YOR373W	MEX67	Q99257	599 aa	Known RBP	5.69	□□□□□ -1.5
NUD1	YOR373W	HOM2	P13663	365 aa	Known RBP	5.68	□□□□□ -1.5
NUD1	YOR373W	PDC6	P26263	563 aa	Known RBP	5.68	□□□□□ -1.5
NUD1	YOR373W	CSE1	P33307	960 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	MDL1	P33310	695 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	YBR053C	P38235	358 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	SPT8	P38915	602 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	CKB2	P38930	258 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	LTP1	P40347	161 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	NAS2	P40555	220 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	YJR098C	P47139	656 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	SCY1	P53009	804 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	YGL140C	P53120	1219 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	FLC3	P53121	802 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	YGR111W	P53265	400 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	ARE2	P53629	642 aa	Known RBP	5.68	□□□□□ -1.5
NUD1	YOR373W	DSL1	P53847	754 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	YDR222W	Q04925	415 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	APL4	Q12028	832 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
NUD1	YOR373W	PYC1	P11154	1178 aa	Known RBP	5.68	□□□□□ -1.5
NUD1	YOR373W	PRP9	P19736	530 aa	Known RBP	5.68	□□□□□ -1.5
NUD1	YOR373W	KIN3	P22209	435 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	HBS1	P32769	611 aa	Known RBP	5.68	□□□□□ -1.5
NUD1	YOR373W	SHM2	P37291	469 aa	Known RBP	5.68	□□□□□ -1.5
NUD1	YOR373W	SHM1	P37292	490 aa	Predicted RBP	5.68	□□□□□ -1.5
NUD1	YOR373W	NNF2	P53253	936 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	YPL071C	Q02864	156 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	RRN5	Q02983	363 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	PIR3	Q03180	325 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	GCN5	Q03330	439 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	DDC1	Q08949	612 aa		5.68	□□□□□ -1.5
NUD1	YOR373W	CWC2	Q12046	339 aa	Predicted RBP	5.68	□□□□□ -1.5
NUD1	YOR373W	BI2	P03873	423 aa		5.67	□□□□□ -1.5
NUD1	YOR373W	BI4	P03879	638 aa		5.67	□□□□□ -1.5
NUD1	YOR373W	RPS14A	P06367	137 aa	Known RBP	5.67	□□□□□ -1.5
NUD1	YOR373W	SFL1	P20134	766 aa		5.67	□□□□□ -1.5
NUD1	YOR373W	RPN2	P32565	945 aa	Known RBP	5.67	□□□□□ -1.5
NUD1	YOR373W	SEG2	P34250	1132 aa		5.67	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 130.6 ms